Computational immunology meets bioinformatics: the use of prediction tools for molecular binding in the simulation of the immune system von Rapin, Nicolas, Lund, Ole, Bernaschi, Massimo, Castiglione, Filippo

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Emulating complex simulations by machine learning methods von Stolfi, Paola, Castiglione, Filippo

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A candidate multi-epitope vaccine against SARS-CoV-2 von Kar, Tamalika, Narsaria, Utkarsh, Basak, Srijita, Deb, Debashrito, Castiglione, Filippo, Mueller, David M., Srivastava, Anurag P.

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Gene Regulatory Network Modeling of Macrophage Differentiation Corroborates the Continuum Hypothesis of Polarization States von Palma, Alessandro, Jarrah, Abdul Salam, Tieri, Paolo, Cesareni, Gianni, Castiglione, Filippo

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Agent-based modeling of morphogenetic systems: Advantages and challenges von Glen, Chad M, Kemp, Melissa L, Voit, Eberhard O

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From Infection to Immunity: Understanding the Response to SARS-CoV2 Through In-Silico Modeling von Castiglione, Filippo, Deb, Debashrito, Srivastava, Anurag P., Lio, Pietro, Liso, Arcangelo

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In silico designing of vaccine candidate against Clostridium difficile von Basak, Srijita, Deb, Debashrito, Narsaria, Utkarsh, Kar, Tamalika, Castiglione, Filippo, Sanyal, Indraneel, Bade, Pratap D., Srivastava, Anurag P.

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Potential predictors of type-2 diabetes risk: machine learning, synthetic data and wearable health devices von Stolfi, Paola, Valentini, Ilaria, Palumbo, Maria Concetta, Tieri, Paolo, Grignolio, Andrea, Castiglione, Filippo

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Editorial: Quantification of immunological memory von Di Rosa, Francesca, Castiglione, Filippo, Hershberg, Uri, Prisco, Antonella

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Game of neutrophils: modeling the balance between apoptosis and necrosis von Presbitero, Alva, Mancini, Emiliano, Castiglione, Filippo, Krzhizhanovskaya, Valeria V, Quax, Rick

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Mathematical modeling of the synergistic interplay of radiotherapy and immunotherapy in anti-cancer treatments von Castorina, Paolo, Castiglione, Filippo, Ferini, Gianluca, Forte, Stefano, Martorana, Emanuele, Giuffrida, Dario

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Personalizing physical exercise in a computational model of fuel homeostasis von Palumbo, Maria Concetta, Morettini, Micaela, Tieri, Paolo, Diele, Fasma, Sacchetti, Massimo, Castiglione, Filippo

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In-silico evaluation of adenoviral COVID-19 vaccination protocols: Assessment of immunological memory up to 6 months after the third dose von Stolfi, Paola, Castiglione, Filippo, Mastrostefano, Enrico, Di Biase, Immacolata, Di Biase, Sebastiano, Palmieri, Gianna, Prisco, Antonella

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Personal response to immune checkpoint inhibitors of patients with advanced melanoma explained by a computational model of cellular immunity, tumor growth, and drug von Perlstein, D, Shlagman, O, Kogan, Y, Halevi-Tobias, K, Yakobson, A, Lazarev, I, Agur, Z

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An agent-based multi-level model to study the spread of gonorrhea in different and interacting risk groups von Stolfi, Paola, Vergni, Davide, Castiglione, Filippo

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A system model of the effects of exercise on plasma Interleukin-6 dynamics in healthy individuals: Role of skeletal muscle and adipose tissue von Morettini, Micaela, Palumbo, Maria Concetta, Sacchetti, Massimo, Castiglione, Filippo, Mazzà, Claudia

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Loss of connectivity in cancer co-expression networks von Anglani, Roberto, Creanza, Teresa M, Liuzzi, Vania C, Piepoli, Ada, Panza, Anna, Andriulli, Angelo, Ancona, Nicola

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Computer Modeling of Clonal Dominance: Memory-Anti-Naïve and Its Curbing by Attrition von Castiglione, Filippo, Ghersi, Dario, Celada, Franco

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Agent-Based Modeling of the Immune System : NetLogo, a Promising Framework von Chiacchio, Ferdinando, Pennisi, Marzio, Russo, Giulia, Motta, Santo, Pappalardo, Francesco

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Modeling Biology Spanning Different Scales : An Open Challenge von Castiglione, Filippo, Pappalardo, Francesco, Bianca, Carlo, Russo, Giulia, Motta, Santo

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