Retooling phage display with electrohydrodynamic nanomixing and nanopore sequencing von Raftery, Lyndon J, Howard, Christopher B, Grewal, Yadveer S, Vaidyanathan, Ramanathan, Jones, Martina L, Anderson, Will, Korbie, Darren, Duarte, Tania, Cao, Minh Duc, Nguyen, Son Hoang, Coin, Lachlan J. M, Mahler, Stephen M, Trau, Matt

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Ongoing human chromosome end extension revealed by analysis of BioNano and nanopore data von Shao, Haojing, Zhou, Chenxi, Cao, Minh Duc, Coin, Lachlan J. M.

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Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learning von Teng, Haotian, Cao, Minh Duc, Hall, Michael B, Duarte, Tania, Wang, Sheng, Coin, Lachlan J M

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Pasa: leveraging population pangenome graph to scaffold prokaryote genome assemblies von Do, Van Hoan, Nguyen, Son Hoang, Le, Duc Quang, Nguyen, Tam Thi, Nguyen, Canh Hao, Ho, Tho Huu, Vo, Nam S, Nguyen, Trang, Nguyen, Hoang Anh, Cao, Minh Duc

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AMRViz enables seamless genomics analysis and visualization of antimicrobial resistance von Le, Duc Quang, Nguyen, Son Hoang, Nguyen, Tam Thi, Nguyen, Canh Hao, Ho, Tho Huu, Vo, Nam S, Nguyen, Trang, Nguyen, Hoang Anh, Cao, Minh Duc

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Efficient inference of large prokaryotic pangenomes with PanTA von Le, Duc Quang, Nguyen, Tien Anh, Nguyen, Son Hoang, Nguyen, Tam Thi, Nguyen, Canh Hao, Phung, Huong Thanh, Ho, Tho Huu, Vo, Nam S, Nguyen, Trang, Nguyen, Hoang Anh, Cao, Minh Duc

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Scaffolding and completing genome assemblies in real-time with nanopore sequencing von Cao, Minh Duc, Nguyen, Son Hoang, Ganesamoorthy, Devika, Elliott, Alysha G., Cooper, Matthew A., Coin, Lachlan J. M.

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AMRomics: a scalable workflow to analyze large microbial genome collections von Le, Duc Quang, Nguyen, Tam Thi, Nguyen, Canh Hao, Ho, Tho Huu, Vo, Nam S, Nguyen, Trang, Nguyen, Hoang Anh, Vinh, Le Sy, Dang, Thanh Hai, Cao, Minh Duc, Nguyen, Son Hoang

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Emerging technologies for telemedicine von Cao, Minh Duc, Minh, Cao Duc, Shimizu, Shuji, Antoku, Yasuaki, Torata, Nobuhiro, Kudo, Kuriko, Okamura, Koji, Nakashima, Naoki, Tanaka, Masao

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Inferring short tandem repeat variation from paired-end short reads von Cao, Minh Duc, Tasker, Edward, Willadsen, Kai, Imelfort, Michael, Vishwanathan, Sailaja, Sureshkumar, Sridevi, Balasubramanian, Sureshkumar, Bodén, Mikael

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Real-time resolution of short-read assembly graph using ONT long reads von Nguyen, Son Hoang, Cao, Minh Duc, Coin, Lachlan J. M.

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npInv: accurate detection and genotyping of inversions using long read sub-alignment von Shao, Haojing, Ganesamoorthy, Devika, Duarte, Tania, Cao, Minh Duc, Hoggart, Clive J, Coin, Lachlan J M

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Simulating the dynamics of targeted capture sequencing with CapSim von Cao, Minh Duc, Ganesamoorthy, Devika, Zhou, Chenxi, Coin, Lachlan J M

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Realtime analysis and visualization of MinION sequencing data with npReader von Cao, Minh Duc, Ganesamoorthy, Devika, Cooper, Matthew A, Coin, Lachlan J M

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Whole genome deep sequencing analysis of cell-free DNA in samples with low tumour content von Ganesamoorthy, Devika, Robertson, Alan James, Chen, Wenhan, Hall, Michael B, Cao, Minh Duc, Ferguson, Kaltin, Lakhani, Sunil R, Nones, Katia, Simpson, Peter T, Coin, Lachlan J M

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Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION(TM) sequencing von Cao, Minh Duc, Ganesamoorthy, Devika, Elliott, Alysha G, Zhang, Huihui, Cooper, Matthew A, Coin, Lachlan J M

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Octapeptin C4 and polymyxin resistance occur via distinct pathways in an epidemic XDR Klebsiella pneumoniae ST258 isolate von Pitt, Miranda E, Cao, Minh Duc, Butler, Mark S, Ramu, Soumya, Ganesamoorthy, Devika, Blaskovich, Mark A T, Coin, Lachlan J M, Cooper, Matthew A

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Sequencing technologies and tools for short tandem repeat variation detection von Cao, Minh Duc, Balasubramanian, Sureshkumar, Bodén, Mikael

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GtTR: Bayesian estimation of absolute tandem repeat copy number using sequence capture and high throughput sequencing von Ganesamoorthy, Devika, Cao, Minh Duc, Duarte, Tania, Chen, Wenhan, Coin, Lachlan

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Real-time demultiplexing Nanopore barcoded sequencing data with npBarcode von Nguyen, Son Hoang, Duarte, Tania P S, Coin, Lachlan J M, Cao, Minh Duc

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