The K = 2 conundrum von Janes, Jasmine K., Miller, Joshua M., Dupuis, Julian R., Malenfant, René M., Gorrell, Jamieson C., Cullingham, Catherine I., Andrew, Rose L.

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Repeated Reticulate Evolution in North American Papilio machaon Group Swallowtail Butterflies von Dupuis, Julian R, Sperling, Felix A H

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HiMAP: Robust phylogenomics from highly multiplexed amplicon sequencing von Dupuis, Julian R., Bremer, Forest T., Kauwe, Angela, San Jose, Michael, Leblanc, Luc, Rubinoff, Daniel, Geib, Scott M.

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Phylogenomic analysis provides diagnostic tools for the identification of Anastrepha fraterculus (Diptera: Tephritidae) species complex von Congrains, Carlos, Dupuis, Julian R., Rodriguez, Erick J., Norrbom, Allen L., Steck, Gary, Sutton, Bruce, Nolazco, Norma, Brito, Reinaldo A., Geib, Scott M.

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Targeted amplicon sequencing of 40 nuclear genes supports a single introduction and rapid radiation of Hawaiian Metrosideros (Myrtaceae) von Dupuis, Julian R., Pillon, Yohan, Sakishima, Tomoko, Gemmill, Chrissen E. C., Chamala, Srikar, Barbazuk, W. Brad, Geib, Scott M., Stacy, Elizabeth A.

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Range‐wide population genomics of the Mexican fruit fly: Toward development of pathway analysis tools von Dupuis, Julian R., Ruiz‐Arce, Raul, Barr, Norman B., Thomas, Donald B., Geib, Scott M.

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snpAIMeR: R package for evaluating ancestry informative marker contributions in non-model population diagnostics von Vertacnik, Kim L, Vernygora, Oksana V, Dupuis, Julian R

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Multi-locus species delimitation in closely related animals and fungi: one marker is not enough von DUPUIS, JULIAN R., ROE, AMANDA D., SPERLING, FELIX A. H.

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Interspecific gene flow obscures phylogenetic relationships in an important insect pest species complex von San Jose, Michael, Doorenweerd, Camiel, Geib, Scott, Barr, Norman, Dupuis, Julian R., Leblanc, Luc, Kauwe, Angela, Morris, Kimberley Y., Rubinoff, Daniel

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Confidently identifying the correct K value using the ΔK method: When does K = 2? von Cullingham, Catherine I., Miller, Joshua M., Peery, Rhiannon M., Dupuis, Julian R., Malenfant, René M., Gorrell, Jamieson C., Janes, Jasmine K.

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HiMAP2: Identifying phylogenetically informative genetic markers from diverse genomic resources von Vernygora, Oksana V., Congrains, Carlos, Geib, Scott M., Dupuis, Julian R.

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Phylogenomic test of mitochondrial clues to archaic ancestors in a group of hybridizing swallowtail butterflies von Dupuis, Julian R., Sperling, Felix A.H.

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Gene flow and climate‐associated genetic variation in a vagile habitat specialist von MacDonald, Zachary G., Dupuis, Julian R., Davis, Corey S., Acorn, John H., Nielsen, Scott E., Sperling, Felix A. H.

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Toward transparent taxonomy: an interactive web-tool for evaluating competing taxonomic arrangements von Vernygora, Oksana V, Sperling, Felix A H, Dupuis, Julian R

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Genomics confirms surprising ecological divergence and isolation in an endangered butterfly von Dupuis, Julian R., Geib, Scott M., Osborne, Kendall H., Rubinoff, Daniel

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Phylogenomics supports incongruence between ecological specialization and taxonomy in a charismatic clade of buck moths von Dupuis, Julian R., Peigler, Richard S., Geib, Scott M., Rubinoff, Daniel

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A comprehensive phylogeny and revised taxonomy illuminate the origin and diversification of the global radiation of Papilio (Lepidoptera: Papilionidae) von Condamine, Fabien L., Allio, Rémi, Reboud, Eliette L., Dupuis, Julian R., Toussaint, Emmanuel F.A., Mazet, Nathan, Hu, Shao-Ji, Lewis, Delano S., Kunte, Krushnamegh, Cotton, Adam M., Sperling, Felix A.H.

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Impact of climate change on the elevational and latitudinal distributions of populations of Tipulidae (Diptera) in Wales, United Kingdom von Devlin, Jack J, Thomas, Robert J, Long, Sarah E, Boardman, Pete, Dupuis, Julian R

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DNA metabarcoding diet analysis in a generalist omnivore: feeding trials reveal the efficacy of extraction kits and a multi‐locus approach for identifying diverse diets von THONGJUED, Kantima, GARCIA, Karina, SCOTT, Delia, GONTHIER, David J., DUPUIS, Julian R.

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Gauging ages of tiger swallowtail butterflies using alternate SNP analyses von Vernygora, Oksana V., Campbell, Erin O., Grishin, Nick V., Sperling, Felix A.H., Dupuis, Julian R.

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