Advances in de Novo Drug Design: From Conventional to Machine Learning Methods von Mouchlis, Varnavas D, Afantitis, Antreas, Serra, Angela, Fratello, Michele, Papadiamantis, Anastasios G, Aidinis, Vassilis, Lynch, Iseult, Greco, Dario, Melagraki, Georgia

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Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility von Reinius, Lovisa E, Acevedo, Nathalie, Joerink, Maaike, Pershagen, Göran, Dahlén, Sven-Erik, Greco, Dario, Söderhäll, Cilla, Scheynius, Annika, Kere, Juha

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Microbe-host interplay in atopic dermatitis and psoriasis von Fyhrquist, Nanna, Muirhead, Gareth, Prast-Nielsen, Stefanie, Jeanmougin, Marine, Olah, Peter, Skoog, Tiina, Jules-Clement, Gerome, Feld, Micha, Barrientos-Somarribas, Mauricio, Sinkko, Hanna, van den Bogaard, Ellen H., Zeeuwen, Patrick L.J.M., Rikken, Gijs, Schalkwijk, Joost, Niehues, Hanna, Däubener, Walter, Eller, Silvia Kathrin, Alexander, Helen, Pennino, Davide, Suomela, Sari, Tessas, Ioannis, Lybeck, Emilia, Baran, Anna M., Darban, Hamid, Gangwar, Roopesh Singh, Gerstel, Ulrich, Jahn, Katharina, Karisola, Piia, Yan, Lee, Hansmann, Britta, Katayama, Shintaro, Meller, Stephan, Bylesjö, Max, Hupé, Philippe, Levi-Schaffer, Francesca, Greco, Dario, Ranki, Annamari, Schröder, Jens M., Barker, Jonathan, Kere, Juha, Tsoka, Sophia, Lauerma, Antti, Soumelis, Vassili, Nestle, Frank O., Homey, Bernhard, Andersson, Björn, Alenius, Harri

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CpGmotifs: a tool to discover DNA motifs associated to CpG methylation events von Scala, Giovanni, Federico, Antonio, Greco, Dario

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FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments von Scala, Giovanni, Serra, Angela, Marwah, Veer Singh, Saarimäki, Laura Aliisa, Greco, Dario

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Signals of pseudo-starvation unveil the amino acid transporter SLC7A11 as key determinant in the control of Treg cell proliferative potential von Procaccini, Claudio, Garavelli, Silvia, Carbone, Fortunata, Di Silvestre, Dario, La Rocca, Claudia, Greco, Dario, Colamatteo, Alessandra, Lepore, Maria Teresa, Russo, Claudia, De Rosa, Giusy, Faicchia, Deriggio, Prattichizzo, Francesco, Grossi, Sarah, Campomenosi, Paola, Buttari, Fabio, Mauri, Pierluigi, Uccelli, Antonio, Salvetti, Marco, Brescia Morra, Vincenzo, Vella, Danila, Galgani, Mario, Mottola, Maria, Zuccarelli, Bruno, Lanzillo, Roberta, Maniscalco, Giorgia Teresa, Centonze, Diego, de Candia, Paola, Matarese, Giuseppe

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IntEREst: intron-exon retention estimator von Oghabian, Ali, Greco, Dario, Frilander, Mikko J

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Clustering based approach for population level identification of condition-associated T-cell receptor β-chain CDR3 sequences von Yohannes, Dawit A, Kaukinen, Katri, Kurppa, Kalle, Saavalainen, Päivi, Greco, Dario

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Inhalation and Oropharyngeal Aspiration Exposure to Rod-Like Carbon Nanotubes Induce Similar Airway Inflammation and Biological Responses in Mouse Lungs von Kinaret, Pia, Ilves, Marit, Fortino, Vittorio, Rydman, Elina, Karisola, Piia, Lähde, Anna, Koivisto, Joonas, Jokiniemi, Jorma, Wolff, Henrik, Savolainen, Kai, Greco, Dario, Alenius, Harri

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Drug repositioning: a machine-learning approach through data integration von Napolitano, Francesco, Zhao, Yan, Moreira, Vânia M, Tagliaferri, Roberto, Kere, Juha, D’Amato, Mauro, Greco, Dario

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Acinetobacter species in the skin microbiota protect against allergic sensitization and inflammation von Fyhrquist, Nanna, PhD, Ruokolainen, Lasse, PhD, Suomalainen, Alina, BSc, Lehtimäki, Sari, PhD, Veckman, Ville, PhD, Vendelin, Johanna, PhD, Karisola, Piia, PhD, Lehto, Maili, PhD, Savinko, Terhi, PhD, Jarva, Hanna, MD, Kosunen, Timo U., MD, Corander, Jukka, PhD, Auvinen, Petri, PhD, Paulin, Lars, PhD, von Hertzen, Leena, PhD, Laatikainen, Tiina, PhD, Mäkelä, Mika, MD, Haahtela, Tari, MD, Greco, Dario, PhD, Hanski, Ilkka, PhD, Alenius, Harri, PhD

