Metagenomic Analysis of the Human Distal Gut Microbiome von Gill, Steven R, Pop, Mihai, DeBoy, Robert T, Eckburg, Paul B, Turnbaugh, Peter J, Samuel, Buck S, Gordon, Jeffrey I, Relman, David A, Fraser-Liggett, Claire M, Nelson, Karen E

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Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice von Fouts, Derrick E, Tyler, Heather L, DeBoy, Robert T, Daugherty, Sean, Ren, Qinghu, Badger, Jonathan H, Durkin, Anthony S, Huot, Heather, Shrivastava, Susmita, Kothari, Sagar, Dodson, Robert J, Mohamoud, Yasmin, Khouri, Hoda, Roesch, Luiz F W, Krogfelt, Karen A, Struve, Carsten, Triplett, Eric W, Methé, Barbara A

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Effect of mupirocin for Staphylococcus aureus decolonization on the microbiome of the nose and throat in community and nursing home dwelling adults von Roghmann, Mary-Claire, Lydecker, Alison D., Shardell, Michelle, DeBoy, Robert T., Johnson, J. Kristie, Zhao, LiCheng, Hittle, Lauren L., Mongodin, Emmanuel F.

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Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1 von Mongodin, Emmanuel F, Shapir, Nir, Daugherty, Sean C, DeBoy, Robert T, Emerson, Joanne B, Shvartzbeyn, Alla, Radune, Diana, Vamathevan, Jessica, Riggs, Florenta, Grinberg, Viktoria, Khouri, Hoda, Wackett, Lawrence P, Nelson, Karen E, Sadowsky, Michael J

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On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales von Zhaxybayeva, Olga, Swithers, Kristen S, Lapierre, Pascal, Fournier, Gregory P, Bickhart, Derek M, DeBoy, Robert T, Nelson, Karen E, Nesbø, Camilla L, Doolittle, W. Ford, Gogarten, J. Peter, Noll, Kenneth M

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Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species von Fouts, Derrick E, Mongodin, Emmanuel F, Mandrell, Robert E, Miller, William G, Rasko, David A, Ravel, Jacques, Brinkac, Lauren M, DeBoy, Robert T, Parker, Craig T, Daugherty, Sean C, Dodson, Robert J, Durkin, A. Scott, Madupu, Ramana, Sullivan, Steven A, Shetty, Jyoti U, Ayodeji, Mobolanle A, Shvartsbeyn, Alla, Schatz, Michael C, Badger, Jonathan H, Fraser, Claire M, Nelson, Karen E

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Insights into Plant Cell Wall Degradation from the Genome Sequence of the Soil Bacterium Cellvibrio japonicus von DEBOY, Robert T, MONGODIN, Emmanuel F, NELSON, Karen E, FOUTS, Derrick E, TAILFORD, Louise E, KHOURI, Hoda, EMERSON, Joanne B, MOHAMOUD, Yasmin, WATKINS, Kisha, HENRISSAT, Bernard, GILBERT, Harry J

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Genome Degradation in Brucella ovis Corresponds with Narrowing of Its Host Range and Tissue Tropism von Tsolis, Renee M, Seshadri, Rekha, Santos, Renato L, Sangari, Felix J, Lobo, Juan M. García, De Jong, Maarten F, Ren, Qinghu, Myers, Garry, Brinkac, Lauren M, Nelson, William C, DeBoy, Robert T, Angiuoli, Samuel, Khouri, Hoda, Dimitrov, George, Robinson, Jeffrey R, Mulligan, Stephanie

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Comparison of the Microbiota of Older Adults Living in Nursing Homes and the Community von Roghmann, Mary-Claire, Lydecker, Alison D, Hittle, Lauren, DeBoy, Robert T, Nowak, Rebecca G, Johnson, J Kristie, Mongodin, Emmanuel F

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Chromosome Evolution in the Thermotogales: Large-Scale Inversions and Strain Diversification of CRISPR Sequences von DEBOY, Robert T, MONGODIN, Emmanuel F, EMERSON, Joanne B, NELSON, Karen E

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Complete Genome Sequences of Mycoplasma leachii Strain PG50T and the Pathogenic Mycoplasma mycoides subsp. mycoides Small Colony Biotype Strain Gladysdale von Wise, Kim S, Calcutt, Michael J, Foecking, Mark F, Madupu, Ramana, DeBoy, Robert T, Röske, Kerstin, Hvinden, Miranda L, Martin, Tara R, Durkin, A. Scott, Glass, John I, Methé, Barbara A

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Insights on Evolution of Virulence and Resistance from the Complete Genome Analysis of an Early Methicillin-Resistant Staphylococcus aureus Strain and a Biofilm-Producing Methicill... von GILL, Steven R, FOUTS, Derrick E, DODSON, Robert J, DAUGHERTY, Sean C, MADUPU, Ramana, ANGIUOLI, Samuel V, DURKIN, A. Scott, HAFT, Daniel H, VAMATHEVAN, Jessica, KHOURI, Hoda, UTTERBACK, Terry, LEE, Chris, ARCHER, Gordon L, DIMITROV, George, LINGXIA JIANG, HAIYING QIN, JAN WEIDMAN, TRAN, Kevin, KANG, Kathy, HANCE, Ioana R, NELSON, Karen E, FRASER, Claire M, MONGODIN, Emmanuel F, DEBOY, Robert T, RAVEL, Jacques, PAULSEN, Ian T, KOLONAY, James F, BRINKAC, Lauren, BEANAN, Mauren

