Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications von Valdés, Jorge, Pedroso, Inti, Quatrini, Raquel, Dodson, Robert J, Tettelin, Herve, Blake, 2nd, Robert, Eisen, Jonathan A, Holmes, David S

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Extending the models for iron and sulfur oxidation in the extreme acidophile Acidithiobacillus ferrooxidans von Quatrini, Raquel, Appia-Ayme, Corinne, Denis, Yann, Jedlicki, Eugenia, Holmes, David S, Bonnefoy, Violaine

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Eurypsychrophilic acidophiles: From (meta)genomes to low-temperature biotechnologies von Dopson, Mark, González-Rosales, Carolina, Holmes, David S, Mykytczuk, Nadia

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Genome-guided prediction of acid resistance mechanisms in acidophilic methanotrophs of phylogenetically deep-rooted Verrucomicrobia isolated from geothermal environments von Neira, Gonzalo, Vergara, Eva, Holmes, David S.

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Anaerobic Sulfur Metabolism Coupled to Dissimilatory Iron Reduction in the Extremophile Acidithiobacillus ferrooxidans von OSORIO, Hector, MANGOLD, Stefanie, DENIS, Yann, NANCUCHEO, Ivan, ESPARZA, Mario, JOHNSON, D. Barrie, BONNEFOY, Violaine, DOPSON, Mark, HOLMES, David S

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A Large-Scale Genome-Based Survey of Acidophilic Bacteria Suggests That Genome Streamlining Is an Adaption for Life at Low pH von Cortez, Diego, Neira, Gonzalo, González, Carolina, Vergara, Eva, Holmes, David S

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Aerobic Lineage of the Oxidative Stress Response Protein Rubrerythrin Emerged in an Ancient Microaerobic, (Hyper)Thermophilic Environment von Cardenas, Juan P, Quatrini, Raquel, Holmes, David S

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Integrative Genomics Sheds Light on Evolutionary Forces Shaping the Acidithiobacillia Class Acidophilic Lifestyle von González-Rosales, Carolina, Vergara, Eva, Dopson, Mark, Valdés, Jorge H, Holmes, David S

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Effect of CO2 Concentration on Uptake and Assimilation of Inorganic Carbon in the Extreme Acidophile Acidithiobacillus ferrooxidans von Esparza, Mario, Jedlicki, Eugenia, González, Carolina, Dopson, Mark, Holmes, David S.

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Draft Genome of the Psychrotolerant Acidophile Acidithiobacillus ferrivorans SS3 von LILJEQVIST, Maria, VALES, Jorge, HOLMES, David S, DOPSON, Mark

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Draft Genome Sequence of the Extremely Acidophilic Biomining Bacterium Acidithiobacillus thiooxidans ATCC 19377 Provides Insights into the Evolution of the Acidithiobacillus Genus von VALDES, Jorge, OSSANDON, Francisco, QUATRINI, Raquel, DOPSON, Mark, HOLMES, David S

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Genome-based classification of two halotolerant extreme acidophiles, Acidihalobacter prosperus V6 (=DSM 14174 =JCM 32253) and 'Acidihalobacter ferrooxidans' V8 (=DSM 14175 =JCM 322... von Khaleque, Himel N, González, Carolina, Kaksonen, Anna H, Boxall, Naomi J, Holmes, David S, Watkin, Elizabeth L J

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Genome Analysis of the Biotechnologically Relevant Acidophilic Iron Oxidising Strain JA12 Indicates Phylogenetic and Metabolic Diversity within the Novel Genus "Ferrovum" von Ullrich, Sophie R, Poehlein, Anja, Tischler, Judith S, González, Carolina, Ossandon, Francisco J, Daniel, Rolf, Holmes, David S, Schlömann, Michael, Mühling, Martin

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Sulfur metabolism in the extreme acidophile acidithiobacillus caldus von Mangold, Stefanie, Valdés, Jorge, Holmes, David S, Dopson, Mark

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Uncovering the Mechanisms of Halotolerance in the Extremely Acidophilic Members of the Acidihalobacter Genus Through Comparative Genome Analysis von Khaleque, Himel N, González, Carolina, Shafique, Raihan, Kaksonen, Anna H, Holmes, David S, Watkin, Elizabeth L J

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Graphlet Based Metrics for the Comparison of Gene Regulatory Networks von Martin, Alberto J M, Dominguez, Calixto, Contreras-Riquelme, Sebastián, Holmes, David S, Perez-Acle, Tomas

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A Large-Scale Multiple Genome Comparison of Acidophilic Archaea (pH ≤ 5.0) Extends Our Understanding of Oxidative Stress Responses in Polyextreme Environments von Neira, Gonzalo, Vergara, Eva, Cortez, Diego, Holmes, David S

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Metal resistance or tolerance? Acidophiles confront high metal loads via both abiotic and biotic mechanisms von Dopson, Mark, Ossandon, Francisco J, Lövgren, Lars, Holmes, David S

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Architecture and gene repertoire of the flexible genome of the extreme acidophile Acidithiobacillus caldus von Acuña, Lillian G, Cárdenas, Juan Pablo, Covarrubias, Paulo C, Haristoy, Juan José, Flores, Rodrigo, Nuñez, Harold, Riadi, Gonzalo, Shmaryahu, Amir, Valdés, Jorge, Dopson, Mark, Rawlings, Douglas E, Banfield, Jillian F, Holmes, David S, Quatrini, Raquel

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Metal resistance in acidophilic microorganisms and its significance for biotechnologies von Dopson, Mark, Holmes, David S

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