Processing strategies and software solutions for data-independent acquisition in mass spectrometry von Bilbao, Aivett, Varesio, Emmanuel, Luban, Jeremy, Strambio-De-Castillia, Caterina, Hopfgartner, Gérard, Müller, Markus, Lisacek, Frédérique

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Evidence for biphasic uncoating during HIV-1 infection from a novel imaging assay von Xu, Hongzhan, Franks, Tamera, Gibson, Gregory, Huber, Kelly, Rahm, Nadia, Strambio De Castillia, Caterina, Luban, Jeremy, Aiken, Christopher, Watkins, Simon, Sluis-Cremer, Nicolas, Ambrose, Zandrea

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MDEmic: a metadata annotation tool to facilitate management of FAIR image data in the bioimaging community von Kunis, Susanne, Hänsch, Sebastian, Schmidt, Christian, Wong, Frances, Strambio-De-Castillia, Caterina, Weidtkamp-Peters, Stefanie

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The Use of Variable Q1 Isolation Windows Improves Selectivity in LC–SWATH–MS Acquisition von Zhang, Ying, Bilbao, Aivett, Bruderer, Tobias, Luban, Jeremy, Strambio-De-Castillia, Caterina, Lisacek, Frédérique, Hopfgartner, Gérard, Varesio, Emmanuel

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QUAREP-LiMi: a community endeavor to advance quality assessment and reproducibility in light microscopy von Boehm, Ulrike, Nelson, Glyn, Brown, Claire M., Bagley, Steve, Bajcsy, Peter, Bischof, Johanna, Dauphin, Aurelien, Dobbie, Ian M., Eriksson, John E., Faklaris, Orestis, Fernandez-Rodriguez, Julia, Ferrand, Alexia, Gelman, Laurent, Gheisari, Ali, Hartmann, Hella, Kukat, Christian, Laude, Alex, Mitkovski, Miso, Munck, Sebastian, North, Alison J., Rasse, Tobias M., Resch-Genger, Ute, Schuetz, Lucas C., Seitz, Arne, Strambio-De-Castillia, Caterina, Swedlow, Jason R., Nitschke, Roland

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The DHODH inhibitor PTC299 arrests SARS-CoV-2 replication and suppresses induction of inflammatory cytokines von Luban, Jeremy, Sattler, Rachel A., Mühlberger, Elke, Graci, Jason D., Cao, Liangxian, Weetall, Marla, Trotta, Christopher, Colacino, Joseph M., Bavari, Sina, Strambio-De-Castillia, Caterina, Suder, Ellen L., Wang, Yetao, Soloveva, Veronica, Cintron-Lue, Katherine, Naryshkin, Nikolai A., Pykett, Mark, Welch, Ellen M., O’Keefe, Kylie, Kong, Ronald, Goodwin, Elizabeth, Jacobson, Allan, Paessler, Slobodan, Peltz, Stuart W.

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Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model von Hammer, Mathias, Huisman, Maximiliaan, Rigano, Alessandro, Boehm, Ulrike, Chambers, James J., Gaudreault, Nathalie, North, Alison J., Pimentel, Jaime A., Sudar, Damir, Bajcsy, Peter, Brown, Claire M., Corbett, Alexander D., Faklaris, Orestis, Lacoste, Judith, Laude, Alex, Nelson, Glyn, Nitschke, Roland, Farzam, Farzin, Smith, Carlas S., Grunwald, David, Strambio-De-Castillia, Caterina

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MethodsJ2: a software tool to capture metadata and generate comprehensive microscopy methods text von Ryan, Joel, Pengo, Thomas, Rigano, Alex, Llopis, Paula Montero, Itano, Michelle S., Cameron, Lisa A., Marqués, Guillermo, Strambio-De-Castillia, Caterina, Sanders, Mark A., Brown, Claire M.

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SnapFISH: a computational pipeline to identify chromatin loops from multiplexed DNA FISH data von Lee, Lindsay, Yu, Hongyu, Jia, Bojing Blair, Jussila, Adam, Zhu, Chenxu, Chen, Jiawen, Xie, Liangqi, Hafner, Antonina, Mishra, Shreya, Wang, Duan Dennis, Strambio-De-Castillia, Caterina, Boettiger, Alistair, Ren, Bing, Li, Yun, Hu, Ming

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The nuclear basket proteins Mlp1p and Mlp2p are part of a dynamic interactome including Esc1p and the proteasome von Niepel, Mario, Molloy, Kelly R, Williams, Rosemary, Farr, Julia C, Meinema, Anne C, Vecchietti, Nicholas, Cristea, Ileana M, Chait, Brian T, Rout, Michael P, Strambio-De-Castillia, Caterina

