MADE4: an R package for multivariate analysis of gene expression data von Culhane, Aedín C., Thioulouse, Jean, Perrière, Guy, Higgins, Desmond G.

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Expression Profiler: next generation—an online platform for analysis of microarray data von Kapushesky, Misha, Kemmeren, Patrick, Culhane, Aedín C., Durinck, Steffen, Ihmels, Jan, Körner, Christine, Kull, Meelis, Torrente, Aurora, Sarkans, Ugis, Vilo, Jaak, Brazma, Alvis

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GeneSigDB: a manually curated database and resource for analysis of gene expression signatures von Culhane, Aedín C., Schröder, Markus S., Sultana, Razvan, Picard, Shaita C., Martinelli, Enzo N., Kelly, Caroline, Haibe-Kains, Benjamin, Kapushesky, Misha, St Pierre, Anne-Alyssa, Flahive, William, Picard, Kermshlise C., Gusenleitner, Daniel, Papenhausen, Gerald, O'Connor, Niall, Correll, Mick, Quackenbush, John

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Analysis of differential gene expression in colorectal cancer and stroma using fluorescence-activated cell sorting purification von Smith, M J, Culhane, A C, Donovan, M, Coffey, J C, Barry, B D, Kelly, M A, Higgins, D G, Wang, J H, Kirwan, W O, Cotter, T G, Redmond, H P

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Oligonucleotide microarray analysis of gene expression in neuroblastoma displaying loss of chromosome 11q von McArdle, L., McDermott, M., Purcell, R., Grehan, D., O'Meara, A., Breatnach, F., Catchpoole, D., Culhane, A. C., Jeffery, I., Gallagher, W. M., Stallings, R. L.

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The cocaine- and amphetamine-regulated transcript mediates ligand-independent activation of ERα, and is an independent prognostic factor in node-negative breast cancer von Brennan, D J, O'Connor, D P, Laursen, H, McGee, S F, McCarthy, S, Zagozdzon, R, Rexhepaj, E, Culhane, A C, Martin, F M, Duffy, M J, Landberg, G, Ryden, L, Hewitt, S M, Kuhar, M J, Bernards, R, Millikan, R C, Crown, J P, Jirström, K, Gallagher, W M

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Cloning of rat brain interleukin-18 cDNA von CULHANE, A. C, HALL, M. D, ROTHWELL, N. J, LUHESHI, G. N

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Between-group analysis of microarray data von Culhane, Aedín C., Perrière, Guy, Considine, Elizabeth C., Cotter, Thomas G., Higgins, Desmond G.

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Apoptosis: Molecular Regulation of Cell Death von Hale, Annette J., Smith, Christopher A., Sutherland, Leslie C., Stoneman, Victoria E. A., Longthorne, Vanessa L., Culhane, Aedín C., Williams, Gwyn T.

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Molecular profiling of breast cancer: transcriptomic studies and beyond von Culhane, A C, Howlin, J

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Common Molecular Mechanisms of Mammary Gland Development and Breast Cancer: Molecular profiling of breast cancer: transcriptomic studies and beyond von Culhane, A. C., Howlin, J.

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Risk of hydroxychloroquine alone and in combination with azithromycin in the treatment of rheumatoid arthritis: a multinational, retrospective study von Lane, Jennifer C E, Weaver, James, Kostka, Kristin, Duarte-Salles, Talita, Abrahao, Maria Tereza F, Alghoul, Heba, Alser, Osaid, Alshammari, Thamir M, Biedermann, Patricia, Banda, Juan M, Burn, Edward, Casajust, Paula, Conover, Mitchell M, Culhane, Aedin C, Davydov, Alexander, DuVall, Scott L, Dymshyts, Dmitry, Fernandez-Bertolin, Sergio, Fišter, Kristina, Hardin, Jill, Hester, Laura, Hripcsak, George, Kaas-Hansen, Benjamin Skov, Kent, Seamus, Khosla, Sajan, Kolovos, Spyros, Lambert, Christophe G, van der Lei, Johan, Lynch, Kristine E, Makadia, Rupa, Margulis, Andrea V, Matheny, Michael E, Mehta, Paras, Morales, Daniel R, Morgan-Stewart, Henry, Mosseveld, Mees, Newby, Danielle, Nyberg, Fredrik, Ostropolets, Anna, Park, Rae Woong, Prats-Uribe, Albert, Rao, Gowtham A, Reich, Christian, Reps, Jenna, Rijnbeek, Peter, Sathappan, Selva Muthu Kumaran, Schuemie, Martijn, Seager, Sarah, Sena, Anthony G, Shoaibi, Azza, Spotnitz, Matthew, Suchard, Marc A, Torre, Carmen O, Vizcaya, David, Wen, Haini, de Wilde, Marcel, Xie, Junqing, You, Seng Chan, Zhang, Lin, Zhuk, Oleg, Ryan, Patrick, Prieto-Alhambra, Daniel

