EDGAR: a software framework for the comparative analysis of prokaryotic genomes von Blom, Jochen, Albaum, Stefan P, Doppmeier, Daniel, Pühler, Alfred, Vorhölter, Frank-Jörg, Zakrzewski, Martha, Goesmann, Alexander

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Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming von BLOM, Jochen, JAKOBI, Tobias, DOPPMEIER, Daniel, JAENICKE, Sebastian, KALINOWSKI, Jorn, STOYE, Jens, GOESMANN, Alexander

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Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering von Hackl, Matthias, Jakobi, Tobias, Blom, Jochen, Doppmeier, Daniel, Brinkrolf, Karina, Szczepanowski, Rafael, Bernhart, Stephan H., Siederdissen, Christian Höner zu, Bort, Juan A. Hernandez, Wieser, Matthias, Kunert, Renate, Jeffs, Simon, Hofacker, Ivo L., Goesmann, Alexander, Pühler, Alfred, Borth, Nicole, Grillari, Johannes

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ReadXplorer--visualization and analysis of mapped sequences von Hilker, Rolf, Stadermann, Kai Bernd, Doppmeier, Daniel, Kalinowski, Jörn, Stoye, Jens, Straube, Jasmin, Winnebald, Jörn, Goesmann, Alexander

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