The SARS-CoV-2 nucleocapsid phosphoprotein forms mutually exclusive condensates with RNA and the membrane-associated M protein von Lu, Shan, Ye, Qiaozhen, Singh, Digvijay, Cao, Yong, Diedrich, Jolene K., Yates, John R., Villa, Elizabeth, Cleveland, Don W., Corbett, Kevin D.

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Primate-Specific ORF0 Contributes to Retrotransposon-Mediated Diversity von Denli, Ahmet M., Narvaiza, Iñigo, Kerman, Bilal E., Pena, Monique, Benner, Christopher, Marchetto, Maria C.N., Diedrich, Jolene K., Aslanian, Aaron, Ma, Jiao, Moresco, James J., Moore, Lynne, Hunter, Tony, Saghatelian, Alan, Gage, Fred H.

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Regulation of the ER stress response by a mitochondrial microprotein von Chu, Qian, Martinez, Thomas F., Novak, Sammy Weiser, Donaldson, Cynthia J., Tan, Dan, Vaughan, Joan M., Chang, Tina, Diedrich, Jolene K., Andrade, Leo, Kim, Andrew, Zhang, Tong, Manor, Uri, Saghatelian, Alan

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Heat-shock chaperone HSPB1 regulates cytoplasmic TDP-43 phase separation and liquid-to-gel transition von Lu, Shan, Hu, Jiaojiao, Arogundade, Olubankole Aladesuyi, Goginashvili, Alexander, Vazquez-Sanchez, Sonia, Diedrich, Jolene K., Gu, Jinge, Blum, Jacob, Oung, Spencer, Ye, Qiaozhen, Yu, Haiyang, Ravits, John, Liu, Cong, Yates, John R., Cleveland, Don W.

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Intracellular amyloid toxicity induces oxytosis/ferroptosis regulated cell death von Huang, Ling, McClatchy, Daniel B., Maher, Pamela, Liang, Zhibin, Diedrich, Jolene K., Soriano-Castell, David, Goldberg, Joshua, Shokhirev, Maxim, Yates, John R., Schubert, David, Currais, Antonio

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Improved Identification and Analysis of Small Open Reading Frame Encoded Polypeptides von Ma, Jiao, Diedrich, Jolene K, Jungreis, Irwin, Donaldson, Cynthia, Vaughan, Joan, Kellis, Manolis, Yates, John R, Saghatelian, Alan

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A two-step mechanism for TRF2-mediated chromosome-end protection von Okamoto, Keiji, Bartocci, Cristina, Ouzounov, Iliana, Diedrich, Jolene K., Yates III, John R., Denchi, Eros Lazzerini

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Global site-specific N-glycosylation analysis of HIV envelope glycoprotein von Cao, Liwei, Diedrich, Jolene K., Kulp, Daniel W., Pauthner, Matthias, He, Lin, Park, Sung-Kyu Robin, Sok, Devin, Su, Ching Yao, Delahunty, Claire M., Menis, Sergey, Andrabi, Raiees, Guenaga, Javier, Georgeson, Erik, Kubitz, Michael, Adachi, Yumiko, Burton, Dennis R., Schief, William R., Yates III, John R., Paulson, James C.

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Differential processing of HIV envelope glycans on the virus and soluble recombinant trimer von Cao, Liwei, Pauthner, Matthias, Andrabi, Raiees, Rantalainen, Kimmo, Berndsen, Zachary, Diedrich, Jolene K., Menis, Sergey, Sok, Devin, Bastidas, Raiza, Park, Sung-Kyu Robin, Delahunty, Claire M., He, Lin, Guenaga, Javier, Wyatt, Richard T., Schief, William R., Ward, Andrew B., Yates, John R., Burton, Dennis R., Paulson, James C.

