Fundamental trade-offs between information flow in single cells and cellular populations von Suderman, Ryan, Bachman, John A., Smith, Adam, Sorger, Peter K., Deeds, Eric J.

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Crosstalk and the evolution of specificity in two-component signaling von Rowland, Michael A., Deeds, Eric J.

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Machines vs. ensembles: effective MAPK signaling through heterogeneous sets of protein complexes von Suderman, Ryan, Deeds, Eric J

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Novel metrics reveal new structure and unappreciated heterogeneity in Caenorhabditis elegans development von Natesan, Gunalan, Hamilton, Timothy, Deeds, Eric J, Shah, Pavak K

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Sizing up allometric scaling theory von Savage, Van M, Deeds, Eric J, Fontana, Walter

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Crosstalk and Competition in Signaling Networks von Rowland, Michael A., Fontana, Walter, Deeds, Eric J.

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Crosstalk and the evolvability of intracellular communication von Rowland, Michael A., Greenbaum, Joseph M., Deeds, Eric J.

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Crosstalk and ultrasensitivity in protein degradation pathways von Mallela, Abhishek, Nariya, Maulik K, Deeds, Eric J

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Machine learning classification can reduce false positives in structure-based virtual screening von Adeshina, Yusuf O., Deeds, Eric J., Karanicolas, John

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Combinatorial complexity and compositional drift in protein interaction networks von Deeds, Eric J, Krivine, Jean, Feret, Jérôme, Danos, Vincent, Fontana, Walter

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Phosphatase Specificity and Pathway Insulation in Signaling Networks von Rowland, Michael A., Harrison, Brian, Deeds, Eric J.

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Optimizing ring assembly reveals the strength of weak interactions von Deeds, Eric J, Bachman, John A, Fontana, Walter

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Curvature in metabolic scaling von Fontana, Walter, Kolokotrones, Tom, Van Savage, Deeds, Eric J

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Robust protein-protein interactions in crowded cellular environments von Deeds, Eric J, Ashenberg, Orr, Gerardin, Jaline, Shakhnovich, Eugene I

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Mathematical Model for Length Control by the Timing of Substrate Switching in the Type III Secretion System von Nariya, Maulik K, Israeli, Johnny, Shi, Jack J, Deeds, Eric J

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Understanding the separation of timescales in bacterial proteasome core particle assembly von Itagi, Pushpa, Kante, Anupama, Lagunes, Leonila, Deeds, Eric J.

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Modeling reveals the strength of weak interactions in stacked-ring assembly von Lagunes, Leonila, Briggs, Koan, Martin-Holder, Paige, Xu, Zaikun, Maurer, Dustin, Ghabra, Karim, Deeds, Eric J.

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Binomial models uncover biological variation during feature selection of droplet-based single-cell RNA sequencing von Sparta, Breanne, Hamilton, Timothy, Natesan, Gunalan, Aragones, Samuel D, Deeds, Eric J

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A Simple Physical Model for Scaling in Protein-Protein Interaction Networks von Deeds, Eric J., Ashenberg, Orr, Shakhnovich, Eugene I.

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Docking-based long timescale simulation of cell-size protein systems at atomic resolution von Vakser, Ilya A., Grudinin, Sergei, Jenkins, Nathan W., Kundrotas, Petras J., Deeds, Eric J.

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