Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes von Solomon, Kevin V., Haitjema, Charles H., Henske, John K., Gilmore, Sean P., Borges-Rivera, Diego, Lipzen, Anna, Brewer, Heather M., Purvine, Samuel O., Wright, Aaron T., Theodorou, Michael K., Grigoriev, Igor V., Regev, Aviv, Thompson, Dawn A., O'Malley, Michelle A.

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Comparative Analysis of Gene Regulatory Networks: From Network Reconstruction to Evolution von Thompson, Dawn, Regev, Aviv, Roy, Sushmita

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The evolution, evolvability and engineering of gene regulatory DNA von Vaishnav, Eeshit Dhaval, de Boer, Carl G., Molinet, Jennifer, Yassour, Moran, Fan, Lin, Adiconis, Xian, Thompson, Dawn A., Levin, Joshua Z., Cubillos, Francisco A., Regev, Aviv

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Mitochondrial dysfunction remodels one-carbon metabolism in human cells von Bao, Xiaoyan Robert, Ong, Shao-En, Goldberger, Olga, Peng, Jun, Sharma, Rohit, Thompson, Dawn A, Vafai, Scott B, Cox, Andrew G, Marutani, Eizo, Ichinose, Fumito, Goessling, Wolfram, Regev, Aviv, Carr, Steven A, Clish, Clary B, Mootha, Vamsi K

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Ligand-specific conformational change of the G-protein–coupled receptor ALX/FPR2 determines proresolving functional responses von Cooray, Sadani N., Gobbetti, Thomas, Montero-Melendez, Trinidad, McArthur, Simon, Thompson, Dawn, Clark, Adrian J. L., Flower, Roderick J., Perretti, Mauro

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YMAP: a pipeline for visualization of copy number variation and loss of heterozygosity in eukaryotic pathogens von Abbey, Darren A, Funt, Jason, Lurie-Weinberger, Mor N, Thompson, Dawn A, Regev, Aviv, Myers, Chad L, Berman, Judith

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Comparative Transcriptomics in Yeasts von Thompson, Dawn A.

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Strand-specific RNA sequencing reveals extensive regulated long antisense transcripts that are conserved across yeast species von Yassour, Moran, Pfiffner, Jenna, Levin, Joshua Z, Adiconis, Xian, Gnirke, Andreas, Nusbaum, Chad, Thompson, Dawn-Anne, Friedman, Nir, Regev, Aviv

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Comprehensive comparative analysis of strand-specific RNA sequencing methods von Levin, Joshua Z, Regev, Aviv, Yassour, Moran, Adiconis, Xian, Nusbaum, Chad, Thompson, Dawn Anne, Friedman, Nir, Gnirke, Andreas

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Myeloid PTP1B deficiency protects against atherosclerosis by improving cholesterol homeostasis through an AMPK-dependent mechanism von Oliver, Helk, Ruta, Dekeryte, Thompson, Dawn, Kamli-Salino, Sarah, Philip, Sam, Wilson, Heather M, Mody, Nimesh, Delibegovic, Mirela

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Implementation and program evaluation of trauma-informed care training across state child advocacy centers: An exploratory study von Kenny, Maureen C., Vazquez, Alejandro, Long, Haiying, Thompson, Dawn

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An Out-of-Patagonia migration explains the worldwide diversity and distribution of Saccharomyces eubayanus lineages von Nespolo, Roberto F., Villarroel, Carlos A., Oporto, Christian, Tapia, Sebastian M., Vega-Macaya, Franco, Urbina, Kamila, De Chiara, Matteo, Mozzachiodi, Simone, Mikhalev, Ekaterina, Thompson, Dawn, Larrondo, Luis F., Saenz-Agudelo, Pablo, Liti, Gianni, Cubillos, Francisco A.

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Fenretinide inhibits obesity and fatty liver disease but induces Smpd3 to increase serum ceramides and worsen atherosclerosis in LDLR−/− mice von Thompson, Dawn, Mahmood, Shehroz, Morrice, Nicola, Kamli-Salino, Sarah, Dekeryte, Ruta, Hoffmann, Philip A., Doherty, Mary K., Whitfield, Philip D., Delibegović, Mirela, Mody, Nimesh

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Comparative analysis of RNA sequencing methods for degraded or low-input samples von Adiconis, Xian, Borges-Rivera, Diego, Satija, Rahul, DeLuca, David S, Busby, Michele A, Berlin, Aaron M, Sivachenko, Andrey, Thompson, Dawn Anne, Wysoker, Alec, Fennell, Timothy, Gnirke, Andreas, Pochet, Nathalie, Regev, Aviv, Levin, Joshua Z

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Increased axonal bouton dynamics in the aging mouse cortex von Grillo, Federico W, Song, Sen, Teles-Grilo Ruivo, Leonor M, Huang, Lieven, Gao, Ge, Knott, Graham W, Maco, Bohumil, Ferretti, Valentina, Thompson, Dawn, Little, Graham E, De Paola, Vincenzo

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Zinc Cluster Transcription Factors Alter Virulence in Candida albicans von Issi, Luca, Farrer, Rhys A, Pastor, Kelly, Landry, Benjamin, Delorey, Toni, Bell, George W, Thompson, Dawn A, Cuomo, Christina A, Rao, Reeta P

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Extracting data from the muck: deriving biological insight from complex microbial communities and non-model organisms with next generation sequencing von Solomon, Kevin V, Haitjema, Charles H, Thompson, Dawn A, O’Malley, Michelle A

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Comparative Functional Genomics of the Fission Yeasts von Rhind, Nicholas, Chen, Zehua, Yassour, Moran, Thompson, Dawn A., Haas, Brian J., Habib, Naomi, Wapinski, Ilan, Roy, Sushmita, Lin, Michael F., Heiman, David I., Young, Sarah K., Furuya, Kanji, Guo, Yabin, Pidoux, Alison, Chen, Huei Mei, Robbertse, Barbara, Goldberg, Jonathan M., Aoki, Keita, Bayne, Elizabeth H., Berlin, Aaron M., Desjardins, Christopher A., Dobbs, Edward, Dukaj, Livio, Fan, Lin, FitzGerald, Michael G., French, Courtney, Gujja, Sharvari, Hansen, Klavs, Keifenheim, Dan, Levin, Joshua Z., Mosher, Rebecca A., Müller, Carolin A., Pfiffner, Jenna, Priest, Margaret, Russ, Carsten, Smialowska, Agata, Swoboda, Peter, Sykes, Sean M., Vaughn, Matthew, Vengrova, Sonya, Yoder, Ryan, Zeng, Qiandong, Allshire, Robin, Baulcombe, David, Birren, Bruce W., Brown, William, Ekwall, Karl, Kellis, Manolis, Leatherwood, Janet, Levin, Henry, Margalit, Hanah, Martienssen, Rob, Nieduszynski, Conrad A., Spatafora, Joseph W., Friedman, Nir, Dalgaard, Jacob Z., Baumann, Peter, Niki, Hironori, Regev, Aviv, Nusbaum, Chad

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Sphingosine Kinase 1 Is an Intracellular Effector of Phosphatidic Acid von Delon, Christine, Manifava, Maria, Wood, Eleanor, Thompson, Dawn, Krugmann, Sonja, Pyne, Susan, Ktistakis, Nicholas T

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Detection of Betanodavirus in experimentally infected European seabass (Dicentrarchus labrax, Linnaeus 1758) using non‐lethal sampling methods von Ferreira, Inês Almeida, Costa, Janina Z., Macchia, Valeria, Dawn Thompson, Kimberly, Baptista, Teresa

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