Dysregulated transcriptional responses to SARS-CoV-2 in the periphery von McClain, Micah T., Constantine, Florica J., Henao, Ricardo, Liu, Yiling, Tsalik, Ephraim L., Burke, Thomas W., Steinbrink, Julie M., Petzold, Elizabeth, Nicholson, Bradly P., Rolfe, Robert, Kraft, Bryan D., Kelly, Matthew S., Saban, Daniel R., Yu, Chen, Shen, Xiling, Ko, Emily M., Sempowski, Gregory D., Denny, Thomas N., Ginsburg, Geoffrey S., Woods, Christopher W.

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Influence of HLA-C Expression Level on HIV Control von Apps, Richard, Qi, Ying, Carlson, Jonathan M., Chen, Haoyan, Gao, Xiaojiang, Thomas, Rasmi, Yuki, Yuko, Del Prete, Greg Q., Goulder, Philip, Brumme, Zabrina L., Brumme, Chanson J., John, Mina, Mallal, Simon, Nelson, George, Bosch, Ronald, Heckerman, David, Stein, Judy L., Soderberg, Kelly A., Moody, M. Anthony, Denny, Thomas N., Zeng, Xue, Fang, Jingyuan, Moffett, Ashley, Lifson, Jeffrey D., Goedert, James J., Buchbinder, Susan, Kirk, Gregory D., Fellay, Jacques, McLaren, Paul, Deeks, Steven G., Pereyra, Florencia, Walker, Bruce, Michael, Nelson L., Weintrob, Amy, Wolinsky, Steven, Liao, Wilson, Carrington, Mary

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Breadth of SARS-CoV-2 neutralization and protection induced by a nanoparticle vaccine von Li, Dapeng, Martinez, David R., Schäfer, Alexandra, Chen, Haiyan, Barr, Maggie, Sutherland, Laura L., Lee, Esther, Parks, Robert, Mielke, Dieter, Edwards, Whitney, Newman, Amanda, Bock, Kevin W., Minai, Mahnaz, Nagata, Bianca M., Gagne, Matthew, Douek, Daniel C., DeMarco, C. Todd, Denny, Thomas N., Oguin, Thomas H., Brown, Alecia, Rountree, Wes, Wang, Yunfei, Mansouri, Katayoun, Edwards, Robert J., Ferrari, Guido, Sempowski, Gregory D., Eaton, Amanda, Tang, Juanjie, Cain, Derek W., Santra, Sampa, Pardi, Norbert, Weissman, Drew, Tomai, Mark A., Fox, Christopher B., Moore, Ian N., Andersen, Hanne, Lewis, Mark G., Golding, Hana, Seder, Robert, Khurana, Surender, Baric, Ralph S., Montefiori, David C., Saunders, Kevin O., Haynes, Barton F.

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Evaluation of Commercially Available High-Throughput SARS-CoV-2 Serologic Assays for Serosurveillance and Related Applications von Stone, Mars, Grebe, Eduard, Sulaeman, Hasan, Di Germanio, Clara, Dave, Honey, Kelly, Kathleen, Biggerstaff, Brad J, Crews, Bridgit O, Tran, Nam, Jerome, Keith R, Denny, Thomas N, Hogema, Boris, Destree, Mark, Jones, Jefferson M, Thornburg, Natalie, Simmons, Graham, Krajden, Mel, Kleinman, Steve, Dumont, Larry J, Busch, Michael P

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Phenotypic properties of transmitted founder HIV-1 von Parrish, Nicholas F., Gao, Feng, Li, Hui, Giorgi, Elena E., Barbian, Hannah J., Parrish, Erica H., Zajic, Lara, Iyer, Shilpa S., Decker, Julie M., Kumar, Amit, Hora, Bhavna, Berg, Anna, Cai, Fangping, Hopper, Jennifer, Denny, Thomas N., Ding, Haitao, Ochsenbauer, Christina, Kappes, John C., Galimidi, Rachel P., West, Anthony P., Bjorkman, Pamela J., Wilen, Craig B., Doms, Robert W., O'Brien, Meagan, Bhardwaj, Nina, Borrow, Persephone, Haynes, Barton F., Muldoon, Mark, Theiler, James P., Korber, Bette, Shaw, George M., Hahn, Beatrice H.

