Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species von Coleman‐Derr, Devin, Desgarennes, Damaris, Fonseca‐Garcia, Citlali, Gross, Stephen, Clingenpeel, Scott, Woyke, Tanja, North, Gretchen, Visel, Axel, Partida‐Martinez, Laila P, Tringe, Susannah G

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Plant immunity suppression via PHR1‐RALF‐FERONIA shapes the root microbiome to alleviate phosphate starvation von Tang, Jing, Wu, Dousheng, Li, Xiaoxu, Wang, Lifeng, Xu, Ling, Zhang, Yi, Xu, Fan, Liu, Hongbin, Xie, Qijun, Dai, Shaojun, Coleman‐Derr, Devin, Zhu, Sirui, Yu, Feng

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Drought Stress and Root-Associated Bacterial Communities von Naylor, Dan, Coleman-Derr, Devin

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The generalizability of water‐deficit on bacterial community composition; Site‐specific water‐availability predicts the bacterial community associated with coast redwood roots... von Willing, Claire E., Pierroz, Grady, Coleman‐Derr, Devin, Dawson, Todd E.

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Successional adaptive strategies revealed by correlating arbuscular mycorrhizal fungal abundance with host plant gene expression von Gao, Cheng, Courty, Pierre‐Emmanuel, Varoquaux, Nelle, Cole, Benjamin, Montoya, Liliam, Xu, Ling, Purdom, Elizabeth, Vogel, John, Hutmacher, Robert B., Dahlberg, Jeffery A., Coleman‐Derr, Devin, Lemaux, Peggy G., Taylor, John W.

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Deposition of histone variant H2A.Z within gene bodies regulates responsive genes von Coleman-Derr, Devin, Zilberman, Daniel

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Loss of Arabidopsis matrix metalloproteinase‐5 affects root development and root bacterial communities during drought stress von Mishra, Laxmi S., Kim, Sung‐Yong, Caddell, Daniel F., Coleman‐Derr, Devin, Funk, Christiane

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Drought and host selection influence bacterial community dynamics in the grass root microbiome von Naylor, Dan, DeGraaf, Stephanie, Purdom, Elizabeth, Coleman-Derr, Devin

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Keep your friends close: Host compartmentalisation of microbial communities facilitates decoupling from effects of habitat fragmentation von Willing, Claire E., Pierroz, Grady, Guzman, Aidee, Anderegg, Leander D. L., Gao, Cheng, Coleman‐Derr, Devin, Taylor, John W., Bruns, Tom D., Dawson, Todd E., Crowther, Thomas

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OrthoVenn: a web server for genome wide comparison and annotation of orthologous clusters across multiple species von Wang, Yi, Coleman-Derr, Devin, Chen, Guoping, Gu, Yong Q

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OrthoVenn2: a web server for whole-genome comparison and annotation of orthologous clusters across multiple species von Xu, Ling, Dong, Zhaobin, Fang, Lu, Luo, Yongjiang, Wei, Zhaoyuan, Guo, Hailong, Zhang, Guoqing, Gu, Yong Q, Coleman-Derr, Devin, Xia, Qingyou, Wang, Yi

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Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes von Akhunov, Eduard D, Akhunova, Alina R, Anderson, Olin D, Anderson, James A, Blake, Nancy, Clegg, Michael T, Coleman-Derr, Devin, Conley, Emily J, Crossman, Curt C, Deal, Karin R, Dubcovsky, Jorge, Gill, Bikram S, Gu, Yong Q, Hadam, Jakub, Heo, Hwayoung, Huo, Naxin, Lazo, Gerard R, Luo, Ming-Cheng, Ma, Yaqin Q, Matthews, David E, McGuire, Patrick E, Morrell, Peter L, Qualset, Calvin O, Renfro, James, Tabanao, Dindo, Talbert, Luther E, Tian, Chao, Toleno, Donna M, Warburton, Marilyn L, You, Frank M, Zhang, Wenjun, Dvorak, Jan

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Plant immunity suppression via PHR1‐RALF‐FERONIA shapes the root microbiome to alleviate phosphate starvation von Tang, Jing, Wu, Dousheng, Li, Xiaoxu, Wang, Lifeng, Xu, Ling, Zhang, Yi, Xu, Fan, Liu, Hongbin, Xie, Qijun, Dai, Shaojun, Coleman‐Derr, Devin, Zhu, Sirui, Yu, Feng

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Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks von Zilberman, Daniel, Henikoff, Steven, Coleman-Derr, Devin, Ballinger, Tracy

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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities von Gao, Cheng, Xu, Ling, Montoya, Liliam, Madera, Mary, Hollingsworth, Joy, Chen, Liang, Purdom, Elizabeth, Singan, Vasanth, Vogel, John, Hutmacher, Robert B., Dahlberg, Jeffery A., Coleman-Derr, Devin, Lemaux, Peggy G., Taylor, John W.

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Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics von Gao, Cheng, Montoya, Liliam, Xu, Ling, Madera, Mary, Hollingsworth, Joy, Purdom, Elizabeth, Singan, Vasanth, Vogel, John, Hutmacher, Robert B., Dahlberg, Jeffery A., Coleman-Derr, Devin, Lemaux, Peggy G., Taylor, John W.

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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative von Wagner, Maggie R, Lundberg, Derek S, Coleman‐Derr, Devin, Tringe, Susannah G, Dangl, Jeffery L, Mitchell‐Olds, Thomas, Klironomos, John

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Evaluating domestication and ploidy effects on the assembly of the wheat bacterial microbiome von Wipf, Heidi M. L., Coleman-Derr, Devin

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Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria von Xu, Ling, Naylor, Dan, Dong, Zhaobin, Simmons, Tuesday, Pierroz, Grady, Hixson, Kim K., Kim, Young-Mo, Zink, ErikaM, Engbrecht, Kristin M., Wang, Yi, Gao, Cheng, DeGraaf, Stephanie, Madera, Mary A., Sievert, Julie A., Hollingsworth, Joy, Birdseye, Devon, Scheller, Henrik V., Hutmacher, Robert, Dahlberg, Jeffery, Jansson, Christer, Taylor, John W., Lemaux, Peggy G., Coleman-Derr, Devin

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Genome-resolved metagenomics reveals role of iron metabolism in drought-induced rhizosphere microbiome dynamics von Xu, Ling, Dong, Zhaobin, Chiniquy, Dawn, Pierroz, Grady, Deng, Siwen, Gao, Cheng, Diamond, Spencer, Simmons, Tuesday, Wipf, Heidi M.-L., Caddell, Daniel, Varoquaux, Nelle, Madera, Mary A., Hutmacher, Robert, Deutschbauer, Adam, Dahlberg, Jeffery A., Guerinot, Mary Lou, Purdom, Elizabeth, Banfield, Jillian F., Taylor, John W., Lemaux, Peggy G., Coleman-Derr, Devin

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