Transcriptional Regulation of Germinal Center B and Plasma Cell Fates by Dynamical Control of IRF4 von Ochiai, Kyoko, Maienschein-Cline, Mark, Simonetti, Giorgia, Chen, Jianjun, Rosenthal, Rebecca, Brink, Robert, Chong, Anita S., Klein, Ulf, Dinner, Aaron R., Singh, Harinder, Sciammas, Roger

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Spatiotemporal control of liquid crystal structure and dynamics through activity patterning von Zhang, Rui, Redford, Steven A., Ruijgrok, Paul V., Kumar, Nitin, Mozaffari, Ali, Zemsky, Sasha, Dinner, Aaron R., Vitelli, Vincenzo, Bryant, Zev, Gardel, Margaret L., de Pablo, Juan J.

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Effects of Diurnal Variation of Gut Microbes and High-Fat Feeding on Host Circadian Clock Function and Metabolism von Leone, Vanessa, Gibbons, Sean M., Martinez, Kristina, Hutchison, Alan L., Huang, Edmond Y., Cham, Candace M., Pierre, Joseph F., Heneghan, Aaron F., Nadimpalli, Anuradha, Hubert, Nathaniel, Zale, Elizabeth, Wang, Yunwei, Huang, Yong, Theriault, Betty, Dinner, Aaron R., Musch, Mark W., Kudsk, Kenneth A., Prendergast, Brian J., Gilbert, Jack A., Chang, Eugene B.

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Dynamics of activation in the voltage-sensing domain of Ciona intestinalis phosphatase Ci-VSP von Guo, Spencer C., Shen, Rong, Roux, Benoît, Dinner, Aaron R.

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Inexact iterative numerical linear algebra for neural network-based spectral estimation and rare-event prediction von Strahan, John, Guo, Spencer C., Lorpaiboon, Chatipat, Dinner, Aaron R., Weare, Jonathan

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Single-cell analysis defines the divergence between the innate lymphoid cell lineage and lymphoid tissue–inducer cell lineage von Ishizuka, Isabel E, Chea, Sylvestre, Gudjonson, Herman, Constantinides, Michael G, Dinner, Aaron R, Bendelac, Albert, Golub, Rachel

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Contractile units in disordered actomyosin bundles arise from F-actin buckling von Lenz, Martin, Thoresen, Todd, Gardel, Margaret L, Dinner, Aaron R

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PLZF expression maps the early stages of ILC1 lineage development von Constantinides, Michael G., Gudjonson, Herman, McDonald, Benjamin D., Ishizuka, Isabel E., Verhoef, Philip A., Dinner, Aaron R., Bendelac, Albert

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A Conserved Bicycle Model for Circadian Clock Control of Membrane Excitability von Flourakis, Matthieu, Kula-Eversole, Elzbieta, Hutchison, Alan L., Han, Tae Hee, Aranda, Kimberly, Moose, Devon L., White, Kevin P., Dinner, Aaron R., Lear, Bridget C., Ren, Dejian, Diekman, Casey O., Raman, Indira M., Allada, Ravi

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A self-reinforcing regulatory network triggered by limiting IL-7 activates pre-BCR signaling and differentiation von Ochiai, Kyoko, Maienschein-Cline, Mark, Mandal, Malay, Triggs, Joseph R, Bertolino, Eric, Sciammas, Roger, Dinner, Aaron R, Clark, Marcus R, Singh, Harinder

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Epigenetic repression of the Igk locus by STAT5-mediated recruitment of the histone methyltransferase Ezh2 von Mandal, Malay, Powers, Sarah E, Maienschein-Cline, Mark, Bartom, Elizabeth T, Hamel, Keith M, Kee, Barbara L, Dinner, Aaron R, Clark, Marcus R

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Transient intracellular acidification regulates the core transcriptional heat shock response von Triandafillou, Catherine G., Katanski, Christopher D., Dinner, Aaron R., Drummond, D. Allan

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Molecular dynamics simulations of nucleotide release from the circadian clock protein KaiC reveal atomic-resolution functional insights von Hong, Lu, Vani, Bodhi P., Thiede, Erik H., Rust, Michael J., Dinner, Aaron R.

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Automatic Method for Identifying Reaction Coordinates in Complex Systems von Ma, Ao, Dinner, Aaron R.

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Multilineage Transcriptional Priming and Determination of Alternate Hematopoietic Cell Fates von Laslo, Peter, Spooner, Chauncey J., Warmflash, Aryeh, Lancki, David W., Lee, Hyun-Jun, Sciammas, Roger, Gantner, Benjamin N., Dinner, Aaron R., Singh, Harinder

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Universality in stochastic exponential growth von Iyer-Biswas, Srividya, Crooks, Gavin E, Scherer, Norbert F, Dinner, Aaron R

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Distribution of directional change as a signature of complex dynamics von Burov, Stanislav, Tabei, S. M. Ali, Huynh, Toan, Murrell, Michael P., Philipson, Louis H., Rice, Stuart A., Gardel, Margaret L., Scherer, Norbert F., Dinner, Aaron R.

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CHARMM: The biomolecular simulation program von Brooks, B.R, Brooks, C.L. III, Mackerell, A.D. Jr, Nilsson, L, Petrella, R.J, Roux, B, Won, Y, Archontis, G, Bartels, C, Boresch, S, Caflisch, A, Caves, L, Cui, Q, Dinner, A.R, Feig, M, Fischer, S, Gao, J, Hodoscek, M, Im, W, Kuczera, K, Lazaridis, T, Ma, J, Ovchinnikov, V, Paci, E, Pastor, R.W, Post, C.B, Pu, J.Z, Schaefer, M, Tidor, B, Venable, R.M, Woodcock, H.L, Wu, X, Yang, W, York, D.M, Karplus, M

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Structural basis for oligomerization and glycosaminoglycan binding of CCL5 and CCL3 von Liang, Wenguang G., Triandafillou, Catherine G., Huang, Teng-Yi, Zulueta, Medel Manuel L., Banerjee, Shiladitya, Dinner, Aaron R., Hung, Shang-Cheng, Tang, Wei-Jen

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Polymerization of MIP-1 chemokine (CCL3 and CCL4) and clearance of MIP-1 by insulin-degrading enzyme von Ren, Min, Guo, Qing, Guo, Liang, Lenz, Martin, Qian, Feng, Koenen, Rory R, Xu, Hua, Schilling, Alexander B, Weber, Christian, Ye, Richard D, Dinner, Aaron R, Tang, Wei-Jen

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