Stochastic Calculus of Wrapped Compartments von Coppo, Mario, Damiani, Ferruccio, Drocco, Maurizio, Grassi, Elena, Troina, Angelo

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Practical parallelization of scientific applications with OpenMP, OpenACC and MPI von Aldinucci, Marco, Cesare, Valentina, Colonnelli, Iacopo, Martinelli, Alberto Riccardo, Mittone, Gianluca, Cantalupo, Barbara, Cavazzoni, Carlo, Drocco, Maurizio

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PiCo: High-performance data analytics pipelines in modern C++ von Misale, Claudia, Drocco, Maurizio, Tremblay, Guy, Martinelli, Alberto R., Aldinucci, Marco

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Modelling Spatial Interactions in the Arbuscular Mycorrhizal Symbiosis using the Calculus of Wrapped Compartments von Calcagno, Cristina, Coppo, Mario, Damiani, Ferruccio, Drocco, Maurizio, Sciacca, Eva, Spinella, Salvatore, Troina, Angelo

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Hybrid Calculus of Wrapped Compartments von Coppo, Mario, Damiani, Ferruccio, Drocco, Maurizio, Grassi, Elena, Sciacca, Eva, Spinella, Salvatore, Troina, Angelo

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Parallel visual data restoration on multi-GPGPUs using stencil-reduce pattern von Aldinucci, Marco, Pezzi, Guilherme Peretti, Drocco, Maurizio, Spampinato, Concetto, Torquati, Massimo

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NuChart-II: The road to a fast and scalable tool for Hi-C data analysis von Tordini, Fabio, Drocco, Maurizio, Misale, Claudia, Milanesi, Luciano, Liò, Pietro, Merelli, Ivan, Torquati, Massimo, Aldinucci, Marco

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Parallel stochastic systems biology in the cloud von Aldinucci, Marco, Torquati, Massimo, Spampinato, Concetto, Drocco, Maurizio, Misale, Claudia, Calcagno, Cristina, Coppo, Mario

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Simulation techniques for the calculus of wrapped compartments von Coppo, Mario, Damiani, Ferruccio, Drocco, Maurizio, Grassi, Elena, Sciacca, Eva, Spinella, Salvatore, Troina, Angelo

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Integrating multi-omic features exploiting Chromosome Conformation Capture data von Merelli, Ivan, Tordini, Fabio, Drocco, Maurizio, Aldinucci, Marco, Liò, Pietro, Milanesi, Luciano

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On Designing Multicore-Aware Simulators for Systems Biology Endowed with OnLine Statistics von Torquati, Massimo, Troina, Angelo, Aldinucci, Marco, Spinella, Salvatore, Sciacca, Eva, Drocco, Maurizio, Calcagno, Cristina, Coppo, Mario, Damiani, Ferruccio

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Towards Standard Kubernetes Scheduling Interfaces for Converged Computing von Misale, Claudia, Milroy, Daniel J., Gutierrez, Carlos Eduardo Arango, Drocco, Maurizio, Herbein, Stephen, Ahn, Dong H., Kaiser, Zvonko, Park, Yoonho

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PiCo: A Novel Approach to Stream Data Analytics von Misale, Claudia, Drocco, Maurizio, Tremblay, Guy, Aldinucci, Marco

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Pushing the boundaries of parallel Deep Learning -- A practical approach von Viviani, Paolo, Drocco, Maurizio, Aldinucci, Marco

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NuChart-II: A Graph-Based Approach for Analysis and Interpretation of Hi-C Data von Tordini, Fabio, Drocco, Maurizio, Merelli, Ivan, Milanesi, Luciano, Liò, Pietro, Aldinucci, Marco

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Modelling Biological and Ecological Systems with the Calculus of Wrapped Compartments von Aldinucci, Marco, Bioglio, Livio, Calcagno, Cristina, Coppo, Mario, Damiani, Ferruccio, Drocco, Maurizio, Grassi, Elena, Ramón, Pablo, Sciacca, Eva, Spinella, Salvatore, Troina, Angelo

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A Formal Semantics for Data Analytics Pipelines von Drocco, Maurizio, Misale, Claudia, Tremblay, Guy, Aldinucci, Marco

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On Parallelizing On-Line Statistics for Stochastic Biological Simulations von Aldinucci, Marco, Coppo, Mario, Damiani, Ferruccio, Drocco, Maurizio, Sciacca, Eva, Spinella, Salvatore, Torquati, Massimo, Troina, Angelo

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A Comparison of Big Data Frameworks on a Layered Dataflow Model von Misale, Claudia, Drocco, Maurizio, Aldinucci, Marco, Tremblay, Guy

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Modelling Ammonium Transporters in Arbuscular Mycorrhiza Symbiosis von Coppo, Mario, Damiani, Ferruccio, Drocco, Maurizio, Grassi, Elena, Guether, Mike, Troina, Angelo

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