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Tissue-specific genetic control of splicing: implications for the study of complex traits von Heinzen, Erin L, Ge, Dongliang, Cronin, Kenneth D, Maia, Jessica M, Shianna, Kevin V, Gabriel, Willow N, Welsh-Bohmer, Kathleen A, Hulette, Christine M, Denny, Thomas N, Goldstein, David B

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Differential chromatin accessibility in peripheral blood mononuclear cells underlies COVID-19 disease severity prior to seroconversion von Giroux, Nicholas S., Ding, Shengli, McClain, Micah T., Burke, Thomas W., Petzold, Elizabeth, Chung, Hong A., Rivera, Grecia O., Wang, Ergang, Xi, Rui, Bose, Shree, Rotstein, Tomer, Nicholson, Bradly P., Chen, Tianyi, Henao, Ricardo, Sempowski, Gregory D., Denny, Thomas N., De Ussel, Maria Iglesias, Satterwhite, Lisa L., Ko, Emily R., Ginsburg, Geoffrey S., Kraft, Bryan D., Tsalik, Ephraim L., Shen, Xiling, Woods, Christopher W.

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T-cell count and T-cell telomere length in patients with severe COVID-19 von Kraft, Bryan D, Verhulst, Simon, Lai, Tsung-Po, Sullenger, Bruce A, Wang, Yunfei, Rountree, Wes, Chen, Lingye, Woods, Christopher W, Denny, Thomas N, Aviv, Abraham

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Reconstructing a B-Cell Clonal Lineage. II. Mutation, Selection, and Affinity Maturation von Kepler, Thomas B, Munshaw, Supriya, Wiehe, Kevin, Zhang, Ruijun, Yu, Jae-Sung, Woods, Christopher W, Denny, Thomas N, Tomaras, Georgia D, Alam, S Munir, Moody, M Anthony, Kelsoe, Garnett, Liao, Hua-Xin, Haynes, Barton F

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SARS-CoV-2 viremia but not respiratory viral load is associated with respiratory complications in patients with severe COVID-19 von Chen, Lingye, Olson, Lyra B, Naqvi, Ibtehaj A, Sullenger, Bruce A, Que, Loretta G, Denny, Thomas N, Kraft, Bryan D

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FlowKit: A Python Toolkit for Integrated Manual and Automated Cytometry Analysis Workflows von White, Scott, Quinn, John, Enzor, Jennifer, Staats, Janet, Mosier, Sarah M., Almarode, James, Denny, Thomas N., Weinhold, Kent J., Ferrari, Guido, Chan, Cliburn

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CD4 enumeration technologies: a systematic review of test performance for determining eligibility for antiretroviral therapy von Peeling, Rosanna W, Sollis, Kimberly A, Glover, Sarah, Crowe, Suzanne M, Landay, Alan L, Cheng, Ben, Barnett, David, Denny, Thomas N, Spira, Thomas J, Stevens, Wendy S, Crowley, Siobhan, Essajee, Shaffiq, Vitoria, Marco, Ford, Nathan

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Author Correction: Differential chromatin accessibility in peripheral blood mononuclear cells underlies COVID-19 disease severity prior to seroconversion von Giroux, Nicholas S., Ding, Shengli, McClain, Micah T., Burke, Thomas W., Petzold, Elizabeth, Chung, Hong A., Rivera, Grecia O., Wang, Ergang, Xi, Rui, Bose, Shree, Rotstein, Tomer, Nicholson, Bradly P., Chen, Tianyi, Henao, Ricardo, Sempowski, Gregory D., Denny, Thomas N., De Ussel, Maria Iglesias, Satterwhite, Lisa L., Ko, Emily R., Ginsburg, Geoffrey S., Kraft, Bryan D., Tsalik, Ephraim L., Shen, Xiling, Woods, Christopher W.

