Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci von Lilue, Jingtao, Doran, Anthony G., Fiddes, Ian T., Abrudan, Monica, Armstrong, Joel, Bennett, Ruth, Chow, William, Collins, Joanna, Collins, Stephan, Czechanski, Anne, Danecek, Petr, Diekhans, Mark, Dolle, Dirk-Dominik, Dunn, Matt, Durbin, Richard, Earl, Dent, Ferguson-Smith, Anne, Flicek, Paul, Flint, Jonathan, Frankish, Adam, Fu, Beiyuan, Gerstein, Mark, Gilbert, James, Goodstadt, Leo, Harrow, Jennifer, Howe, Kerstin, Ibarra-Soria, Ximena, Kolmogorov, Mikhail, Lelliott, Chris J., Logan, Darren W., Loveland, Jane, Mathews, Clayton E., Mott, Richard, Muir, Paul, Nachtweide, Stefanie, Navarro, Fabio C. P., Odom, Duncan T., Park, Naomi, Pelan, Sarah, Pham, Son K., Quail, Mike, Reinholdt, Laura, Romoth, Lars, Shirley, Lesley, Sisu, Cristina, Sjoberg-Herrera, Marcela, Stanke, Mario, Steward, Charles, Thomas, Mark, Threadgold, Glen, Thybert, David, Torrance, James, Wong, Kim, Wood, Jonathan, Yalcin, Binnaz, Yang, Fengtang, Adams, David J., Paten, Benedict, Keane, Thomas M.

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A novel function of the proneural factor Ascl1 in progenitor proliferation identified by genome-wide characterization of its targets von Castro, Diogo S, Martynoga, Ben, Parras, Carlos, Ramesh, Vidya, Pacary, Emilie, Johnston, Caroline, Drechsel, Daniela, Lebel-Potter, Mélanie, Garcia, Laura Galinanes, Hunt, Charles, Dolle, Dirk, Bithell, Angela, Ettwiller, Laurence, Buckley, Noel, Guillemot, François

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Ascl1 Coordinately Regulates Gene Expression and the Chromatin Landscape during Neurogenesis von Raposo, Alexandre A.S.F., Vasconcelos, Francisca F., Drechsel, Daniela, Marie, Corentine, Johnston, Caroline, Dolle, Dirk, Bithell, Angela, Gillotin, Sébastien, van den Berg, Debbie L.C., Ettwiller, Laurence, Flicek, Paul, Crawford, Gregory E., Parras, Carlos M., Berninger, Benedikt, Buckley, Noel J., Guillemot, François, Castro, Diogo S.

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Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes von Dolle, Dirk D, Liu, Zhicheng, Cotten, Matthew, Simpson, Jared T, Iqbal, Zamin, Durbin, Richard, McCarthy, Shane A, Keane, Thomas M

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The light responsive transcriptome of the zebrafish: function and regulation von Weger, Benjamin D, Sahinbas, Meltem, Otto, Georg W, Mracek, Philipp, Armant, Olivier, Dolle, Dirk, Lahiri, Kajori, Vallone, Daniela, Ettwiller, Laurence, Geisler, Robert, Foulkes, Nicholas S, Dickmeis, Thomas

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A novel evolutionary conserved mechanism of RNA stability regulates synexpression of primordial germ cell-specific genes prior to the sex-determination stage in medaka von Herpin, Amaury, Schmidt, Cornelia, Kneitz, Susanne, Gobé, Clara, Regensburger, Martina, Le Cam, Aurélie, Montfort, Jérome, Adolfi, Mateus C, Lillesaar, Christina, Wilhelm, Dagmar, Kraeussling, Michael, Mourot, Brigitte, Porcon, Béatrice, Pannetier, Maëlle, Pailhoux, Eric, Ettwiller, Laurence, Dolle, Dirk, Guiguen, Yann, Schartl, Manfred

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Genomic and phenotypic characterization of a wild medaka population: towards the establishment of an isogenic population genetic resource in fish von Spivakov, Mikhail, Auer, Thomas O, Peravali, Ravindra, Dunham, Ian, Dolle, Dirk, Fujiyama, Asao, Toyoda, Atsushi, Aizu, Tomoyuki, Minakuchi, Yohei, Loosli, Felix, Naruse, Kiyoshi, Birney, Ewan, Wittbrodt, Joachim

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Handling Permutation in Sequence Comparison: Genome-Wide Enhancer Prediction in Vertebrates by a Novel Non-Linear Alignment Scoring Principle von Dolle, Dirk, Mateo, Juan L, Eichenlaub, Michael P, Sinn, Rebecca, Reinhardt, Robert, Höckendorf, Burkhard, Inoue, Daigo, Centanin, Lazaro, Ettwiller, Laurence, Wittbrodt, Joachim

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Correction: Handling Permutation in Sequence Comparison: Genome-Wide Enhancer Prediction in Vertebrates by a Novel Non-Linear Alignment Scoring Principle von Dolle, Dirk, Mateo, Juan L, Eichenlaub, Michael P, Sinn, Rebecca, Reinhardt, Robert, Höckendorf, Burkhard, Inoue, Daigo, Centanin, Lazaro, Ettwiller, Laurence, Wittbrodt, Joachim

