Genome Context Viewer: visual exploration of multiple annotated genomes using microsynteny von Cleary, Alan, Farmer, Andrew

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Genome Context Viewer (GCV) version 2: enhanced visual exploration of multiple annotated genomes von Cleary, Alan M, Farmer, Andrew D

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Ten simple rules for developing visualization tools in genomics von Durant, Eloi, Rouard, Mathieu, Ganko, Eric W, Muller, Cedric, Cleary, Alan M, Farmer, Andrew D, Conte, Matthieu, Sabot, Francois

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Legume information system (LegumeInfo.org): a key component of a set of federated data resources for the legume family von Dash, Sudhansu, Campbell, Jacqueline D, Cannon, Ethalinda K S, Cleary, Alan M, Huang, Wei, Kalberer, Scott R, Karingula, Vijay, Rice, Alex G, Singh, Jugpreet, Umale, Pooja E, Weeks, Nathan T, Wilkey, Andrew P, Farmer, Andrew D, Cannon, Steven B

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Doing Genetic and Genomic Biology Using the Legume Information System and Associated Resources von Redsun, Sven, Hokin, Sam, Cameron, Connor T., Cleary, Alan M., Berendzen, Joel, Dash, Sudhansu, Brown, Anne V., Wilkey, Andrew, Campbell, Jacqueline D., Huang, Wei, Kalberer, Scott R., Weeks, Nathan T., Cannon, Steven B., Farmer, Andrew D.

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The legume information system and associated online genomic resources von Berendzen, Joel, Brown, Anne V., Cameron, Connor T., Campbell, Jacqueline D., Cleary, Alan M., Dash, Sudhansu, Hokin, Samuel, Huang, Wei, Kalberer, Scott R., Nelson, Rex T., Redsun, Sven, Weeks, Nathan T., Wilkey, Andrew, Farmer, Andrew D., Cannon, Steven B.

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Legume information system (LegumeInfo.org): a key component of a set of federated data resources for the legume family von Dash, Sudhansu, Campbell, Jacqueline D., Cannon, Ethalinda K.S., Cleary, Alan M., Huang, Wei, Kalberer, Scott R., Karingula, Vijay, Rice, Alex G., Singh, Jugpreet, Umale, Pooja E., Weeks, Nathan T., Wilkey, Andrew P., Farmer, Andrew D., Cannon, Steven B.

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Araport Lives: An Updated Framework for Arabidopsis Bioinformatics von Pasha, Asher, Subramaniam, Shabari, Cleary, Alan, Chen, Xingguo, Berardini, Tanya, Farmer, Andrew, Town, Christopher, Provart, Nicholas

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Exploring Frequented Regions in Pan-Genomic Graphs von Cleary, Alan, Ramaraj, Thiruvarangan, Kahanda, Indika, Mudge, Joann, Mumey, Brendan

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Araport Lives: An Updated Framework for Arabidopsis Bioinformatics von Pasha, Asher, Subramaniam, Shabari, Cleary, Alan, Chen, Xingguo, Berardini, Tanya, Farmer, Andrew, Town, Christopher, Provart, Nicholas

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The future of legume genetic data resources: Challenges, opportunities, and priorities von Bauchet, Guillaume J., Bett, Kirstin E., Cameron, Connor T., Campbell, Jacqueline D., Cannon, Ethalinda K.S., Cannon, Steven B., Carlson, Joseph W., Chan, Agnes, Cleary, Alan, Close, Timothy J., Cook, Douglas R., Cooksey, Amanda M., Coyne, Clarice, Dash, Sudhansu, Dickstein, Rebecca, Farmer, Andrew D., Fernández‐Baca, David, Hokin, Samuel, Jones, Elizabeth S., Kang, Yun, Monteros, Maria J., Muñoz‐Amatriaín, María, Mysore, Kirankumar S., Pislariu, Catalina I., Richards, Chris, Shi, Ainong, Town, Christopher D., Udvardi, Michael, Wettberg, Eric Bishop, Young, Nevin D., Zhao, Patrick X.

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FRBRizing an E-Library : Migrating from Dublin Core to FRBR and MODS von Jeremy Nelson, Alan Cleary

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A strategy for building and using a human reference pangenome [version 2; peer review: 2 approved] von Llamas, Bastien, Narzisi, Giuseppe, Schneider, Valerie, Audano, Peter A, Biederstedt, Evan, Blauvelt, Lon, Bradbury, Peter, Chang, Xian, Chin, Chen-Shan, Fungtammasan, Arkarachai, Clarke, Wayne E, Cleary, Alan, Ebler, Jana, Eizenga, Jordan, Sibbesen, Jonas A, Markello, Charles J, Garrison, Erik, Garg, Shilpa, Hickey, Glenn, Lazo, Gerard R, Lin, Michael F, Mahmoud, Medhat, Marschall, Tobias, Minkin, Ilia, Monlong, Jean, Musunuri, Rajeeva L, Sagayaradj, Sagayamary, Novak, Adam M, Rautiainen, Mikko, Regier, Allison, Sedlazeck, Fritz J, Siren, Jouni, Souilmi, Yassine, Wagner, Justin, Wrightsman, Travis, Yokoyama, Toshiyuki T, Zeng, Qiandong, Zook, Justin M, Paten, Benedict, Busby, Ben

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A strategy for building and using a human reference pangenome [version 1; peer review: 1 approved, 1 approved with reservations] von Llamas, Bastien, Narzisi, Giuseppe, Schneider, Valerie, Audano, Peter A, Biederstedt, Evan, Blauvelt, Lon, Bradbury, Peter, Chang, Xian, Chin, Chen-Shan, Fungtammasan, Arkarachai, Clarke, Wayne E, Cleary, Alan, Ebler, Jana, Eizenga, Jordan, Sibbesen, Jonas A, Markello, Charles J, Garrison, Erik, Garg, Shilpa, Hickey, Glenn, Lazo, Gerard R, Lin, Michael F, Mahmoud, Medhat, Marschall, Tobias, Minkin, Ilia, Monlong, Jean, Musunuri, Rajeeva L, Sagayaradj, Sagayamary, Novak, Adam M, Rautiainen, Mikko, Regier, Allison, Sedlazeck, Fritz J, Siren, Jouni, Souilmi, Yassine, Wagner, Justin, Wrightsman, Travis, Yokoyama, Toshiyuki T, Zeng, Qiandong, Zook, Justin M, Paten, Benedict, Busby, Ben

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Revisiting the Folklore Algorithm for Random Access to Grammar-Compressed Strings von Cleary, Alan M, Winjum, Joseph, Dood, Jordan, Inenaga, Shunsuke

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The CDAWG Index and Pattern Matching on Grammar-Compressed Strings von Cleary, Alan M, Winjum, Joseph, Dood, Jordan, Inenaga, Shunsuke

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The CDAWG Index and Pattern Matching on Grammar-Compressed Strings von Cleary, Alan M, Winjum, Joseph, Jordan Dood, Inenaga, Shunsuke

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Revisiting the Folklore Algorithm for Random Access to Grammar-Compressed Strings von Cleary, Alan M, Winjum, Joseph, Jordan Dood, Inenaga, Shunsuke

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A survey of recent decisions in pleading and water law, by Leslie Alan Cleary von Cleary, Leslie Alan

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All we have to do now is charm consumers von Cleary, Alan

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