The phenotypic legacy of admixture between modern humans and Neandertals von Simonti, Corinne N., Vernot, Benjamin, Bastarache, Lisa, Bottinger, Erwin, Carrell, David S., Chisholm, Rex L., Crosslin, David R., Hebbring, Scott J., Jarvik, Gail P., Kullo, Iftikhar J., Li, Rongling, Pathak, Jyotishman, Ritchie, Marylyn D., Roden, Dan M., Verma, Shefali S., Tromp, Gerard, Prato, Jeffrey D., Bush, William S., Akey, Joshua M., Denny, Joshua C., Capra, John A.

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PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability von Kirby, Jacqueline C, Speltz, Peter, Rasmussen, Luke V, Basford, Melissa, Gottesman, Omri, Peissig, Peggy L, Pacheco, Jennifer A, Tromp, Gerard, Pathak, Jyotishman, Carrell, David S, Ellis, Stephen B, Lingren, Todd, Thompson, Will K, Savova, Guergana, Haines, Jonathan, Roden, Dan M, Harris, Paul A, Denny, Joshua C

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Public Attitudes toward Consent and Data Sharing in Biobank Research: A Large Multi-site Experimental Survey in the US von Sanderson, Saskia C., Brothers, Kyle B., Mercaldo, Nathaniel D., Clayton, Ellen Wright, Antommaria, Armand H. Matheny, Aufox, Sharon A., Brilliant, Murray H., Campos, Diego, Carrell, David S., Connolly, John, Conway, Pat, Fullerton, Stephanie M., Garrison, Nanibaa’ A., Horowitz, Carol R., Jarvik, Gail P., Kaufman, David, Kitchner, Terrie E., Li, Rongling, Ludman, Evette J., McCarty, Catherine A., McCormick, Jennifer B., McManus, Valerie D., Myers, Melanie F., Scrol, Aaron, Williams, Janet L., Shrubsole, Martha J., Schildcrout, Jonathan S., Smith, Maureen E., Holm, Ingrid A.

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GWAS and enrichment analyses of non-alcoholic fatty liver disease identify new trait-associated genes and pathways across eMERGE Network von Namjou, Bahram, Lingren, Todd, Huang, Yongbo, Parameswaran, Sreeja, Cobb, Beth L, Stanaway, Ian B, Connolly, John J, Mentch, Frank D, Benoit, Barbara, Niu, Xinnan, Wei, Wei-Qi, Carroll, Robert J, Pacheco, Jennifer A, Harley, Isaac T W, Divanovic, Senad, Carrell, David S, Larson, Eric B, Carey, David J, Verma, Shefali, Ritchie, Marylyn D, Gharavi, Ali G, Murphy, Shawn, Williams, Marc S, Crosslin, David R, Jarvik, Gail P, Kullo, Iftikhar J, Hakonarson, Hakon, Li, Rongling, Xanthakos, Stavra A, Harley, John B

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Negation's not solved: generalizability versus optimizability in clinical natural language processing von Wu, Stephen, Miller, Timothy, Masanz, James, Coarr, Matt, Halgrim, Scott, Carrell, David, Clark, Cheryl

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Frequency of genomic secondary findings among 21,915 eMERGE network participants von Gordon, Adam S, Zouk Hana, Venner, Eric, Eng, Christine M, Funke, Birgit H, Amendola, Laura M, Carrell, David S, Chisholm, Rex L, Chung, Wendy K, Denny, Joshua C, Fedotov, Alexander, Hakonarson Hakon, Kullo, Iftikhar J, Larson, Eric B, Leduc, Magalie S, Leppig, Kathleen A, Lennon, Niall J, Linder, Jodell E, Muzny, Donna M, Prows, Cynthia A, Rasmussen-Torvik, Laura J, Rasouly Hila Milo, Roden, Dan M, Rosenthal, Elisabeth A, Smith, Maureen E, Stanaway, Ian B, Van Driest Sara L, Walker, Kimberly, Wiesner, Georgia L, Williams, Marc S, Witkowski Leora, Crosslin David R, Gibbs, Richard A, Rehm, Heidi L, Jarvik, Gail P

