Neutral vs. non-neutral genetic footprints of Plasmodium falciparum multiclonal infections von Labbé, Frédéric, He, Qixin, Zhan, Qi, Tiedje, Kathryn E, Argyropoulos, Dionne C, Tan, Mun Hua, Ghansah, Anita, Day, Karen P, Pascual, Mercedes

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Hyper-diverse antigenic variation and resilience to transmission-reducing intervention in falciparum malaria von Zhan, Qi, He, Qixin, Tiedje, Kathryn E., Day, Karen P., Pascual, Mercedes

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Competition for hosts modulates vast antigenic diversity to generate persistent strain structure in Plasmodium falciparum von Pilosof, Shai, He, Qixin, Tiedje, Kathryn E, Ruybal-Pesántez, Shazia, Day, Karen P, Pascual, Mercedes

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Author Correction: Population genomics of virulence genes of Plasmodium falciparum in clinical isolates from Uganda von Ruybal-Pesántez, Shazia, Tiedje, Kathryn E., Tonkin-Hill, Gerry, Rask, Thomas S., Kamya, Moses R., Greenhouse, Bryan, Dorsey, Grant, Duffy, Michael F., Day, Karen P.

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The Plasmodium falciparum transcriptome in severe malaria reveals altered expression of genes involved in important processes including surface antigen-encoding var genes von Tonkin-Hill, Gerry Q, Trianty, Leily, Noviyanti, Rintis, Nguyen, Hanh H T, Sebayang, Boni F, Lampah, Daniel A, Marfurt, Jutta, Cobbold, Simon A, Rambhatla, Janavi S, McConville, Malcolm J, Rogerson, Stephen J, Brown, Graham V, Day, Karen P, Price, Ric N, Anstey, Nicholas M, Papenfuss, Anthony T, Duffy, Michael F

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Networks of genetic similarity reveal non-neutral processes shape strain structure in Plasmodium falciparum von He, Qixin, Pilosof, Shai, Tiedje, Kathryn E., Ruybal-Pesántez, Shazia, Artzy-Randrup, Yael, Baskerville, Edward B., Day, Karen P., Pascual, Mercedes

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Evolutionary analyses of the major variant surface antigen-encoding genes reveal population structure of Plasmodium falciparum within and between continents von Tonkin-Hill, Gerry, Ruybal-Pesántez, Shazia, Tiedje, Kathryn E, Rougeron, Virginie, Duffy, Michael F, Zakeri, Sedigheh, Pumpaibool, Tepanata, Harnyuttanakorn, Pongchai, Branch, OraLee H, Ruiz-Mesía, Lastenia, Rask, Thomas S, Prugnolle, Franck, Papenfuss, Anthony T, Chan, Yao-Ban, Day, Karen P

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The P. falciparum alternative histones Pf H2A.Z and Pf H2B.Z are dynamically acetylated and antagonized by PfSir2 histone deacetylases at heterochromatin boundaries von Azizan, Suffian, Selvarajah, Shamista A, Tang, Jingyi, Jeninga, Myriam D, Schulz, Danae, Pareek, Kapil, Herr, Tamara, Day, Karen P, De Koning-Ward, Tania F, Petter, Michaela, Duffy, Michael F

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Performance of SNP barcodes to determine genetic diversity and population structure of Plasmodium falciparum in Africa von Argyropoulos, Dionne C, Tan, Mun Hua, Adobor, Courage, Mensah, Benedicta, Labbé, Frédéric, Tiedje, Kathryn E, Koram, Kwadwo A, Ghansah, Anita, Day, Karen P

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Relationship of circulating Plasmodium falciparum lifecycle stage to circulating parasitemia and total parasite biomass von Duffy, Michael F., Tonkin-Hill, Gerry Q., Trianty, Leily, Noviyanti, Rintis, Nguyen, Hanh H. T., Rambhatla, Janavi S., McConville, Malcolm J., Rogerson, Stephen J., Brown, Graham V., Price, Ric N., Anstey, Nicholas M., Day, Karen P., Papenfuss, Anthony T.

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A molecular epidemiological study of var gene diversity to characterize the reservoir of Plasmodium falciparum in humans in Africa von Chen, Donald S, Barry, Alyssa E, Leliwa-Sytek, Aleksandra, Smith, Terry-Ann, Peterson, Ingrid, Brown, Stuart M, Migot-Nabias, Florence, Deloron, Philippe, Kortok, Moses M, Marsh, Kevin, Daily, Johanna P, Ndiaye, Daouda, Sarr, Ousmane, Mboup, Souleymane, Day, Karen P

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Identifying functional groups among the diverse, recombining antigenic var genes of the malaria parasite Plasmodium falciparum from a local community in Ghana von Rorick, Mary M, Baskerville, Edward B, Rask, Thomas S, Day, Karen P, Pascual, Mercedes

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Population genomics of the immune evasion (var) genes of Plasmodium falciparum von Barry, Alyssa E, Leliwa-Sytek, Aleksandra, Tavul, Livingston, Imrie, Heather, Migot-Nabias, Florence, Brown, Stuart M, McVean, Gilean A V, Day, Karen P

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Frequency-Dependent Competition Between Strains Imparts Persistence to Perturbations in a Model of Plasmodium falciparum Malaria Transmission von He, Qixin, Pilosof, Shai, Tiedje, Kathryn E, Day, Karen P, Pascual, Mercedes

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Epistatic Interactions between apolipoprotein E and hemoglobin S Genes in regulation of malaria parasitemia von Rougeron, Virginie, Woods, Caira M, Tiedje, Kathryn E, Bodeau-Livinec, Florence, Migot-Nabias, Florence, Deloron, Philippe, Luty, Adrian J F, Fowkes, Freya J I, Day, Karen P

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Increased microerythrocyte count in homozygous alpha(+)-thalassaemia contributes to protection against severe malarial anaemia von Fowkes, Freya J I, Allen, Stephen J, Allen, Angela, Alpers, Michael P, Weatherall, David J, Day, Karen P

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Indoor residual spraying with a non-pyrethroid insecticide reduces the reservoir of Plasmodium falciparum in a high-transmission area in northern Ghana von Tiedje, Kathryn E, Oduro, Abraham R, Bangre, Oscar, Amenga-Etego, Lucas, Dadzie, Samuel K, Appawu, Maxwell A, Frempong, Kwadwo, Asoala, Victor, Ruybal-Pésantez, Shazia, Narh, Charles A, Deed, Samantha L, Argyropoulos, Dionne C, Ghansah, Anita, Agyei, Samuel A, Segbaya, Sylvester, Desewu, Kwame, Williams, Ignatius, Simpson, Julie A, Malm, Keziah, Pascual, Mercedes, Koram, Kwadwo A, Day, Karen P

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Individual variation in levels of haptoglobin-related protein in children from Gabon von Imrie, Heather J, Fowkes, Freya J I, Migot-Nabias, Florence, Luty, Adrian J F, Deloron, Philippe, Hajduk, Stephen L, Day, Karen P

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An accurate method for identifying recent recombinants from unaligned sequences von Feng, Qian, Tiedje, Kathryn E, Ruybal-Pesántez, Shazia, Tonkin-Hill, Gerry, Duffy, Michael F, Day, Karen P, Shim, Heejung, Chan, Yao-Ban

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Cross-Species Interactions between Malaria Parasites in Humans von Bruce, Marian C., Donnelly, Christl A., Alpers, Michael P., Galinski, Mary R., Barnwell, John W., Walliker, David, Day, Karen P.

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