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Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5 von Paulsen, I.T, Press, C.M, Ravel, J, Kobayashi, D.Y, Myers, G.S.A, Mavrodi, D.V, DeBoy, R.T, Seshadri, R, Ren, Q, Madupu, R

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Gene Transfer and Genome Plasticity in Thermotoga maritima, a Model Hyperthermophilic Species von MONGODIN, Emmanuel F, HANCE, Ioana R, DEBOY, Robert T, GILL, Steven R, DAUGHERTY, Sean, HUBER, Robert, FRASER, Claire M, STETTER, Karl, NELSON, Karen E

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The Psychrophilic Lifestyle as Revealed by the Genome Sequence of Colwellia psychrerythraea 34H through Genomic and Proteomic Analyses von Methé, Barbara A., Nelson, Karen E., Deming, Jody W., Momen, Bahram, Melamud, Eugene, Zhang, Xijun, Moult, John, Madupu, Ramana, Nelson, William C., Dodson, Robert J., Brinkac, Lauren M., Daugherty, Sean C., Durkin, Anthony S., DeBoy, Robert T., Kolonay, James F., Sullivan, Steven A., Zhou, Liwei, Davidsen, Tanja M., Wu, Martin, Huston, Adrienne L., Lewis, Matthew, Weaver, Bruce, Weidman, Janice F., Khouri, Hoda, Utterback, Terry R., Feldblyum, Tamara V., Fraser, Claire M.

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Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment von Moran, Mary Ann, Buchan, Alison, González, José M, Heidelberg, John F, Whitman, William B, Kiene, Ronald P, Henriksen, James R, King, Gary M, Belas, Robert, Fuqua, Clay, Brinkac, Lauren, Lewis, Matt, Johri, Shivani, Weaver, Bruce, Pai, Grace, Eisen, Jonathan A, Rahe, Elisha, Sheldon, Wade M, Ye, Wenying, Miller, Todd R, Carlton, Jane, Rasko, David A, Paulsen, Ian T, Ren, Qinghu, Daugherty, Sean C, Deboy, Robert T, Dodson, Robert J, Durkin, A. Scott, Madupu, Ramana, Nelson, William C, Sullivan, Steven A, Rosovitz, M. J, Haft, Daniel H, Selengut, Jeremy, Ward, Naomi

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complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000 von Buell, C. Robin, Joardar, Vinita, Lindeberg, Magdalen, Selengut, Jeremy, Paulsen, Ian T, Gwinn, Michelle L, Dodson, Robert J, Deboy, Robert T, Durkin, A. Scott, Kolonay, James F, Madupu, Ramana, Daugherty, Sean, Brinkac, Lauren, Beanan, Maureen J, Haft, Daniel H, Nelson, William C, Davidsen, Tanja, Zafar, Nikhat, Zhou, Liwei, Liu, Jia, Yuan, Qiaoping, Khouri, Hoda, Fedorova, Nadia, Tran, Bao, Russell, Daniel, Berry, Kristi, Utterback, Teresa, Van Aken, Susan E, Feldblyum, Tamara V, D'Ascenzo, Mark, Deng, Wen-Ling, Ramos, Adela R, Alfano, James R, Cartinhour, Samuel, Chatterjee, Arun K, Delaney, Terrence P, Lazarowitz, Sondra G, Martin, Gregory B, Schneider, David J, Tang, Xiaoyan, Bender, Carol L, White, Owen, Fraser, Claire M, Collmer, Alan

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The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough von Heidelberg, John F, Seshadri, Rekha, Haveman, Shelley A, Hemme, Christopher L, Paulsen, Ian T, Kolonay, James F, Eisen, Jonathan A, Ward, Naomi, Methe, Barbara, Brinkac, Lauren M, Daugherty, Sean C, Deboy, Robert T, Dodson, Robert J, Durkin, A Scott, Madupu, Ramana, Nelson, William C, Sullivan, Steven A, Fouts, Derrick, Haft, Daniel H, Selengut, Jeremy, Peterson, Jeremy D, Davidsen, Tanja M, Zafar, Nikhat, Zhou, Liwei, Radune, Diana, Dimitrov, George, Hance, Mark, Tran, Kevin, Khouri, Hoda, Gill, John, Utterback, Terry R, Feldblyum, Tamara V, Wall, Judy D, Voordouw, Gerrit, Fraser, Claire M

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Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species von Nelson, K.E, Fouts, D.E, Mongodin, E.F, Ravel, J, DeBoy, R.T, Kolonay, J.F, Rasko, D.A, Angiuoli, S.V, Gill, S.R, Paulsen, I.T, Wonderling, L.D, Uhlich, G.A, Bayles, D.O, Luchansky, J.B

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Genome Sequence of the PCE-Dechlorinating Bacterium Dehalococcoides ethenogenes von Seshadri, Rekha, Adrian, Lorenz, Fouts, Derrick E, Eisen, Jonathan A, Phillippy, Adam M, Methe, Barbara A, Ward, Naomi L, Nelson, William C, Deboy, Robert T, Khouri, Hoda M, Kolonay, James F, Dodson, Robert J, Daugherty, Sean C, Brinkac, Lauren M, Sullivan, Steven A, Madupu, Ramana, Nelson, Karen E, Kang, Katherine H, Impraim, Marjorie, Tran, Kevin, Robinson, Jeffrey M, Forberger, Heather A, Fraser, Claire M, Zinder, Stephen H, Heidelberg, John F

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