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Increased predominance of HIV-1 CRF01_AE and its recombinants in the Philippines von Chen, Yue, Hora, Bhavna, DeMarco, Todd, Berba, Regina, Register, Heidi, Hood, Sylvia, Carter, Meredith, Stone, Mars, Pappas, Andrea, Sanchez, Ana M, Busch, Michael, Denny, Thomas N, Gao, Feng

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Distinctive variation in the U3R region of the 5' Long Terminal Repeat from diverse HIV-1 strains von Mbondji-Wonje, Christelle, Dong, Ming, Wang, Xue, Zhao, Jiangqin, Ragupathy, Viswanath, Sanchez, Ana M, Denny, Thomas N, Hewlett, Indira

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Multivariate analysis of FcR-mediated NK cell functions identifies unique clustering among humans and rhesus macaques von Tuyishime, Marina, Spreng, Rachel L, Hueber, Brady, Nohara, Junsuke, Goodman, Derrick, Chan, Cliburn, Barfield, Richard, Beck, Whitney E, Jha, Shalini, Asdell, Stephanie, Wiehe, Kevin, He, Max M, Easterhoff, David, Conley, Haleigh E, Hoxie, Taylor, Gurley, Thaddeus, Jones, Caroline, Adhikary, Nihar Deb, Villinger, Francois, Thomas, Rasmi, Denny, Thomas N, Moody, Michael Anthony, Tomaras, Georgia D, Pollara, Justin, Reeves, R Keith, Ferrari, Guido

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Development of an international external quality assurance program for HIV-1 incidence using the Limiting Antigen Avidity assay von Keating, Sheila M, Rountree, Wes, Grebe, Eduard, Pappas, Andrea L, Stone, Mars, Hampton, Dylan, Todd, Christopher A, Poniewierski, Marek S, Sanchez, Ana, Porth, Cassandra G, Denny, Thomas N, Busch, Michael P

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Fast Dissemination of New HIV-1 CRF02/A1 Recombinants in Pakistan von Chen, Yue, Hora, Bhavna, DeMarco, Todd, Shah, Sharaf Ali, Ahmed, Manzoor, Sanchez, Ana M, Su, Chang, Carter, Meredith, Stone, Mars, Hasan, Rumina, Hasan, Zahra, Busch, Michael P, Denny, Thomas N, Gao, Feng

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Phenotypic and Functional Profile of HIV-Inhibitory CD8 T Cells Elicited by Natural Infection and Heterologous Prime/Boost Vaccination von FREEL, Stephanie A, LAMOREAUX, Laurie, DENNY, Thomas N, WEINHOLD, Kent J, FERRARI, Guido, HAYNES, Barton F, KOUP, Richard A, GRAHAM, Barney S, ROEDERER, Mario, TOMARAS, Georgia D, CHATTOPADHYA, Pratip K, SAUNDERS, Kevin, ZARKOWSKY, David, GLENN OVERMAN, R, OCHSENBAUER, Christina, EDMONDS, Tara G, KAPPES, John C, CUNNINGHAM, Coleen K

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Redirection of Cord Blood T Cells and Natural Killer Cells for Elimination of Autologous HIV-1-Infected Target Cells Using Bispecific DART (R) Molecules von Pollara, Justin, Edwards, R. Whitney, Jha, Shalini, Lam, Chia-Ying Kao, Liu, Liqin, Diedrich, Gundo, Nordstrom, Jeffrey L., Huffman, Tori, Pickeral, Joy A., Denny, Thomas N., Permar, Sallie R., Ferrari, Guido

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