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Multi-ancestry genome- and phenome-wide association studies of diverticular disease in electronic health records with natural language processing enriched phenotyping algorithm von Joo, Yoonjung Yoonie, Pacheco, Jennifer A, Thompson, William K, Rasmussen-Torvik, Laura J, Rasmussen, Luke V, Lin, Frederick T J, Andrade, Mariza de, Borthwick, Kenneth M, Bottinger, Erwin, Cagan, Andrew, Carrell, David S, Denny, Joshua C, Ellis, Stephen B, Gottesman, Omri, Linneman, James G, Pathak, Jyotishman, Peissig, Peggy L, Shang, Ning, Tromp, Gerard, Veerappan, Annapoorani, Smith, Maureen E, Chisholm, Rex L, Gawron, Andrew J, Hayes, M Geoffrey, Kho, Abel N

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Coding variants in TREM2 increase risk for Alzheimer's disease von Jin, Sheng Chih, Benitez, Bruno A, Karch, Celeste M, Cooper, Breanna, Skorupa, Tara, Carrell, David, Norton, Joanne B, Hsu, Simon, Harari, Oscar, Cai, Yefei, Bertelsen, Sarah, Goate, Alison M, Cruchaga, Carlos

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Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data von Denny, Joshua C, Bastarache, Lisa, Ritchie, Marylyn D, Carroll, Robert J, Zink, Raquel, Mosley, Jonathan D, Field, Julie R, Pulley, Jill M, Ramirez, Andrea H, Bowton, Erica, Basford, Melissa A, Carrell, David S, Peissig, Peggy L, Kho, Abel N, Pacheco, Jennifer A, Rasmussen, Luke V, Crosslin, David R, Crane, Paul K, Pathak, Jyotishman, Bielinski, Suzette J, Pendergrass, Sarah A, Xu, Hua, Hindorff, Lucia A, Li, Rongling, Manolio, Teri A, Chute, Christopher G, Chisholm, Rex L, Larson, Eric B, Jarvik, Gail P, Brilliant, Murray H, McCarty, Catherine A, Kullo, Iftikhar J, Haines, Jonathan L, Crawford, Dana C, Masys, Daniel R, Roden, Dan M

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Identification of Four Novel Loci in Asthma in European American and African American Populations von Almoguera, Berta, Vazquez, Lyam, Mentch, Frank, Connolly, John, Pacheco, Jennifer A, Sundaresan, Agnes S, Peissig, Peggy L, Linneman, James G, McCarty, Catherine A, Crosslin, David, Carrell, David S, Lingren, Todd, Namjou-Khales, Bahram, Harley, John B, Larson, Eric, Jarvik, Gail P, Brilliant, Murray, Williams, Marc S, Kullo, Iftikhar J, Hysinger, Erik B, Sleiman, Patrick M A, Hakonarson, Hakon

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Finding uncoded anaphylaxis in electronic health records to estimate the sensitivity of International Classification of Diseases, Tenth Revision, Clinical Modification codes von Hazlehurst, Brian, Carrell, David S, Bann, Maralyssa A, Nelson, Jennifer, Gruber, Susan, Slaughter, Matthew, Cronkite, David J, Ball, Robert, Floyd, James S

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Rare coding variants in the phospholipase D3 gene confer risk for Alzheimer’s disease von Cruchaga, Carlos, Karch, Celeste M., Jin, Sheng Chih, Benitez, Bruno A., Cai, Yefei, Guerreiro, Rita, Harari, Oscar, Norton, Joanne, Budde, John, Bertelsen, Sarah, Jeng, Amanda T., Cooper, Breanna, Skorupa, Tara, Carrell, David, Levitch, Denise, Hsu, Simon, Choi, Jiyoon, Ryten, Mina, Sassi, Celeste, Bras, Jose, Gibbs, J. Raphael, Hernandez, Dena G., Lupton, Michelle K., Powell, John, Forabosco, Paola, Ridge, Perry G., Corcoran, Christopher D., Tschanz, JoAnn T., Norton, Maria C., Munger, Ronald G., Schmutz, Cameron, Leary, Maegan, Demirci, F. Yesim, Bamne, Mikhil N., Wang, Xingbin, Lopez, Oscar L., Ganguli, Mary, Medway, Christopher, Turton, James, Lord, Jenny, Braae, Anne, Barber, Imelda, Brown, Kristelle, Pastor, Pau, Lorenzo-Betancor, Oswaldo, Brkanac, Zoran, Scott, Erick, Topol, Eric, Morgan, Kevin, Rogaeva, Ekaterina, Singleton, Andrew B., Hardy, John, Kamboh, M. Ilyas, St George-Hyslop, Peter, Cairns, Nigel, Morris, John C., Kauwe, John S. K., Goate, Alison M.

