Exploring antimicrobial resistance to beta-lactams, aminoglycosides and fluoroquinolones in E. coli and K. pneumoniae using proteogenomics von Foudraine, Dimard E., Strepis, Nikolaos, Stingl, Christoph, ten Kate, Marian T., Verbon, Annelies, Klaassen, Corné H. W., Goessens, Wil H. F., Luider, Theo M., Dekker, Lennard J. M.

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Expression of virulence and antimicrobial related proteins in Burkholderia mallei and Burkholderia pseudomallei von Paauw, Armand, Scholz, Holger C, Mars-Groenendijk, Roos H, Dekker, Lennard J M, Luider, Theo M, van Leeuwen, Hans C

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Rapid and Accurate Detection of Aminoglycoside-Modifying Enzymes and 16S rRNA Methyltransferases by Targeted Liquid Chromatography-Tandem Mass Spectrometry von Foudraine, Dimard E, Strepis, Nikolaos, Klaassen, Corné H W, Raaphorst, Merel N, Verbon, Annelies, Luider, Theo M, Goessens, Wil H F, Dekker, Lennard J M

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Integrating Serum Protein Electrophoresis with Mass Spectrometry, A New Workflow for M‑Protein Detection and Quantification von Zajec, Marina, Jacobs, Joannes F. M, de Kat Angelino, Corrie M, Dekker, Lennard J. M, Stingl, Christoph, Luider, Theo M, De Rijke, Yolanda B, VanDuijn, Martijn M

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Determination of Site-Specific Phosphorylation Ratios in Proteins with Targeted Mass Spectrometry von Dekker, Lennard J. M, Zeneyedpour, Lona, Snoeijers, Sandor, Joore, Jos, Leenstra, Sieger, Luider, Theo M

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Contribution of Neuraminidase to the Efficacy of Seasonal Split Influenza Vaccines in the Ferret Model von Rosu, Miruna E, Kok, Adinda, Bestebroer, Theo M, de Meulder, Dennis, Verveer, Elwin P, Pronk, Mark R, Dekker, Lennard J M, Luider, Theo M, Richard, Mathilde, van den Brand, Judith M A, Fouchier, Ron A M, Herfst, Sander

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Phosphorylation Ratio Determination in Fresh-Frozen and Formalin-Fixed Paraffin-Embedded Tissue with Targeted Mass Spectrometry von Zeneyedpour, Lona, Stingl, Christoph, Dekker, Lennard J. M, Mustafa, Dana A. M, Kros, Johan M, Luider, Theo M

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Sample preparation issues for tissue imaging by imaging MS von Kaletaş, Başak Kükrer, van der Wiel, Ingrid M, Stauber, Jonathan, Güzel, Coşkun, Kros, Johan M, Luider, Theo M, Heeren, Ron M.A

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Identification of a Collagen Marker in Urine Improves the Detection of Colorectal Liver Metastases von van Huizen, Nick A, van Rosmalen, Joost, Dekker, Lennard J. M, Coebergh van den Braak, Robert R. J, Verhoef, Cornelis, IJzermans, Jan N. M, Luider, Theo M

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De Novo Protein Sequencing by Combining Top-Down and Bottom-Up Tandem Mass Spectra von Liu, Xiaowen, Dekker, Lennard J. M, Wu, Si, Vanduijn, Martijn M, Luider, Theo M, Tolić, Nikola, Kou, Qiang, Dvorkin, Mikhail, Alexandrova, Sonya, Vyatkina, Kira, Paša-Tolić, Ljiljana, Pevzner, Pavel A

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Quantitative Proteomic Analysis of Microdissected Breast Cancer Tissues: Comparison of Label-Free and SILAC-based Quantification with Shotgun, Directed, and Targeted MS Approaches von Liu, Ning Qing, Dekker, Lennard J. M, Stingl, Christoph, Güzel, Coşkun, De Marchi, Tommaso, Martens, John W. M, Foekens, John A, Luider, Theo M, Umar, Arzu

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De Novo Sequencing of Peptides from Top-Down Tandem Mass Spectra von Vyatkina, Kira, Wu, Si, Dekker, Lennard J. M, VanDuijn, Martijn M, Liu, Xiaowen, Tolić, Nikola, Dvorkin, Mikhail, Alexandrova, Sonya, Luider, Theo M, Paša-Tolić, Ljiljana, Pevzner, Pavel A

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Metabolic changes related to the IDH1 mutation in gliomas preserve TCA‐cycle activity: An investigation at the protein level von Dekker, Lennard J. M., Wu, Suying, Jurriëns, Cherise, Mustafa, Dana A. N., Grevers, Frederieke, Burgers, Peter C., Sillevis Smitt, Peter A. E., Kros, Johan M., Luider, Theo M.

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Effects of the IDH1 R132H Mutation on the Energy Metabolism: A Comparison between Tissue and Corresponding Primary Glioma Cell Cultures von Dekker, Lennard J. M, Verheul, Cassandra, Wensveen, Nicky, Leenders, William, Lamfers, Martine L. M, Leenstra, Sieger, Luider, Theo M

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Collagen peptides in urine: a new promising biomarker for the detection of colorectal liver metastases von Bröker, Mirelle E E, Lalmahomed, Zarina S, Roest, Henk P, van Huizen, Nick A, Dekker, Lennard J M, Calame, Wim, Verhoef, Cornelis, Ijzermans, Jan N M, Luider, Theo M

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Serum Levels of Pregnancy Zone Protein are Elevated in Presymptomatic Alzheimer’s Disease von IJsselstijn, Linda, Dekker, Lennard J. M, Stingl, Christoph, van der Weiden, Marcel M, Hofman, Albert, Kros, Johan M, Koudstaal, Peter J, Sillevis Smitt, Peter A. E, Ikram, M. Arfan, Breteler, Monique M. B, Luider, Theo M

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Using Targeted Liquid Chromatography-Tandem Mass Spectrometry to Rapidly Detect β-Lactam, Aminoglycoside, and Fluoroquinolone Resistance Mechanisms in Blood Cultures Growing E. col... von Foudraine, Dimard E., Dekker, Lennard J. M., Strepis, Nikolaos, Nispeling, Stan J., Raaphorst, Merel N., Kloezen, Wendy, Colle, Piet, Verbon, Annelies, Klaassen, Corné H. W., Luider, Theo M., Goessens, Wil H. F.

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Peptides from the variable region of specific antibodies are shared among lung cancer patients von de Costa, Dominique, Broodman, Ingrid, Calame, Wim, Stingl, Christoph, Dekker, Lennard J M, Vernhout, René M, de Koning, Harry J, Hoogsteden, Henk C, Sillevis Smitt, Peter A E, van Klaveren, Rob J, Luider, Theo M, Vanduijn, Martijn M

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Accurate Detection of the Four Most Prevalent Carbapenemases in E. coli and K. pneumoniae by High-Resolution Mass Spectrometry von Foudraine, Dimard E, Dekker, Lennard J M, Strepis, Nikolaos, Bexkens, Michiel L, Klaassen, Corné H W, Luider, Theo M, Goessens, Wil H F

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Analysis of Virus and Host Proteomes During Productive HSV-1 and VZV Infection in Human Epithelial Cells von Ouwendijk, Werner J D, Dekker, Lennard J M, van den Ham, Henk-Jan, Lenac Rovis, Tihana, Haefner, Erik S, Jonjic, Stipan, Haas, Jürgen, Luider, Theo M, Verjans, Georges M G M

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