An open resource for accurately benchmarking small variant and reference calls von Zook, Justin M., McDaniel, Jennifer, Olson, Nathan D., Wagner, Justin, Parikh, Hemang, Heaton, Haynes, Irvine, Sean A., Trigg, Len, Truty, Rebecca, McLean, Cory Y., De La Vega, Francisco M., Xiao, Chunlin, Sherry, Stephen, Salit, Marc

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Molecular profiling of a real-world breast cancer cohort with genetically inferred ancestries reveals actionable tumor biology differences between European ancestry and African anc... von Miyashita, Minoru, Bell, Joshua S K, Wenric, Stephane, Karaesmen, Ezgi, Rhead, Brooke, Kase, Matthew, Kaneva, Kristiyana, De La Vega, Francisco M, Zheng, Yonglan, Yoshimatsu, Toshio F, Khramtsova, Galina, Liu, Fang, Zhao, Fangyuan, Howard, Frederick M, Nanda, Rita, Beaubier, Nike, White, Kevin P, Huo, Dezheng, Olopade, Olufunmilayo I

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Best practices for benchmarking germline small-variant calls in human genomes von Krusche, Peter, Trigg, Len, Boutros, Paul C., Mason, Christopher E., De La Vega, Francisco M., Moore, Benjamin L., Gonzalez-Porta, Mar, Eberle, Michael A., Tezak, Zivana, Lababidi, Samir, Truty, Rebecca, Asimenos, George, Funke, Birgit, Fleharty, Mark, Chapman, Brad A., Salit, Marc, Zook, Justin M.

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Polygenic risk scores: a biased prediction? von De La Vega, Francisco M, Bustamante, Carlos D

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Inexpensive and Highly Reproducible Cloud-Based Variant Calling of 2,535 Human Genomes von Shringarpure, Suyash S, Carroll, Andrew, De La Vega, Francisco M, Bustamante, Carlos D

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Virtual meetings promise to eliminate geographical and administrative barriers and increase accessibility, diversity and inclusivity von Wu, Juncheng, Rajesh, Anushka, Huang, Yu-Ning, Chhugani, Karishma, Acharya, Rajesh, Peng, Kerui, Johnson, Ruth D, Fiscutean, Andrada, Robles-Espinoza, Carla Daniela, De La Vega, Francisco M, Bao, Riyue, Mangul, Serghei

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Racial and Ethnic Differences in Genomic Profiling of Early Onset Colorectal Cancer von Hein, David M, Deng, Weiye, Bleile, MaryLena, Kazmi, Syed Ali, Rhead, Brooke, De La Vega, Francisco M, Jones, Amy L, Kainthla, Radhika, Jiang, Wen, Cantarel, Brandi, Sanford, Nina N

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A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1 von Hampe, Jochen, Schreiber, Stefan, Franke, Andre, Rosenstiel, Philip, Till, Andreas, Teuber, Markus, Huse, Klaus, Albrecht, Mario, Mayr, Gabriele, De La Vega, Francisco M, Briggs, Jason, Günther, Simone, Prescott, Natalie J, Onnie, Clive M, Häsler, Robert, Sipos, Bence, Fölsch, Ulrich R, Lengauer, Thomas, Platzer, Matthias, Mathew, Christopher G, Krawczak, Michael

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Ancestry informative marker sets for determining continental origin and admixture proportions in common populations in America von Kosoy, Roman, Nassir, Rami, Tian, Chao, White, Phoebe A., Butler, Lesley M., Silva, Gabriel, Kittles, Rick, Alarcon‐Riquelme, Marta E., Gregersen, Peter K., Belmont, John W., De La Vega, Francisco M., Seldin, Michael F.

