TopoLink: evaluation of structural models using chemical crosslinking distance constraints von Ferrari, Allan J R, Clasen, Milan A, Kurt, Louise, Carvalho, Paulo C, Gozzo, Fabio C, Martínez, Leandro

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Simple, efficient and thorough shotgun proteomic analysis with PatternLab V von Santos, Marlon D. M., Lima, Diogo B., Fischer, Juliana S. G., Clasen, Milan A., Kurt, Louise U., Camillo-Andrade, Amanda Caroline, Monteiro, Leandro C., de Aquino, Priscila F., Neves-Ferreira, Ana G. C., Valente, Richard H., Trugilho, Monique R. O., Brunoro, Giselle V. F., Souza, Tatiana A. C. B., Santos, Renata M., Batista, Michel, Gozzo, Fabio C., Durán, Rosario, Yates, John R., Barbosa, Valmir C., Carvalho, Paulo C.

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Increasing confidence in proteomic spectral deconvolution through mass defect von Clasen, Milan A, Kurt, Louise U, Santos, Marlon D M, Lima, Diogo B, Liu, Fan, Gozzo, Fabio C, Barbosa, Valmir C, Carvalho, Paulo C

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Characterizing protein conformers by cross-linking mass spectrometry and pattern recognition von Kurt, Louise U, Clasen, Milan A, Santos, Marlon D M, Lyra, Eduardo S B, Santos, Luana O, Ramos, Carlos H I, Lima, Diogo B, Gozzo, Fabio C, Carvalho, Paulo C

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Top-Down Garbage Collector: a tool for selecting high-quality top-down proteomics mass spectra von Lima, Diogo B, Silva, André R F, Dupré, Mathieu, Santos, Marlon D M, Clasen, Milan A, Kurt, Louise U, Aquino, Priscila F, Barbosa, Valmir C, Carvalho, Paulo C, Chamot-Rooke, Julia

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RawVegetable – A data assessment tool for proteomics and cross-linking mass spectrometry experiments von Kurt, Louise U., Clasen, Milan A., Santos, Marlon D.M., Souza, Tatiana A.C.B., Andreassa, Emanuella C., Lyra, Eduardo B., Lima, Diogo B., Gozzo, Fabio C., Carvalho, Paulo C.

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Mixed-Data Acquisition: Next-Generation Quantitative Proteomics Data Acquisition von Santos, Marlon D.M., Camillo-Andrade, Amanda Caroline, Kurt, Louise U., Clasen, Milan A., Lyra, Eduardo, Gozzo, Fabio C., Batista, Michel, Valente, Richard H., Brunoro, Giselle V.F., Barbosa, Valmir C., Fischer, Juliana S.G., Carvalho, Paulo C.

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A quantitation module for isotope-labeled peptides integrated into PatternLab for proteomics von Santos, Marlon D.M., Lima, Diogo B., Silva, André R.F., Kurt, Louise U., Clasen, Milan A., Pinto, Antônio F.M., Moresco, James J., Yates, John R., Aquino, Priscila, Barbosa, Valmir C., Fischer, Juliana S.G., Carvalho, Paulo C.

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Advantages and limitations for users of double pit pour-flush latrines: a qualitative study in rural Bangladesh von Hussain, Faruqe, Clasen, Thomas, Akter, Shahinoor, Bawel, Victoria, Luby, Stephen P, Leontsini, Elli, Unicomb, Leanne, Barua, Milan Kanti, Thomas, Brittany, Winch, Peter J

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Proteome-scale recombinant standards and a robust high-speed search engine to advance cross-linking MS-based interactomics von Clasen, Milan Avila, Ruwolt, Max, Wang, Cong, Ruta, Julia, Bogdanow, Boris, Kurt, Louise U., Zhang, Zehong, Wang, Shuai, Gozzo, Fabio C., Chen, Tao, Carvalho, Paulo C., Lima, Diogo Borges, Liu, Fan

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RawVegetable 2.0: Refining XL-MS Data Acquisition through Enhanced Quality Control von Kurt, Louise Ulrich, Clasen, Milan Avila, Biembengut, Ísis Venturi, Ruwolt, Max, Liu, Fan, Gozzo, Fabio César, Lima, Diogo Borges, Carvalho, Paulo Costa

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A fingerprint of plasma proteome alteration after local tissue damage induced by Bothrops leucurus snake venom in mice von Cavalcante, Joeliton dos Santos, de Almeida, Cayo Antônio Soares, Clasen, Milan Avila, da Silva, Emerson Lucena, de Barros, Luciana Curtolo, Marinho, Aline Diogo, Rossini, Bruno Cesar, Marino, Celso Luís, Carvalho, Paulo Costa, Jorge, Roberta Jeane Bezerra, dos Santos, Lucilene Delazari

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Advantages and limitations for users of double pit pour-flush latrines: a qualitative study in rural Bangladesh von Hussain, Faruqe, Clasen, Thomas, Akter, Shahinoor, Bawel, Victoria, Luby, Stephen P, Leontsini, Elli, Unicomb, Leanne, Barua, Milan Kanti, Thomas, Brittany, Winch, Peter J

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Comparing intestinal versus diffuse gastric cancer using a PEFF-oriented proteomic pipeline von Wippel, Helisa Helena, Santos, Marlon Dias Mariano, Clasen, Milan Avila, Kurt, Louise Ulrich, Nogueira, Fabio Cesar Sousa, Carvalho, Carlos Eduardo, McCormick, Thaís Messias, Neto, Guilherme Pinto Bravo, Alves, Lysangela Ronalte, da Gloria da Costa Carvalho, Maria, Carvalho, Paulo Costa, Fischer, Juliana de Saldanha da Gama

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