MUMmer4: A fast and versatile genome alignment system von Marçais, Guillaume, Delcher, Arthur L, Phillippy, Adam M, Coston, Rachel, Salzberg, Steven L, Zimin, Aleksey

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Apollo: Democratizing genome annotation von Dunn, Nathan A, Unni, Deepak R, Diesh, Colin, Munoz-Torres, Monica, Harris, Nomi L, Yao, Eric, Rasche, Helena, Holmes, Ian H, Elsik, Christine G, Lewis, Suzanna E

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riboWaltz: Optimization of ribosome P-site positioning in ribosome profiling data von Lauria, Fabio, Tebaldi, Toma, Bernabò, Paola, Groen, Ewout J N, Gillingwater, Thomas H, Viero, Gabriella

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COBRAme: A computational framework for genome-scale models of metabolism and gene expression von Lloyd, Colton J, Ebrahim, Ali, Yang, Laurence, King, Zachary A, Catoiu, Edward, O'Brien, Edward J, Liu, Joanne K, Palsson, Bernhard O

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Prediction of antibiotic resistance in Escherichia coli from large-scale pan-genome data von Moradigaravand, Danesh, Palm, Martin, Farewell, Anne, Mustonen, Ville, Warringer, Jonas, Parts, Leopold

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SME Surface Mining Handbook von Darling, Peter

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SME Underground Mining Handbook von Darling, Peter

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Recentrifuge: Robust comparative analysis and contamination removal for metagenomics von Martí, Jose Manuel

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Bayesian phylodynamic inference with complex models von Volz, Erik M, Siveroni, Igor

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NUFEB: A massively parallel simulator for individual-based modelling of microbial communities von Li, Bowen, Taniguchi, Denis, Gedara, Jayathilake Pahala, Gogulancea, Valentina, Gonzalez-Cabaleiro, Rebeca, Chen, Jinju, McGough, Andrew Stephen, Ofiteru, Irina Dana, Curtis, Thomas P, Zuliani, Paolo

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Parodontgel® on Wound Healing and Patient-Reported Outcome Measures (PROMs) after Tunneled Coronally Advanced Flap (TCAF) von Mancini, Leonardo, Mancini, Vincenzo

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The number of k-mer matches between two DNA sequences as a function of k and applications to estimate phylogenetic distances von Röhling, Sophie, Linne, Alexander, Schellhorn, Jendrik, Hosseini, Morteza, Dencker, Thomas, Morgenstern, Burkhard

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clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets von Risso, Davide, Purvis, Liam, Fletcher, Russell B, Das, Diya, Ngai, John, Dudoit, Sandrine, Purdom, Elizabeth

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MimicrEE2: Genome-wide forward simulations of Evolve and Resequencing studies von Vlachos, Christos, Kofler, Robert

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CovCopCan: An efficient tool to detect Copy Number Variation from amplicon sequencing data in inherited diseases and cancer von Derouault, Paco, Chauzeix, Jasmine, Rizzo, David, Miressi, Federica, Magdelaine, Corinne, Bourthoumieu, Sylvie, Durand, Karine, Dzugan, Hélène, Feuillard, Jean, Sturtz, Franck, Mérillou, Stéphane, Lia, Anne-Sophie

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Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm von Bliven, Spencer E, Lafita, Aleix, Rose, Peter W, Capitani, Guido, Prlić, Andreas, Bourne, Philip E

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Adenoid (Acantholytic) Squamous Cell Carcinoma of Mandibular Gingiva von Raut, T., Keshwar, S., Jaisani, M. R., Shrestha, A.

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XPRESSyourself: Enhancing, standardizing, and automating ribosome profiling computational analyses yields improved insight into data von Berg, Jordan A, Belyeu, Jonathan R, Morgan, Jeffrey T, Ouyang, Yeyun, Bott, Alex J, Quinlan, Aaron R, Gertz, Jason, Rutter, Jared

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A Case of Buccal Clear Cell Carcinoma Caused by Rare Fusion Gene: EWSR1-CREM von Hoshino, Miyako, Inoue, Katsuyuki, Kaneda, Tomohisa, Nishimura, Michiko, Kusama, Kaoru, Sakashita, Hideaki, Sato, Yukiko, Takeuchi, Kengo, Nagao, Toshitaka, Kikuchi, Kentaro

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Against Reduction: Designing a Human Future with Machines von Arista, Noelani, Costanza-Chock, Sasha, Ghazavi, Vafa, Kite, Suzanne, Klusmeier, Cathryn, Lewis, Jason Edward, Pechawis, Archer, Sawyer, Jaclyn, Zhang, Gary Zhexi, Zhang, Snoweria

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