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Visualization of the HIV-1 Env glycan shield across scales von Berndsen, Zachary T., Chakraborty, Srirupa, Wang, Xiaoning, Cottrell, Christopher A., Torres, Jonathan L., Diedrich, Jolene K., López, Cesar A., Yates, John R., van Gils, Marit J., Paulson, James C., Gnanakaran, Sandrasegaram, Ward, Andrew B.

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Global site-specific analysis of glycoprotein N-glycan processing von Cao, Liwei, Diedrich, Jolene K, Ma, Yuanhui, Wang, Nianshuang, Pauthner, Matthias, Park, Sung-Kyu Robin, Delahunty, Claire M, McLellan, Jason S, Burton, Dennis R, Yates, John R, Paulson, James C

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S-Nitrosylation of PINK1 Attenuates PINK1/Parkin-Dependent Mitophagy in hiPSC-Based Parkinson’s Disease Models von Oh, Chang-Ki, Sultan, Abdullah, Platzer, Joseph, Dolatabadi, Nima, Soldner, Frank, McClatchy, Daniel B., Diedrich, Jolene K., Yates, John R., Ambasudhan, Rajesh, Nakamura, Tomohiro, Jaenisch, Rudolf, Lipton, Stuart A.

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Using in vivo intact structure for system-wide quantitative analysis of changes in proteins von Son, Ahrum, Kim, Hyunsoo, Diedrich, Jolene K., Bamberger, Casimir, McClatchy, Daniel B., Lipton, Stuart A., Yates, John R.

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Site-Specific O-Glycosylation Analysis of SARS-CoV-2 Spike Protein Produced in Insect and Human Cells von Bagdonaite, Ieva, Thompson, Andrew J, Wang, Xiaoning, Søgaard, Max, Fougeroux, Cyrielle, Frank, Martin, Diedrich, Jolene K, Yates, 3rd, John R, Salanti, Ali, Vakhrushev, Sergey Y, Paulson, James C, Wandall, Hans H

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SHMT2 and the BRCC36/BRISC deubiquitinase regulate HIV-1 Tat K63-ubiquitylation and destruction by autophagy von Xu, Muyu, Moresco, James J, Chang, Max, Mukim, Amey, Smith, Davey, Diedrich, Jolene K, Yates, 3rd, John R, Jones, Katherine A

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Time-resolved proteomic profile of Amblyomma americanum tick saliva during feeding von Kim, Tae Kwon, Tirloni, Lucas, Pinto, Antônio F M, Diedrich, Jolene K, Moresco, James J, Yates, 3rd, John R, da Silva Vaz, Jr, Itabajara, Mulenga, Albert

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Identification of Microprotein–Protein Interactions via APEX Tagging von Chu, Qian, Rathore, Annie, Diedrich, Jolene K, Donaldson, Cynthia J, Yates, John R, Saghatelian, Alan

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Human Influenza Virus Hemagglutinins Contain Conserved Oligomannose N-Linked Glycans Allowing Potent Neutralization by Lectins von Thompson, Andrew J., Cao, Liwei, Ma, Yuanhui, Wang, Xiaoning, Diedrich, Jolene K., Kikuchi, Chika, Willis, Shelby, Worth, Charli, McBride, Ryan, Yates, John R., Paulson, James C.

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Double mimicry evades tRNA synthetase editing by toxic vegetable-sourced non-proteinogenic amino acid von Song, Youngzee, Zhou, Huihao, Vo, My-Nuong, Shi, Yi, Nawaz, Mir Hussain, Vargas-Rodriguez, Oscar, Diedrich, Jolene K., Yates, John R., Kishi, Shuji, Musier-Forsyth, Karin, Schimmel, Paul

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Borrelia burgdorferi infection modifies protein content in saliva of Ixodes scapularis nymphs von Kim, Tae Kwon, Tirloni, Lucas, Bencosme-Cuevas, Emily, Kim, Tae Heung, Diedrich, Jolene K, Yates, 3rd, John R, Mulenga, Albert

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