The Genome of the Anaerobic Fungus Orpinomyces sp. Strain C1A Reveals the Unique Evolutionary History of a Remarkable Plant Biomass Degrader von YOUSSEF, Noha H, COUGER, M. B, STRUCHTEMEYER, Christopher G, LIGGENSTOFFER, Audra S, PRADE, Rolf A, NAJAR, Fares Z, ATIYEH, Hasan K, WILKINS, Mark R, ELSHAHED, Mostafa S

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Phylogenetic diversity and community structure of anaerobic gut fungi (phylum Neocallimastigomycota) in ruminant and non-ruminant herbivores von Liggenstoffer, Audra S, Youssef, Noha H, Couger, M B, Elshahed, Mostafa S

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Fine-scale bacterial beta diversity within a complex ecosystem (Zodletone Spring, OK, USA): the role of the rare biosphere von Youssef, Noha H, Couger, M B, Elshahed, Mostafa S

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Isolation and characterization of Rhizobium sp. strain YS‐1r that degrades lignin in plant biomass von Jackson, C.A., Couger, M.B., Prabhakaran, M., Ramachandriya, K.D., Canaan, P., Fathepure, B.Z.

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Development of an RNA interference (RNAi) gene knockdown protocol in the anaerobic gut fungus Pecoramyces ruminantium strain C1A von Calkins, Shelby S, Elledge, Nicole C, Mueller, Katherine E, Marek, Stephen M, Couger, M B, Elshahed, Mostafa S, Youssef, Noha H

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Thermal adaptation strategies of the extremophile bacterium Thermus filiformis based on multi-omics analysis von Mandelli, F., Couger, M. B., Paixão, D. A. A., Machado, C. B., Carnielli, C. M., Aricetti, J. A., Polikarpov, I., Prade, R., Caldana, C., Paes Leme, A. F., Mercadante, A. Z., Riaño-Pachón, D. M., Squina, Fabio Marcio

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Horizontal Gene Transfer as an Indispensable Driver for Evolution of Neocallimastigomycota into a Distinct Gut-Dwelling Fungal Lineage von Murphy, Chelsea L, Youssef, Noha H, Hanafy, Radwa A, Couger, M B, Stajich, Jason E, Wang, Yan, Baker, Kristina, Dagar, Sumit S, Griffith, Gareth W, Farag, Ibrahim F, Callaghan, T M, Elshahed, Mostafa S

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Draft genome sequence and detailed analysis of Pantoea eucrina strain Russ and implication for opportunistic pathogenesis von Moghadam, Farzaneh, Couger, MB, Russ, Breeanna, Ramsey, Randi, Hanafy, Radwa A., Budd, Connie, French, Donald P., Hoff, Wouter D., Youssef, Noha

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Transcriptomic analysis of lignocellulosic biomass degradation by the anaerobic fungal isolate Orpinomyces sp. strain C1A von Couger, M B, Youssef, Noha H, Struchtemeyer, Christopher G, Liggenstoffer, Audra S, Elshahed, Mostafa S

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Assessing the global phylum level diversity within the bacterial domain: A review von Youssef, Noha H., Couger, M.B., McCully, Alexandra L., Criado, Andrés Eduardo Guerrero, Elshahed, Mostafa S.

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Survival of the anaerobic fungus Orpinomyces sp. strain C1A after prolonged air exposure von Struchtemeyer, Christopher G., Ranganathan, Abhaya, Couger, M. B., Liggenstoffer, Audra S., Youssef, Noha H., Elshahed, Mostafa S.

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Draft genome sequence of Pseudomonas moraviensis strain Devor implicates metabolic versatility and bioremediation potential von Miller, Neil T., Fuller, Danny, Couger, M.B., Bagazinski, Mark, Boyne, Philip, Devor, Robert C., Hanafy, Radwa A., Budd, Connie, French, Donald P., Hoff, Wouter D., Youssef, Noha

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Draft genome sequence of Microbacterium oleivorans strain Wellendorf implicates heterotrophic versatility and bioremediation potential von Avramov, Anton P., Couger, M.B., Hartley, Emily L., Land, Craig, Wellendorf, Rachel, Hanafy, Radwa A., Budd, Connie, French, Donald P., Hoff, Wouter D., Youssef, Noha

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Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates von Hanafy, Radwa A., Couger, M.B., Baker, Kristina, Murphy, Chelsea, O'Kane, Shannon D., Budd, Connie, French, Donald P., Hoff, Wouter D., Youssef, Noha

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Draft Genome Sequences of Five Pseudomonas aeruginosa Clinical Strains Isolated from Sputum Samples from Cystic Fibrosis Patients von Couger, M B, Wright, Anna, Lutter, Erika I, Youssef, Noha

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Draft genome sequence of Staphylococcus hominis strain Hudgins isolated from human skin implicates metabolic versatility and several virulence determinants von Calkins, Shelby, Couger, M.B., Jackson, Colin, Zandler, Jordan, Hudgins, Garett C., Hanafy, Radwa A., Budd, Connie, French, Donald P., Hoff, Wouter D., Youssef, Noha

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Draft Genome Sequence of the Environmental Isolate Chryseobacterium sp. Hurlbut01 von Couger, M B, Hurlbut, Allison, Murphy, Chelsea L, Budd, Connie, French, Donald P, Hoff, Wouter D, Elshahed, Mostafa S, Youssef, Noha H

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Draft Genome of the Arthrobacter sp. Strain Edens01 von Couger, M B, Hanafy, Radwa A, Edens, Curtis, Budd, Connie, French, Donald P, Hoff, Wouter D, Elshahed, Mostafa S, Youssef, Noha H

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The Draft Genome Sequence of Xanthomonas sp. Strain Mitacek01 Expands the Pangenome of a Genus of Plant Pathogens von Couger, M B, Hanafy, Radwa A, Mitacek, Rachel M, Budd, Connie, French, Donald P, Hoff, Wouter D, Elshahed, Mostafa S, Youssef, Noha H

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Fine-Scale Bacterial Beta Diversity within a Complex Ecosystem von Youssef, Noha H, Couger, M. B, Elshahed, Mostafa S

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