Consensus Scoring:  A Method for Obtaining Improved Hit Rates from Docking Databases of Three-Dimensional Structures into Proteins von Charifson, Paul S, Corkery, Joseph J, Murcko, Mark A, Walters, W. Patrick

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Are Free Energy Calculations Useful in Practice? A Comparison with Rapid Scoring Functions for the p38 MAP Kinase Protein System von Pearlman, David A, Charifson, Paul S

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Improved Scoring of Ligand−Protein Interactions Using OWFEG Free Energy Grids von Pearlman, David A, Charifson, Paul S

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Crystal Structures of Escherichia coli Topoisomerase IV ParE Subunit (24 and 43 Kilodaltons): a Single Residue Dictates Differences in Novobiocin Potency against Topoisomerase IV a... von BELLON, Steven, PARSONS, Jonathan D, YUNYI WEI, HAYAKAWA, Koto, SWENSON, Lora L, CHARIFSON, Paul S, LIPPKE, Judith A, ALDAPE, Robert, GROSS, Christian H

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Active-Site Residues of Escherichia coli DNA Gyrase Required in Coupling ATP Hydrolysis to DNA Supercoiling and Amino Acid Substitutions Leading to Novobiocin Resistance von GROSS, Christian H, PARSONS, Jonathan D, RAYBUCK, Scott A, GROSSMAN, Trudy H, CHARIFSON, Paul S, BELLON, Steven, JERNEE, James, DWYER, Maureen, CHAMBERS, Stephen P, MARKLAND, William, BOTFIELD, Martyn

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Simulation of the solution structure of the H-ras p21-GTP complex von Foley, C. K., Pedersen, L. G., Charifson, P. S., Darden, T. A., Wittinghofer, A., Pai, E. F., Anderson, M. W.

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Filtering databases and chemical libraries von Charifson, Paul S, Walters, W Patrick

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Conformational Analysis of Drug-Like Molecules Bound to Proteins:  An Extensive Study of Ligand Reorganization upon Binding von Perola, Emanuele, Charifson, Paul S

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The formation of a covalent complex between a dipeptide ligand and the src SH2 domain von Alligood, Krystal J., Charifson, Paul S., Crosby, Renae, Consler, Thomas G., Feldman, Paul L., Gampe, Robert T., Gilmer, Tona M., Jordan, Steven R., Milstead, Mark W., Mohr, Christopher, Peel, Michael R., Rocque, Warren, Rodriguez, Marc, Rusnak, David W., Shewchuk, Lisa M., Sternbach, Daniel D.

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A detailed comparison of current docking and scoring methods on systems of pharmaceutical relevance von Perola, Emanuele, Walters, W. Patrick, Charifson, Paul S.

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Expression and characterization of human factor IX. Factor IXthr-397 and factor IXval-397 von HAMAGUCHI, N, CHARIFSON, P. S, PEDERSEN, L. G, BRAYER, G. D, SMITH, K. J, STAFFORD, D. W

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3-[4-(1,2-Diphenylbut-1-enyl)phenyl]acrylic Acid: A Non-Steroidal Estrogen with Functional Selectivity for Bone over Uterus in Rats von Willson, Timothy M, Henke, Brad R, Momtahen, Tanya M, Charifson, Paul S, Batchelor, Kenneth W, Lubahn, Dennis B, Moore, Linda B, Oliver, Beverly B, Sauls, Howard R, Triantafillou, James A, Wolfe, Steven G, Baer, Philip G

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Synthesis and Molecular Modeling of 1-Phenyl-1,2,3,4-tetrahydroisoquinolines and Related 5,6,8,9-Tetrahydro-13bH-dibenzo[a,h]quinolizines as D1 Dopamine Antagonists von Minor, Deborah L, Wyrick, Steven D, Charifson, Paul S, Watts, Val J, Nichols, David E, Mailman, Richard B

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Computer-Assisted Molecular Modeling: Indispensable Tools for Molecular Pharmacology von Bowen, J. Phillip, Charifson, Paul S., Fox, Peter C., Kontoyianni, Maria, Miller, Aaron B., Schnur, Dora, Stewart, Eugene L., Van Dyke, Christopher

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Peptide ligands of pp60(c-src) SH2 domains: a thermodynamic and structural study von Charifson, P S, Shewchuk, L M, Rocque, W, Hummel, C W, Jordan, S R, Mohr, C, Pacofsky, G J, Peel, M R, Rodriguez, M, Sternbach, D D, Consler, T G

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Role of Glutamine-61 in the Hydrolysis of GTP by p21H-ras: An Experimental and Theoretical Study von Frech, M, Darden, T. A, Pedersen, L. G, Foley, C. K, Charifson, P. S, Anderson, M. W, Wittinghofer, A

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Solution Conformations of the γ-Carboxyglutamic Acid Domain of Bovine Prothrombin Fragment 1, Residues 1-65 von Charifson, Paul S., Darden, Tom, Tulinsky, Alexander, Hughey, Joseph L., Hiskey, Richard G., Pedersen, Lee G.

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Synthesis and characterization of 1,1,4,4-butanetetracarboxylic acid : a di-γ-carboxyglutamic acid (GlaGla) analogue von CABANISS, S. E, PUGH, K. C, CHARIFSON, P. S, PEDERSEN, L. G, HISKEY, R. G

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In Vitro Characterization of the Antibacterial Spectrum of Novel Bacterial Type II Topoisomerase Inhibitors of the Aminobenzimidazole Class von MANI, Nagraj, GROSS, Christian H, GROSSMAN, Trudy H, PARSONS, Jonathan D, HANZELKA, Brian, MÜH, Ute, MULLIN, Steve, YUSHENG LIAO, GRILLOT, Anne-Laure, STAMOS, Dean, CHARIFSON, Paul S

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Construction and molecular modeling of phospholipid surfaces von Charifson, Paul S., Hiskey, Richard G., Pedersen, Lee G.

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