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CASCADE: A Custom-Made Archiving System for the Conservation of Ancient DNA Experimental Data von Dolle, Dirk, Fages, Antoine, Mata, Xavier, Schiavinato, Stephanie, Tonasso-Calviere, Laure, Chauvey, Lorelei, Wagner, Stefanie, Der Sarkissian, Clio, Fromentier, Aurore, Seguin-Orlando, Andaine, Orlando, Ludovic

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Large-scale analysis of the regulatory architecture of the mouse genome with a transposon-associated sensor von Ruf, Sandra, Symmons, Orsolya, Uslu, Veli Vural, Dolle, Dirk, Hot, Chloé, Ettwiller, Laurence, Spitz, François

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NPC-db, a Niemann-Pick type C disease gene variation database von Runz, Heiko, Dolle, Dirk, Schlitter, Anna Melissa, Zschocke, Johannes

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Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes von Dolle, Dirk D, Liu, Zhicheng, Cotten, Matthew, Simpson, Jared T, Iqbal, Zamin, Durbin, Richard, McCarthy, Shane A, Keane, Thomas M

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Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci von Lilue, Jingtao, Doran, Anthony G, Fiddes, Ian T, Abrudan, Monica, Armstrong, Joel, Bennett, Ruth, Chow, William, Collins, Joanna, Collins, Stephan, Czechanski, Anne, Danecek, Petr, Diekhans, Mark, Dolle, Dirk-Dominik, Dunn, Matt, Durbin, Richard, Earl, Dent, Ferguson-Smith, Anne, Flicek, Paul, Flint, Jonathan, Frankish, Adam, Fu, Beiyuan, Gerstein, Mark, Gilbert, James, Goodstadt, Leo, Harrow, Jennifer, Howe, Kerstin, Ibarra-Soria, Ximena, Kolmogorov, Mikhail, Lelliott, Chris J, Logan, Darren W, Loveland, Jane, Mathews, Clayton E, Mott, Richard, Muir, Paul, Nachtweide, Stefanie, Navarro, Fabio CP, Odom, Duncan T, Park, Naomi, Pelan, Sarah, Pham, Son K, Quail, Mike, Reinholdt, Laura, Romoth, Lars, Shirley, Lesley, Sisu, Cristina, Sjoberg-Herrera, Marcela, Stanke, Mario, Steward, Charles, Thomas, Mark, Threadgold, Glen, Thybert, David, Torrance, James, Wong, Kim, Wood, Jonathan, Yalcin, Binnaz, Yang, Fengtang, Adams, David J, Paten, Benedict, Keane, Thomas M

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Genomic and phenotypic characterisation of a wild Medaka population: Establishing an isogenic population genetic resource in fish von Spivakov, Mikhail, Auer, Thomas O, Peravali, Ravindra, Dunham, Ian, Dolle, Dirk, Fujiyama, Asao, Toyoda, Atsushi, Aizu, Tomoyuki, Minakuchi, Yohei, Loosli, Felix, Naruse, Kiyoshi, Birney, Ewan, Wittbrodt, Joachim

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Genomic and phenotypic characterisation of a wild Medaka population: Establishing an isogenic population genetic resource in fish von Spivakov, Mikhail, Auer, Thomas O, Peravali, Ravindra, Dunham, Ian, Dolle, Dirk, Fujiyama, Asao, Toyoda, Atsushi, Aizu, Tomoyuki, Minakuchi, Yohei, Loosli, Felix, Naruse, Kiyoshi, Birney, Ewan, Wittbrodt, Joachim

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Carbon Nanodots: Toward a Comprehensive Understanding of Their Photoluminescence von Strauss, Volker, Margraf, Johannes T., Dolle, Christian, Butz, Benjamin, Nacken, Thomas J., Walter, Johannes, Bauer, Walter, Peukert, Wolfgang, Spiecker, Erdmann, Clark, Timothy, Guldi, Dirk M.

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Detection of blood–brain barrier disruption in brains of patients with COVID-19, but no evidence of brain penetration by SARS-CoV-2 von Song, Hailong, Tomasevich, Alexandra, Acheampong, Kofi K., Schaff, Dylan L., Shaffer, Sydney M., Dolle, Jean-Pierre, Johnson, Victoria E., Mikytuck, Bailey, Lee, Edward B., Nolan, Amber, Keene, C. Dirk, Weiss, Susan R., Stewart, William, Smith, Douglas H.

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Synergy of Electrostatic and π–π Interactions in the Realization of Nanoscale Artificial Photosynthetic Model Systems von Anaya‐Plaza, Eduardo, Joseph, Jan, Bauroth, Stefan, Wagner, Maximilian, Dolle, Christian, Sekita, Michael, Gröhn, Franziska, Spiecker, Erdmann, Clark, Timothy, Escosura, Andrés, Guldi, Dirk M., Torres, Tomás

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Current paradigm of the 18-kDa translocator protein (TSPO) as a molecular target for PET imaging in neuroinflammation and neurodegenerative diseases von Ching, Alex Sik Chung, Kuhnast, Bertrand, Damont, Annelaure, Roeda, Dirk, Tavitian, Bertrand, Dollé, Frédéric

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