Research in Computational Molecular Biology: 23rd Annual International Conference, RECOMB 2019, Washington, DC, USA, May 5-8, 2019, Proceedings von Cowen, Lenore J

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Going the distance for protein function prediction: a new distance metric for protein interaction networks von Cao, Mengfei, Zhang, Hao, Park, Jisoo, Daniels, Noah M, Crovella, Mark E, Cowen, Lenore J, Hescott, Benjamin

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Compressive genomics for protein databases von Daniels, Noah M, Gallant, Andrew, Peng, Jian, Cowen, Lenore J, Baym, Michael, Berger, Bonnie

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BETASCAN: probable beta-amyloids identified by pairwise probabilistic analysis von Bryan, Jr, Allen W, Menke, Matthew, Cowen, Lenore J, Lindquist, Susan L, Berger, Bonnie

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Formatt: Correcting protein multiple structural alignments by incorporating sequence alignment von Daniels, Noah M, Nadimpalli, Shilpa, Cowen, Lenore J

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GLIDE: combining local methods and diffusion state embeddings to predict missing interactions in biological networks von Devkota, Kapil, Murphy, James M, Cowen, Lenore J

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Fault tolerance in protein interaction networks: stable bipartite subgraphs and redundant pathways von Brady, Arthur, Maxwell, Kyle, Daniels, Noah, Cowen, Lenore J

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Efficient Construction of a Complete Index for Pan-Genomics Read Alignment von Kuhnle, Alan, Mun, Taher, Boucher, Christina, Gagie, Travis, Langmead, Ben, Manzini, Giovanni

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RENET: A Deep Learning Approach for Extracting Gene-Disease Associations from Literature von Wu, Ye, Luo, Ruibang, Leung, Henry C. M., Ting, Hing-Fung, Lam, Tak-Wah

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New directions for diffusion-based network prediction of protein function: incorporating pathways with confidence von Cao, Mengfei, Pietras, Christopher M, Feng, Xian, Doroschak, Kathryn J, Schaffner, Thomas, Park, Jisoo, Zhang, Hao, Cowen, Lenore J, Hescott, Benjamin J

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GLIDER: function prediction from GLIDE-based neighborhoods von Devkota, Kapil, Schmidt, Henri, Werenski, Matt, Murphy, James M, Erden, Mert, Arsenescu, Victor, Cowen, Lenore J

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Majority Vote Cascading: A Semi-Supervised Framework for Improving Protein Function Prediction von Lazarsfeld, John, Rodriguez, Jonathan, Erden, Mert, Liu, Yuelin, Cowen, Lenore J.

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Correction: Going the Distance for Protein Function Prediction: A New Distance Metric for Protein Interaction Networks von Cao, Mengfei, Zhang, Hao, Park, Jisoo, Daniels, Noah M., Crovella, Mark E., Cowen, Lenore J., Hescott, Benjamin

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MethCP: Differentially Methylated Region Detection with Change Point Models von Gong, Boying, Purdom, Elizabeth

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Bioengineered models of Parkinson’s disease using patient-derived dopaminergic neurons exhibit distinct biological profiles in a 3D microenvironment von Fiore, Nicholas J., Ganat, Yosif M., Devkota, Kapil, Batorsky, Rebecca, Lei, Ming, Lee, Kyongbum, Cowen, Lenore J., Croft, Gist, Noggle, Scott A., Nieland, Thomas J. F., Kaplan, David L.

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Genecentric: a package to uncover graph-theoretic structure in high-throughput epistasis data von Gallant, Andrew, Leiserson, Mark D M, Kachalov, Maxim, Cowen, Lenore J, Hescott, Benjamin J

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Bioinformatics of Corals: Investigating Heterogeneous Omics Data from Coral Holobionts for Insight into Reef Health and Resilience von Cowen, Lenore J, Putnam, Hollie M

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Detangling PPI networks to uncover functionally meaningful clusters von Hall-Swan, Sarah, Crawford, Jake, Newman, Rebecca, Cowen, Lenore J

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Computing the diffusion state distance on graphs via algebraic multigrid and random projections von Lin, Junyuan, Cowen, Lenore J., Hescott, Benjamin, Hu, Xiaozhe

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Retraction Note: detangling PPI networks to uncover functionally meaningful clusters von Hall-Swan, Sarah, Crawford, Jake, Newman, Rebecca, Cowen, Lenore J

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