Functional roles of alternative splicing factors in human disease von Cieply, Benjamin, Carstens, Russ P.

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Complex changes in alternative pre-mRNA splicing play a central role in the epithelial-to-mesenchymal transition (EMT) von Warzecha, Claude C, Carstens, Russ P

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ESRP1 and ESRP2 Are Epithelial Cell-Type-Specific Regulators of FGFR2 Splicing von Warzecha, Claude C., Sato, Trey K., Nabet, Behnam, Hogenesch, John B., Carstens, Russ P.

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Determination of a Comprehensive Alternative Splicing Regulatory Network and Combinatorial Regulation by Key Factors during the Epithelial-to-Mesenchymal Transition von Yang, Yueqin, Park, Juw Won, Bebee, Thomas W., Warzecha, Claude C., Guo, Yang, Shang, Xuequn, Xing, Yi, Carstens, Russ P.

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MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data von Shen, Shihao, Park, Juw Won, Huang, Jian, Dittmar, Kimberly A, Lu, Zhi-xiang, Zhou, Qing, Carstens, Russ P, Xing, Yi

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Alternative splicing rewires Hippo signaling pathway in hepatocytes to promote liver regeneration von Bangru, Sushant, Arif, Waqar, Seimetz, Joseph, Bhate, Amruta, Chen, Jackie, Rashan, Edrees H., Carstens, Russ P., Anakk, Sayeepriyadarshini, Kalsotra, Auinash

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Deep-learning augmented RNA-seq analysis of transcript splicing von Zhang, Zijun, Pan, Zhicheng, Ying, Yi, Xie, Zhijie, Adhikari, Samir, Phillips, John, Carstens, Russ P., Black, Douglas L., Wu, Yingnian, Xing, Yi

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Multiphasic and Dynamic Changes in Alternative Splicing during Induction of Pluripotency Are Coordinated by Numerous RNA-Binding Proteins von Cieply, Benjamin, Park, Juw Won, Nakauka-Ddamba, Angela, Bebee, Thomas W., Guo, Yang, Shang, Xuequn, Lengner, Christopher J., Xing, Yi, Carstens, Russ P.

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Alternative splicing regulates distinct subcellular localization of Epithelial splicing regulatory protein 1 (Esrp1) isoforms von Yang, Yueqin, Carstens, Russ P.

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The Musashi 1 Controls the Splicing of Photoreceptor-Specific Exons in the Vertebrate Retina von Murphy, Daniel, Cieply, Benjamin, Carstens, Russ, Ramamurthy, Visvanathan, Stoilov, Peter

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Exo70 Isoform Switching upon Epithelial-Mesenchymal Transition Mediates Cancer Cell Invasion von Lu, Hezhe, Liu, Jianglan, Liu, Shujing, Zeng, Jingwen, Ding, Deqiang, Carstens, Russ P., Cong, Yusheng, Xu, Xiaowei, Guo, Wei

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The germ cell-specific RNA binding protein RBM46 is essential for spermatogonial differentiation in mice von Peart, Natoya J, Johnson, Taylor A, Lee, Sungkyoung, Sears, Matthew J, Yang, Fang, Quesnel-Vallières, Mathieu, Feng, Huijuan, Recinos, Yocelyn, Barash, Yoseph, Zhang, Chaolin, Hermann, Brian P, Wang, P Jeremy, Geyer, Christopher B, Carstens, Russ P

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A compendium of RNA-binding motifs for decoding gene regulation von Ray, Debashish, Kazan, Hilal, Cook, Kate B., Weirauch, Matthew T., Najafabadi, Hamed S., Li, Xiao, Gueroussov, Serge, Albu, Mihai, Zheng, Hong, Yang, Ally, Na, Hong, Irimia, Manuel, Matzat, Leah H., Dale, Ryan K., Smith, Sarah A., Yarosh, Christopher A., Kelly, Seth M., Nabet, Behnam, Mecenas, Desirea, Li, Weimin, Laishram, Rakesh S., Qiao, Mei, Lipshitz, Howard D., Piano, Fabio, Corbett, Anita H., Carstens, Russ P., Frey, Brendan J., Anderson, Richard A., Lynch, Kristen W., Penalva, Luiz O. F., Lei, Elissa P., Fraser, Andrew G., Blencowe, Benjamin J., Morris, Quaid D., Hughes, Timothy R.

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An ESRP-regulated splicing programme is abrogated during the epithelial-mesenchymal transition von Warzecha, Claude C, Jiang, Peng, Amirikian, Karine, Dittmar, Kimberly A, Lu, Hezhe, Shen, Shihao, Guo, Wei, Xing, Yi, Carstens, Russ P

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The splicing regulators Esrp1 and Esrp2 direct an epithelial splicing program essential for mammalian development von Bebee, Thomas W, Park, Juw Won, Sheridan, Katherine I, Warzecha, Claude C, Cieply, Benjamin W, Rohacek, Alex M, Xing, Yi, Carstens, Russ P

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Splicing program of human MENA produces a previously undescribed isoform associated with invasive, mesenchymal-like breast tumors von Di Modugno, Francesca, Iapicca, Pierluigi, Boudreau, Aaron, Mottolese, Marcella, Terrenato, Irene, Perracchio, Letizia, Carstens, Russ P, Santoni, Angela, Bissell, Mina J, Nisticò, Paola

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Cleft lip and cleft palate in Esrp1 knockout mice is associated with alterations in epithelial-mesenchymal crosstalk von Lee, SungKyoung, Sears, Matthew J, Zhang, Zijun, Li, Hong, Salhab, Imad, Krebs, Philippe, Xing, Yi, Nah, Hyun-Duck, Williams, Trevor, Carstens, Russ P

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The epithelial splicing factors ESRP1 and ESRP2 positively and negatively regulate diverse types of alternative splicing events von Warzecha, Claude C., Shen, Shihao, Xing, Yi, Carstens, Russ P.

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Networking in an Alternative Splicing World von Carstens, Russ P.

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The RNA binding protein RBM38 (RNPC1) regulates splicing during late erythroid differentiation von Heinicke, Laurie A, Nabet, Behnam, Shen, Shihao, Jiang, Peng, van Zalen, Sebastiaan, Cieply, Benjamin, Russell, J Eric, Xing, Yi, Carstens, Russ P

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