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Micro-Meta App: an interactive tool for collecting microscopy metadata based on community specifications von Rigano, Alessandro, Ehmsen, Shannon, Öztürk, Serkan Utku, Ryan, Joel, Balashov, Alexander, Hammer, Mathias, Kirli, Koray, Boehm, Ulrike, Brown, Claire M., Bellve, Karl, Chambers, James J., Cosolo, Andrea, Coleman, Robert A., Faklaris, Orestis, Fogarty, Kevin E., Guilbert, Thomas, Hamacher, Anna B., Itano, Michelle S., Keeley, Daniel P., Kunis, Susanne, Lacoste, Judith, Laude, Alex, Ma, Willa Y., Marcello, Marco, Montero-Llopis, Paula, Nelson, Glyn, Nitschke, Roland, Pimentel, Jaime A., Weidtkamp-Peters, Stefanie, Park, Peter J., Alver, Burak H., Grunwald, David, Strambio-De-Castillia, Caterina

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Author Correction: Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model von Hammer, Mathias, Huisman, Maximiliaan, Rigano, Alessandro, Boehm, Ulrike, Chambers, James J., Gaudreault, Nathalie, North, Alison J., Pimentel, Jaime A., Sudar, Damir, Bajcsy, Peter, Brown, Claire M., Corbett, Alexander D., Faklaris, Orestis, Lacoste, Judith, Laude, Alex, Nelson, Glyn, Nitschke, Roland, Farzam, Farzin, Smith, Carlas S., Grunwald, David, Strambio-De-Castillia, Caterina

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Author Correction: QUAREP-LiMi: a community endeavor to advance quality assessment and reproducibility in light microscopy von Boehm, Ulrike, Nelson, Glyn, Brown, Claire M., Bagley, Steve, Bajcsy, Peter, Bischof, Johanna, Dauphin, Aurelien, Dobbie, Ian M., Eriksson, John E., Faklaris, Orestis, Fernandez-Rodriguez, Julia, Ferrand, Alexia, Gelman, Laurent, Gheisari, Ali, Hartmann, Hella, Kukat, Christian, Laude, Alex, Mitkovski, Miso, Munck, Sebastian, North, Alison J., Rasse, Tobias M., Resch-Genger, Ute, Schuetz, Lucas C., Seitz, Arne, Strambio-De-Castillia, Caterina, Swedlow, Jason R., Nitschke, Roland

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An Invariant Surface Patch on the TRIM5α PRYSPRY Domain Is Required for Retroviral Restriction but Dispensable for Capsid Binding von SEBASTIAN, Sarah, GRÜTTER, Christian, STRAMBIO DE CASTILLIA, Caterina, PERTEL, Thomas, OLIVARI, Silvia, GRÜTTER, Markus G, LUBAN, Jeremy

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Potent inhibition of HIV-1 by TRIM5-cyclophilin fusion proteins engineered from human components von Neagu, Martha R, Ziegler, Patrick, Pertel, Thomas, Strambio-De-Castillia, Caterina, Grütter, Christian, Martinetti, Gladys, Mazzucchelli, Luca, Grütter, Markus, Manz, Markus G, Luban, Jeremy

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Author Correction: Micro-Meta App: an interactive tool for collecting microscopy metadata based on community specifications von Rigano, Alessandro, Ehmsen, Shannon, Öztürk, Serkan Utku, Ryan, Joel, Balashov, Alexander, Hammer, Mathias, Kirli, Koray, Boehm, Ulrike, Brown, Claire M., Bellve, Karl, Chambers, James J., Cosolo, Andrea, Coleman, Robert A., Faklaris, Orestis, Fogarty, Kevin E., Guilbert, Thomas, Hamacher, Anna B., Itano, Michelle S., Keeley, Daniel P., Kunis, Susanne, Lacoste, Judith, Laude, Alex, Ma, Willa Y., Marcello, Marco, Montero-Llopis, Paula, Nelson, Glyn, Nitschke, Roland, Pimentel, Jaime A., Weidtkamp-Peters, Stefanie, Park, Peter J., Alver, Burak H., Grunwald, David, Strambio-De-Castillia, Caterina

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TRIM5 is an innate immune sensor for the retrovirus capsid lattice von Pertel, Thomas, Hausmann, Stéphane, Morger, Damien, Züger, Sara, Guerra, Jessica, Lascano, Josefina, Reinhard, Christian, Santoni, Federico A., Uchil, Pradeep D., Chatel, Laurence, Bisiaux, Aurélie, Albert, Matthew L., Strambio-De-Castillia, Caterina, Mothes, Walther, Pizzato, Massimo, Grütter, Markus G., Luban, Jeremy

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Optimization by infusion of multiple reaction monitoring transitions for sensitive quantification of peptides by liquid chromatography/mass spectrometry von Alghanem, Bandar, Nikitin, Frédéric, Stricker, Thomas, Duchoslav, Eva, Luban, Jeremy, Strambio‐De‐Castillia, Caterina, Muller, Markus, Lisacek, Frédérique, Varesio, Emmanuel, Hopfgartner, Gérard

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nuclear pore complex-associated protein, Mlp2p, binds to the yeast spindle pole body and promotes its efficient assembly von Niepel, Mario, Strambio-de-Castillia, Caterina, Fasolo, Joseph, Chait, Brian T, Rout, Michael P

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Microscopy reproducibility for the real world: building interactive tools to document light microscopy experiments based on community specification von Strambio De Castillia, Caterina

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