Amalgamated cross-species transcriptomes reveal organ-specific propensity in gene expression evolution von Fukushima, Kenji, Pollock, David D.

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Repetitive elements may comprise over two-thirds of the human genome von de Koning, A P Jason, Gu, Wanjun, Castoe, Todd A, Batzer, Mark A, Pollock, David D

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Amino acid coevolution induces an evolutionary Stokes shift von Pollock, David D, Thiltgen, Grant, Goldstein, Richard A

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Author Correction: Amalgamated cross-species transcriptomes reveal organ-specific propensity in gene expression evolution von Fukushima, Kenji, Pollock, David D.

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Rapid microsatellite identification from Illumina paired-end genomic sequencing in two birds and a snake von Castoe, Todd A, Poole, Alexander W, de Koning, A P Jason, Jones, Kenneth L, Tomback, Diana F, Oyler-McCance, Sara J, Fike, Jennifer A, Lance, Stacey L, Streicher, Jeffrey W, Smith, Eric N, Pollock, David D

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Gene-specific RNA polymerase II phosphorylation and the CTD code von Erickson, Benjamin, Pollock, David D, Seward, David, Megee, Paul C, Bentley, David L, Graber, Joel H, Luo, Weifei, Kim, Hyunmin

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Evidence for an ancient adaptive episode of convergent molecular evolution von Castoe, Todd A, de Koning, A.P. Jason, Kim, Hyun-Min, Gu, Wanjun, Noonan, Brice P, Naylor, Gavin, Jiang, Zhi J, Parkinson, Christopher L, Pollock, David D

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Strong evidence for protein epistasis, weak evidence against it von Pollock, David D, Goldstein, Richard A

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Adaptive evolution and functional redesign of core metabolic proteins in snakes von Castoe, Todd A, Jiang, Zhi J, Gu, Wanjun, Wang, Zhengyuan O, Pollock, David D

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Phylodynamics of a regional SARS-CoV-2 rapid spreading event in Colorado in late 2020 von Wade, Kristen J, Tisa, Samantha, Barrington, Chloe, Henriksen, Jesslyn C, Crooks, Kristy R, Gignoux, Christopher R, Almand, Austin T, Steel, J Jordan, Sitko, John C, Rohrer, Joseph W, Wickert, Douglas P, Almand, Erin A, Pollock, David D, Rissland, Olivia S

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Rapid identification of thousands of copperhead snake (Agkistrodon contortrix) microsatellite loci from modest amounts of 454 shotgun genome sequence von CASTOE, TODD A, POOLE, ALEXANDER W, GU, WANJUN, JASONdeKONING, A.P, DAZA, JUAN M, SMITH, ERIC N, POLLOCK, DAVID D

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Population genomic analyses of schistosome parasites highlight critical challenges facing endgame elimination efforts von Shortt, Jonathan A., Timm, Laura E., Hales, Nicole R., Nikolakis, Zachary L., Schield, Drew R., Perry, Blair W., Liu, Yang, Zhong, Bo, Castoe, Todd A., Carlton, Elizabeth J., Pollock, David D.

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Finding and extending ancient simple sequence repeat-derived regions in the human genome von Shortt, Jonathan A, Ruggiero, Robert P, Cox, Corey, Wacholder, Aaron C, Pollock, David D

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LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders von Sun, Cheng, Shepard, Donald B, Chong, Rebecca A, López Arriaza, José, Hall, Kathryn, Castoe, Todd A, Feschotte, Cédric, Pollock, David D, Mueller, Rachel Lockridge

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Increased Taxon Sampling Is Advantageous for Phylogenetic Inference von Pollock, David D., Zwickl, Derrick J., McGuire, Jimmy A., Hillis, David M., Crandall, Keith

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Assessing the accuracy of ancestral protein reconstruction methods von Williams, Paul D, Pollock, David D, Blackburne, Benjamin P, Goldstein, Richard A

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Patterns of relatedness and genetic diversity inferred from whole genome sequencing of archival blood fluke miracidia (Schistosoma japonicum) von Nikolakis, Zachary L, Hales, Nicole R, Perry, Blair W, Schield, Drew R, Timm, Laura E, Liu, Yang, Zhong, Bo, Kechris, Katerina J, Carlton, Elizabeth J, Pollock, David D, Castoe, Todd A

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Integrating genomic and epidemiologic data to accelerate progress toward schistosomiasis elimination von Lund, Andrea J, Wade, Kristen J, Nikolakis, Zachary L, Ivey, Kathleen N, Perry, Blair W, Pike, Hamish N C, Paull, Sara H, Liu, Yang, Castoe, Todd A, Pollock, David D, Carlton, Elizabeth J

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Society for Molecular Biology and Evolution, Council and Business Meetings, 2019, Manchester, United Kingdom von Pollock, David D

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Comparison of Normalization Methods for Construction of Large, Multiplex Amplicon Pools for Next-Generation Sequencing von Harris, J. Kirk, Sahl, Jason W, Castoe, Todd A, Wagner, Brandie D, Pollock, David D, Spear, John R

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