NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes von DeSantis, T. Z., Hugenholtz, P., Keller, K., Brodie, E. L., Larsen, N., Piceno, Y. M., Phan, R., Andersen, G. L.

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Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB von DESANTIS, T. Z, HUGENHOLTZ, P, LARSEN, N, ROJAS, M, BRODIE, E. L, KELLER, K, HUBER, T, DALEVI, D, HU, P, ANDERSEN, G. L

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Colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease von Ryan, F. J., Ahern, A. M., Fitzgerald, R. S., Laserna-Mendieta, E. J., Power, E. M., Clooney, A. G., O’Donoghue, K. W., McMurdie, P. J., Iwai, S., Crits-Christoph, A., Sheehan, D., Moran, C., Flemer, B., Zomer, A. L., Fanning, A., O’Callaghan, J., Walton, J., Temko, A., Stack, W., Jackson, L., Joyce, S. A., Melgar, S., DeSantis, T. Z., Bell, J. T., Shanahan, F., Claesson, M. J.

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Loss of Bacterial Diversity during Antibiotic Treatment of Intubated Patients Colonized with Pseudomonas aeruginosa von Flanagan, J.L, Brodie, E.L, Weng, L, Lynch, S.V, Garcia, O, Brown, R, Hugenholtz, P, DeSantis, T.Z, Andersen, G.L, Wiener-Kronish, J.P, Bristow, J

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Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers von Liu, Zongzhi, DeSantis, Todd Z, Andersen, Gary L, Knight, Rob

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Bacterial communities in commercial aircraft high-efficiency particulate air (HEPA) filters assessed by PhyloChip analysis von Korves, T. M., Piceno, Y. M., Tom, L. M., DeSantis, T. Z., Jones, B. W., Andersen, G. L., Hwang, G. M.

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Comprehensive aligned sequence construction for automated design of effective probes (CASCADE-P) using 16S rDNA von DESANTIS, T. Z, DUBOSARSKIY, I, MURRAY, S. R, ANDERSEN, G. L

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Sequence-specific identification of 18 pathogenic microorganisms using microarray technology von Wilson, W.J., Strout, C.L., DeSantis, T.Z., Stilwell, J.L., Carrano, A.V., Andersen, G.L.

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Development of a high‐volume aerosol collection system for the identification of air‐borne micro‐organisms von Radosevich, J.L., Wilson, W.J., Shinn, J.H., DeSantis, T.Z., Andersen, G.L.

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High-Density Microarray of Small-Subunit Ribosomal DNA Probes von WILSON, Kenneth H, WILSON, Wendy J, RADOSEVICH, Jennifer L, DESANTIS, Todd Z, VISWANATHAN, Vijay S, KUCZMARSKI, Thomas A, ANDERSEN, Gary L

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PyNAST: a flexible tool for aligning sequences to a template alignment von Caporaso, J. Gregory, Bittinger, Kyle, Bushman, Frederic D., DeSantis, Todd Z., Andersen, Gary L., Knight, Rob

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PhyloChip microarray analysis reveals altered gastrointestinal microbial communities in a rat model of colonic hypersensitivity von Nelson, T. A., Holmes, S., Alekseyenko, A. V., Shenoy, M., Desantis, T., Wu, C. H., Andersen, G. L., Winston, J., Sonnenburg, J., Pasricha, P. J., Spormann, A.

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Rapid quantification and taxonomic classification of environmental DNA from both prokaryotic and eukaryotic origins using a microarray von DeSantis, Todd Z., Stone, Carol E., Murray, Sonya R., Moberg, Jordan P., Andersen, Gary L.

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DOP54 Identification and development of a 1st in class naturally-derived protein that drives mucosal healing and is orally delivered by an engineered cellular therapy targeting the... von Shilova, I, La Chat, C, Nigatu, E, Messner, E, Desnoyer, J, Willcoxon, M, Banas, S, Ravichandar, D, Narayan, N, DeSantis, T, Dabbagh, K, Yamamoto, L

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Colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease von Ryan, F. J, Ahern, A. M, Fitzgerald, R. S, Laserna-Mendieta, E. J, Power, E. M, Clooney, A. G, O’Donoghue, K. W, McMurdie, P. J, Iwai, S, Crits-Christoph, A, Sheehan, D, Moran, C, Flemer, B, Zomer, A. L, Fanning, A, O’Callaghan, J, Walton, J, Temko, A, Stack, W, Jackson, L, Joyce, S. A, Melgar, S, DeSantis, T. Z, Bell, J. T, Shanahan, F, Claesson, M. J

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Carbohydrate Moieties and Cytoenzymatic Characterization of Hemocytes in Whiteleg Shrimp Litopenaeus vannamei von Ascencio, Felipe, Rodríguez-Jaramillo, Carmen, Velázquez, Edwin, Estrada, Norma

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Gut Bacterial Populations in Multiple Sclerosis and in Health (P05.106) von Mowry, E., Waubant, E., Chehoud, C., DeSantis, T., Kuczynski, J., Warrington, J.

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Comprehensive aligned sequence constructionfor automated design of effective probes (CASCADE-P) using 16S rDNA von DeSantis, T. Z., Dubosarskiy, I., Murray, S. R., Andersen, G. L.

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Use of polypropylene fibers coated with nano-silica particles into a cementitious mortar von Coppola, B., Di Maio, L., Scarfato, P., Incarnato, L.

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PCR Amplification-Independent Methods for Detection of Microbial Communities by the High-Density Microarray PhyloChip von DEANGELIS, Kristen M, WU, Cindy H, TOM, Lauren M, ANDERSEN, Gary L, BELLER, Harry R, BRODIE, Eoin L, CHAKRABORTY, Romy, DESANTIS, Todd Z, FORTNEY, Julian L, HAZEN, Terry C, OSMAN, Shariff R, SINGER, Mary E

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