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Evolution of Yeast Noncoding RNAs Reveals an Alternative Mechanism for Widespread Intron Loss von Mitrovich, Quinn M, Tuch, Brian B, De La Vega, Francisco M, Guthrie, Christine, Johnson, Alexander D

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Integrated genomic characterization of ERBB2/HER2 alterations in invasive breast carcinoma: a focus on unusual FISH groups von Yang, Soo-Ryum, Bouhlal, Yosr, De La Vega, Francisco M., Ballard, Morgan, Kuo, Calvin J., Vilborg, Anna, Jensen, Greg, Allison, Kimberly

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Association of genetic ancestry with molecular tumor profiles in colorectal cancer von Rhead, Brooke, Hein, David M, Pouliot, Yannick, Guinney, Justin, De La Vega, Francisco M, Sanford, Nina N

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The transcriptomes of two heritable cell types illuminate the circuit governing their differentiation von Tuch, Brian B, Mitrovich, Quinn M, Homann, Oliver R, Hernday, Aaron D, Monighetti, Cinna K, De La Vega, Francisco M, Johnson, Alexander D

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Identifying selected regions from heterozygosity and divergence using a light-coverage genomic dataset from two human populations von Oleksyk, Taras K, Zhao, Kai, De La Vega, Francisco M, Gilbert, Dennis A, O'Brien, Stephen J, Smith, Michael W

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Discovery and functional characterization of a neomorphic PTEN mutation von Costa, Helio A., Leitner, Michael G., Sos, Martin L., Mavrantoni, Angeliki, Rychkova, Anna, Johnson, Jeffrey R., Newton, Billy W., Yee, Muh-Ching, De La Vega, Francisco M., Ford, James M., Krogan, Nevan J., Shokat, Kevan M., Oliver, Dominik, Halaszovich, Christian R., Bustamante, Carlos D.

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Genomics for the world von Bustamante, Carlos D., De La Vega, Francisco M., Burchard, Esteban G.

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Author Correction: Best practices for benchmarking germline small-variant calls in human genomes von Krusche, Peter, Trigg, Len, Boutros, Paul C., Mason, Christopher E., De La Vega, Francisco M., Moore, Benjamin L., Gonzalez-Porta, Mar, Eberle, Michael A., Tezak, Zivana, Lababidi, Samir, Truty, Rebecca, Asimenos, George, Funke, Birgit, Fleharty, Mark, Chapman, Brad A., Salit, Marc, Zook, Justin M.

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Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations von Tuch, Brian B, Laborde, Rebecca R, Xu, Xing, Gu, Jian, Chung, Christina B, Monighetti, Cinna K, Stanley, Sarah J, Olsen, Kerry D, Kasperbauer, Jan L, Moore, Eric J, Broomer, Adam J, Tan, Ruoying, Brzoska, Pius M, Muller, Matthew W, Siddiqui, Asim S, Asmann, Yan W, Sun, Yongming, Kuersten, Scott, Barker, Melissa A, De La Vega, Francisco M, Smith, David I

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Organoid Modeling of the Tumor Immune Microenvironment von Neal, James T., Li, Xingnan, Zhu, Junjie, Giangarra, Valeria, Grzeskowiak, Caitlin L., Ju, Jihang, Liu, Iris H., Chiou, Shin-Heng, Salahudeen, Ameen A., Smith, Amber R., Deutsch, Brian C., Liao, Lillian, Zemek, Allison J., Zhao, Fan, Karlsson, Kasper, Schultz, Liora M., Metzner, Thomas J., Nadauld, Lincoln D., Tseng, Yuen-Yi, Alkhairy, Sahar, Oh, Coyin, Keskula, Paula, Mendoza-Villanueva, Daniel, De La Vega, Francisco M., Kunz, Pamela L., Liao, Joseph C., Leppert, John T., Sunwoo, John B., Sabatti, Chiara, Boehm, Jesse S., Hahn, William C., Zheng, Grace X.Y., Davis, Mark M., Kuo, Calvin J.

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The status of the human gene catalogue von Amaral, Paulo, Carbonell-Sala, Silvia, De La Vega, Francisco M., Faial, Tiago, Frankish, Adam, Gingeras, Thomas, Guigo, Roderic, Harrow, Jennifer L., Hatzigeorgiou, Artemis G., Johnson, Rory, Murphy, Terence D., Pertea, Mihaela, Pruitt, Kim D., Pujar, Shashikant, Takahashi, Hazuki, Ulitsky, Igor, Varabyou, Ales, Wells, Christine A., Yandell, Mark, Carninci, Piero, Salzberg, Steven L.

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