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IL-17/Th17 pathway is activated in acne lesions von Kelhälä, Hanna-Leena, Palatsi, Riitta, Fyhrquist, Nanna, Lehtimäki, Sari, Väyrynen, Juha P, Kallioinen, Matti, Kubin, Minna E, Greco, Dario, Tasanen, Kaisa, Alenius, Harri, Bertino, Beatrice, Carlavan, Isabelle, Mehul, Bruno, Déret, Sophie, Reiniche, Pascale, Martel, Philippe, Marty, Carine, Blume-Peytavi, Ulrike, Voegel, Johannes J, Lauerma, Antti

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OxLDL sensitizes platelets for increased formation of extracellular vesicles capable of finetuning macrophage gene expression von Maaninka, Katariina, Neuvonen, Maarit, Kerkelä, Erja, Hyvärinen, Kati, Palviainen, Mari, Kamali-Moghaddam, Masood, Federico, Antonio, Greco, Dario, Laitinen, Saara, Öörni, Katariina, Siljander, Pia RM

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Biomarkers of nanomaterials hazard from multi-layer data von Fortino, Vittorio, Kinaret, Pia Anneli Sofia, Fratello, Michele, Serra, Angela, Saarimäki, Laura Aliisa, Gallud, Audrey, Gupta, Govind, Vales, Gerard, Correia, Manuel, Rasool, Omid, Ytterberg, Jimmy, Monopoli, Marco, Skoog, Tiina, Ritchie, Peter, Moya, Sergio, Vázquez-Campos, Socorro, Handy, Richard, Grafström, Roland, Tran, Lang, Zubarev, Roman, Lahesmaa, Riitta, Dawson, Kenneth, Loeschner, Katrin, Larsen, Erik Husfeldt, Krombach, Fritz, Norppa, Hannu, Kere, Juha, Savolainen, Kai, Alenius, Harri, Fadeel, Bengt, Greco, Dario

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A robust and accurate method for feature selection and prioritization from multi-class OMICs data von Fortino, Vittorio, Kinaret, Pia, Fyhrquist, Nanna, Alenius, Harri, Greco, Dario

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NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment von Afantitis, Antreas, Melagraki, Georgia, Isigonis, Panagiotis, Tsoumanis, Andreas, Varsou, Dimitra Danai, Valsami-Jones, Eugenia, Papadiamantis, Anastasios, Ellis, Laura-Jayne A., Sarimveis, Haralambos, Doganis, Philip, Karatzas, Pantelis, Tsiros, Periklis, Liampa, Irene, Lobaskin, Vladimir, Greco, Dario, Serra, Angela, Kinaret, Pia Anneli Sofia, Saarimäki, Laura Aliisa, Grafström, Roland, Kohonen, Pekka, Nymark, Penny, Willighagen, Egon, Puzyn, Tomasz, Rybinska-Fryca, Anna, Lyubartsev, Alexander, Alstrup Jensen, Keld, Brandenburg, Jan Gerit, Lofts, Stephen, Svendsen, Claus, Harrison, Samuel, Maier, Dieter, Tamm, Kaido, Jänes, Jaak, Sikk, Lauri, Dusinska, Maria, Longhin, Eleonora, Rundén-Pran, Elise, Mariussen, Espen, El Yamani, Naouale, Unger, Wolfgang, Radnik, Jörg, Tropsha, Alexander, Cohen, Yoram, Leszczynski, Jerzy, Ogilvie Hendren, Christine, Wiesner, Mark, Winkler, David, Suzuki, Noriyuki, Yoon, Tae Hyun, Choi, Jang-Sik, Sanabria, Natasha, Gulumian, Mary, Lynch, Iseult

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Gain-of-function CEBPE mutation causes noncanonical autoinflammatory inflammasomopathy von Göös, Helka, Fogarty, Christopher L., Sahu, Biswajyoti, Plagnol, Vincent, Rajamäki, Kristiina, Nurmi, Katariina, Liu, Xiaonan, Einarsdottir, Elisabet, Jouppila, Annukka, Pettersson, Tom, Vihinen, Helena, Krjutskov, Kaarel, Saavalainen, Päivi, Järvinen, Asko, Muurinen, Mari, Greco, Dario, Scala, Giovanni, Curtis, James, Nordström, Dan, Flaumenhaft, Robert, Vaarala, Outi, Kovanen, Panu E., Keskitalo, Salla, Ranki, Annamari, Kere, Juha, Lehto, Markku, Notarangelo, Luigi D., Nejentsev, Sergey, Eklund, Kari K., Varjosalo, Markku, Taipale, Jussi, Seppänen, Mikko R.J.

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Gene expression in human NAFLD von Greco, Dario, Kotronen, Anna, Westerbacka, Jukka, Puig, Oscar, Arkkila, Perttu, Kiviluoto, Tuula, Laitinen, Saara, Kolak, Maria, Fisher, Rachel M, Hamsten, Anders, Auvinen, Petri, Yki-Järvinen, Hannele

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A Mitochondrial Ribosomal and RNA Decay Pathway Blocks Cell Proliferation von Richter, Uwe, Lahtinen, Taina, Marttinen, Paula, Myöhänen, Maarit, Greco, Dario, Cannino, Giuseppe, Jacobs, Howard T., Lietzén, Niina, Nyman, Tuula A., Battersby, Brendan J.

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An integrated quantitative structure and mechanism of action-activity relationship model of human serum albumin binding von Serra, Angela, Önlü, Serli, Coretto, Pietro, Greco, Dario

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