Formic-acid-induced depolymerization of oxidized lignin to aromatics von Rahimi, Alireza, Ulbrich, Arne, Coon, Joshua J., Stahl, Shannon S.

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Phosphoproteomics in the Age of Rapid and Deep Proteome Profiling von Riley, Nicholas M, Coon, Joshua J

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Calorie Restriction and SIRT3 Trigger Global Reprogramming of the Mitochondrial Protein Acetylome von Hebert, Alexander S., Dittenhafer-Reed, Kristin E., Yu, Wei, Bailey, Derek J., Selen, Ebru Selin, Boersma, Melissa D., Carson, Joshua J., Tonelli, Marco, Balloon, Allison J., Higbee, Alan J., Westphall, Michael S., Pagliarini, David J., Prolla, Tomas A., Assadi-Porter, Fariba, Roy, Sushmita, Denu, John M., Coon, Joshua J.

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Capturing site-specific heterogeneity with large-scale N-glycoproteome analysis von Riley, Nicholas M., Hebert, Alexander S., Westphall, Michael S., Coon, Joshua J.

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Collisions or electrons? Protein sequence analysis in the 21st century von Coon, Joshua J

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Parallel Reaction Monitoring for High Resolution and High Mass Accuracy Quantitative, Targeted Proteomics von Peterson, Amelia C., Russell, Jason D., Bailey, Derek J., Westphall, Michael S., Coon, Joshua J.

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A Single Kinase Generates the Majority of the Secreted Phosphoproteome von Tagliabracci, Vincent S., Wiley, Sandra E., Guo, Xiao, Kinch, Lisa N., Durrant, Eric, Wen, Jianzhong, Xiao, Junyu, Cui, Jixin, Nguyen, Kim B., Engel, James L., Coon, Joshua J., Grishin, Nick, Pinna, Lorenzo A., Pagliarini, David J., Dixon, Jack E.

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Mitochondrial Protein Interaction Mapping Identifies Regulators of Respiratory Chain Function von Floyd, Brendan J., Wilkerson, Emily M., Veling, Mike T., Minogue, Catie E., Xia, Chuanwu, Beebe, Emily T., Wrobel, Russell L., Cho, Holly, Kremer, Laura S., Alston, Charlotte L., Gromek, Katarzyna A., Dolan, Brendan K., Ulbrich, Arne, Stefely, Jonathan A., Bohl, Sarah L., Werner, Kelly M., Jochem, Adam, Westphall, Michael S., Rensvold, Jarred W., Taylor, Robert W., Prokisch, Holger, Kim, Jung-Ja P., Coon, Joshua J., Pagliarini, David J.

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Global detection of human variants and isoforms by deep proteome sequencing von Sinitcyn, Pavel, Richards, Alicia L., Weatheritt, Robert J., Brademan, Dain R., Marx, Harald, Shishkova, Evgenia, Meyer, Jesse G., Hebert, Alexander S., Westphall, Michael S., Blencowe, Benjamin J., Cox, Jürgen, Coon, Joshua J.

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Now, More Than Ever, Proteomics Needs Better Chromatography von Shishkova, Evgenia, Hebert, Alexander S., Coon, Joshua J.

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Activated Ion-Electron Transfer Dissociation Enables Comprehensive Top-Down Protein Fragmentation von Riley, Nicholas M, Westphall, Michael S, Coon, Joshua J

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Maximal Oxidative Capacity during Exercise Is Associated with Skeletal Muscle Fuel Selection and Dynamic Changes in Mitochondrial Protein Acetylation von Overmyer, Katherine A., Evans, Charles R., Qi, Nathan R., Minogue, Catherine E., Carson, Joshua J., Chermside-Scabbo, Christopher J., Koch, Lauren G., Britton, Steven L., Pagliarini, David J., Coon, Joshua J., Burant, Charles F.

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Global mapping of CARM1 substrates defines enzyme specificity and substrate recognition von Shishkova, Evgenia, Zeng, Hao, Liu, Fabao, Kwiecien, Nicholas W., Hebert, Alexander S., Coon, Joshua J., Xu, Wei

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LipiDex: An Integrated Software Package for High-Confidence Lipid Identification von Hutchins, Paul D., Russell, Jason D., Coon, Joshua J.

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Three-dimensional structure determination of protein complexes using matrix-landing mass spectrometry von Westphall, Michael S., Lee, Kenneth W., Salome, Austin Z., Lodge, Jean M., Grant, Timothy, Coon, Joshua J.

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Mapping Physiological ADP-Ribosylation Using Activated Ion Electron Transfer Dissociation von Buch-Larsen, Sara C., Hendriks, Ivo A., Lodge, Jean M., Rykær, Martin, Furtwängler, Benjamin, Shishkova, Evgenia, Westphall, Michael S., Coon, Joshua J., Nielsen, Michael L.

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A Quantitative Map of the Liver Mitochondrial Phosphoproteome Reveals Posttranslational Control of Ketogenesis von Grimsrud, Paul A., Carson, Joshua J., Hebert, Alex S., Hubler, Shane L., Niemi, Natalie M., Bailey, Derek J., Jochem, Adam, Stapleton, Donald S., Keller, Mark P., Westphall, Michael S., Yandell, Brian S., Attie, Alan D., Coon, Joshua J., Pagliarini, David J.

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SIRT3 Mediates Multi-Tissue Coupling for Metabolic Fuel Switching von Dittenhafer-Reed, Kristin E., Richards, Alicia L., Fan, Jing, Smallegan, Michael J., Fotuhi Siahpirani, Alireza, Kemmerer, Zachary A., Prolla, Tomas A., Roy, Sushmita, Coon, Joshua J., Denu, John M.

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Metabolic Remodeling during Biofilm Development of Bacillus subtilis von Pisithkul, Tippapha, Schroeder, Jeremy W, Trujillo, Edna A, Yeesin, Ponlkrit, Stevenson, David M, Chaiamarit, Tai, Coon, Joshua J, Wang, Jue D, Amador-Noguez, Daniel

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MS-Helios: a Circos wrapper to visualize multi-omic datasets von Marx, Harald, Coon, Joshua J

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