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Challenges in adapting existing clinical natural language processing systems to multiple, diverse health care settings von Carrell, David S, Schoen, Robert E, Leffler, Daniel A, Morris, Michele, Rose, Sherri, Baer, Andrew, Crockett, Seth D, Gourevitch, Rebecca A, Dean, Katie M, Mehrotra, Ateev

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Using natural language processing to identify problem usage of prescription opioids von Carrell, David S, Cronkite, David, Palmer, Roy E, Saunders, Kathleen, Gross, David E, Masters, Elizabeth T, Hylan, Timothy R, Von Korff, Michael

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Development of a machine learning model to predict mild cognitive impairment using natural language processing in the absence of screening von Penfold, Robert B, Carrell, David S, Cronkite, David J, Pabiniak, Chester, Dodd, Tammy, Glass, Ashley Mh, Johnson, Eric, Thompson, Ella, Arrighi, H Michael, Stang, Paul E

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Physician characteristics associated with higher adenoma detection rate von Mehrotra, Ateev, Morris, Michele, Gourevitch, Rebecca A., Carrell, David S., Leffler, Daniel A., Rose, Sherri, Greer, Julia B., Crockett, Seth D., Baer, Andrew, Schoen, Robert E.

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Toward personalizing treatment for depression: predicting diagnosis and severity von Huang, Sandy H, LePendu, Paea, Iyer, Srinivasan V, Tai-Seale, Ming, Carrell, David, Shah, Nigam H

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Using Natural Language Processing to Improve Efficiency of Manual Chart Abstraction in Research: The Case of Breast Cancer Recurrence von CARRELL, David S, HALGRIM, Scott, TRAN, Diem-Thy, BUIST, Diana S. M, CHUBAK, Jessica, CHAPMAN, Wendy W, SAVOVA, Guergana

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Genome-wide association study identifies four novel loci associated with Alzheimer’s endophenotypes and disease modifiers von Deming, Yuetiva, Li, Zeran, Kapoor, Manav, Harari, Oscar, Del-Aguila, Jorge L., Black, Kathleen, Carrell, David, Cai, Yefei, Fernandez, Maria Victoria, Budde, John, Ma, Shengmei, Saef, Benjamin, Howells, Bill, Huang, Kuan-lin, Bertelsen, Sarah, Fagan, Anne M., Holtzman, David M., Morris, John C., Kim, Sungeun, Saykin, Andrew J., De Jager, Philip L., Albert, Marilyn, Moghekar, Abhay, O’Brien, Richard, Riemenschneider, Matthias, Petersen, Ronald C., Blennow, Kaj, Zetterberg, Henrik, Minthon, Lennart, Van Deerlin, Vivianna M., Lee, Virginia Man-Yee, Shaw, Leslie M., Trojanowski, John Q., Schellenberg, Gerard, Haines, Jonathan L., Mayeux, Richard, Pericak-Vance, Margaret A., Farrer, Lindsay A., Peskind, Elaine R., Li, Ge, Di Narzo, Antonio F., Kauwe, John S. K., Goate, Alison M., Cruchaga, Carlos

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The prevalence of problem opioid use in patients receiving chronic opioid therapy: computer-assisted review of electronic health record clinical notes von Palmer, Roy E., Carrell, David S., Cronkite, David, Saunders, Kathleen, Gross, David E., Masters, Elizabeth, Donevan, Sean, Hylan, Timothy R., Von Kroff, Michael

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