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Deep phenotyping of 34,128 adult patients hospitalised with COVID-19 in an international network study von Burn, Edward, You, Seng Chan, Sena, Anthony G., Kostka, Kristin, Abedtash, Hamed, Abrahão, Maria Tereza F., Alberga, Amanda, Alghoul, Heba, Alser, Osaid, Alshammari, Thamir M., Aragon, Maria, Areia, Carlos, Banda, Juan M., Cho, Jaehyeong, Culhane, Aedin C., Davydov, Alexander, DeFalco, Frank J., Duarte-Salles, Talita, DuVall, Scott, Falconer, Thomas, Fernandez-Bertolin, Sergio, Gao, Weihua, Golozar, Asieh, Hardin, Jill, Hripcsak, George, Huser, Vojtech, Jeon, Hokyun, Jing, Yonghua, Jung, Chi Young, Kaas-Hansen, Benjamin Skov, Kaduk, Denys, Kent, Seamus, Kim, Yeesuk, Kolovos, Spyros, Lane, Jennifer C. E., Lee, Hyejin, Lynch, Kristine E., Makadia, Rupa, Matheny, Michael E., Mehta, Paras P., Morales, Daniel R., Natarajan, Karthik, Nyberg, Fredrik, Ostropolets, Anna, Park, Rae Woong, Park, Jimyung, Posada, Jose D., Prats-Uribe, Albert, Rao, Gowtham, Reich, Christian, Rho, Yeunsook, Rijnbeek, Peter, Schilling, Lisa M., Schuemie, Martijn, Shah, Nigam H., Shoaibi, Azza, Song, Seokyoung, Spotnitz, Matthew, Suchard, Marc A., Swerdel, Joel N., Vizcaya, David, Volpe, Salvatore, Wen, Haini, Williams, Andrew E., Yimer, Belay B., Zhang, Lin, Zhuk, Oleg, Prieto-Alhambra, Daniel, Ryan, Patrick

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Detection of the interleukin 18 family in rat brain by RT-PCR von Wheeler, Rachel D, Culhane, Aedin C, Hall, Matthew D, Pickering-Brown, Stuart, Rothwell, Nancy J, Luheshi, Giamal N

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Software for the Integration of Multiomics Experiments in Bioconductor von Ramos, Marcel, Schiffer, Lucas, Re, Angela, Azhar, Rimsha, Basunia, Azfar, Rodriguez, Carmen, Chan, Tiffany, Chapman, Phil, Davis, Sean R, Gomez-Cabrero, David, Culhane, Aedin C, Haibe-Kains, Benjamin, Hansen, Kasper D, Kodali, Hanish, Louis, Marie S, Mer, Arvind S, Riester, Markus, Morgan, Martin, Carey, Vince, Waldron, Levi

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The 1+Million Genomes Minimal Dataset for Cancer von Riba, Michela, Sala, Cinzia, Culhane, Aedin C., Flobak, Åsmund, Patocs, Attila, Boye, Kjetil, Plevova, Karla, Pospíšilová, Šárka, Gandolfi, Giorgia, Morelli, Marco J., Bucci, Gabriele, Edsjö, Anders, Lassen, Ulrik, Al-Shahrour, Fátima, Lopez-Bigas, Nuria, Hovland, Randi, Cuppen, Edwin, Valencia, Alfonso, Poirel, Helene A., Rosenquist, Richard, Scollen, Serena, Arenas Marquez, Juan, Belien, Jeroen, De Nicolo, Arcangela, De Maria, Ruggero, Torrents, David, Tonon, Giovanni

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Public data and open source tools for multi-assay genomic investigation of disease von Kannan, Lavanya, Ramos, Marcel, Re, Angela, El-Hachem, Nehme, Safikhani, Zhaleh, Gendoo, Deena M A, Davis, Sean, Gomez-Cabrero, David, Castelo, Robert, Hansen, Kasper D, Carey, Vincent J, Morgan, Martin, Culhane, Aedín C, Haibe-Kains, Benjamin, Waldron, Levi

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Functional classification analysis of somatically mutated genes in human breast and colorectal cancers von Chittenden, Thomas W., Howe, Eleanor A., Culhane, Aedin C., Sultana, Razvan, Taylor, Jennifer M., Holmes, Chris, Quackenbush, John

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Apoptosis: molecular regulation of cell death von Hale, A J, Smith, C A, Sutherland, L C, Stoneman, V E, Longthorne, V, Culhane, A C, Williams, G T

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Cross-platform comparison and visualisation of gene expression data using co-inertia analysis von Culhane, Aedín C, Perrière, Guy, Higgins, Desmond G

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