Get Spliced: Uniting Alternative Splicing and Arthritis von van Haaren, Maurice J H, Steller, Levina Bertina, Vastert, Sebastiaan J, Calis, Jorg J A, van Loosdregt, Jorg

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Properties of MHC class I presented peptides that enhance immunogenicity von Calis, Jorg J A, Maybeno, Matt, Greenbaum, Jason A, Weiskopf, Daniela, De Silva, Aruna D, Sette, Alessandro, Keşmir, Can, Peters, Bjoern

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Degenerate T-cell recognition of peptides on MHC molecules creates large holes in the T-cell repertoire von Calis, Jorg J A, de Boer, Rob J, Keşmir, Can

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Role of peptide processing predictions in T cell epitope identification: contribution of different prediction programs von Calis, Jorg J. A., Reinink, Peter, Keller, Christin, Kloetzel, Peter M., Keşmir, Can

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Characterizing immune repertoires by high throughput sequencing: strategies and applications von Calis, Jorg J.A, Rosenberg, Brad R

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Complex Autoinflammatory Syndrome Unveils Fundamental Principles of JAK1 Kinase Transcriptional and Biochemical Function von Gruber, Conor N., Calis, Jorg J.A., Buta, Sofija, Evrony, Gilad, Martin, Jerome C., Uhl, Skyler A., Caron, Rachel, Jarchin, Lauren, Dunkin, David, Phelps, Robert, Webb, Bryn D., Saland, Jeffrey M., Merad, Miriam, Orange, Jordan S., Mace, Emily M., Rosenberg, Brad R., Gelb, Bruce D., Bogunovic, Dusan

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Human ADAR1 Prevents Endogenous RNA from Triggering Translational Shutdown von Chung, Hachung, Calis, Jorg J.A., Wu, Xianfang, Sun, Tony, Yu, Yingpu, Sarbanes, Stephanie L., Dao Thi, Viet Loan, Shilvock, Abigail R., Hoffmann, H.-Heinrich, Rosenberg, Brad R., Rice, Charles M.

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Human Plaque Myofibroblasts to Study Mechanisms of Atherosclerosis von Buono, Michele F, Benavente, Ernest Diez, Slenders, Lotte, Methorst, Daisey, Tessels, Daniëlle, Mili, Eloi, Finger, Roxy, Kapteijn, Daniek, Daniels, Mark, van den Dungen, Noortje A M, Calis, Jorg J A, Mol, Barend M, de Borst, Gert J, de Kleijn, Dominique P V, Pasterkamp, Gerard, den Ruijter, Hester M, Mokry, Michal

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Exploratory Study of Predicted Indirectly ReCognizable HLA Epitopes in Mismatched Hematopoietic Cell Transplantations von Geneugelijk, Kirsten, Thus, Kirsten A, van Deutekom, Hanneke W M, Calis, Jorg J A, Borst, Eric, Keşmir, Can, Oudshoorn, Machteld, van der Holt, Bronno, Meijer, Ellen, Zeerleder, Sacha, de Groot, Marco R, von dem Borne, Peter A, Schaap, Nicolaas, Cornelissen, Jan, Kuball, Jürgen, Spierings, Eric

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Developmental programming in human umbilical cord vein endothelial cells following fetal growth restriction von Terstappen, Fieke, Calis, Jorg J. A., Paauw, Nina D., Joles, Jaap A., van Rijn, Bas B., Mokry, Michal, Plosch, Torsten, Lely, A. Titia

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N6-Methyladenosine Directly Regulates CD40L Expression in CD4+ T Lymphocytes von van Vroonhoven, Ellen C. N., Picavet, Lucas W., Scholman, Rianne C., van den Dungen, Noortje A. M., Mokry, Michal, Evers, Anouk, Lebbink, Robert J., Calis, Jorg J. A., Vastert, Sebastiaan J., van Loosdregt, Jorg

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Cyclin F Controls Cell-Cycle Transcriptional Outputs by Directing the Degradation of the Three Activator E2Fs von Clijsters, Linda, Hoencamp, Claire, Calis, Jorg J.A., Marzio, Antonio, Handgraaf, Shanna M., Cuitino, Maria C., Rosenberg, Brad R., Leone, Gustavo, Pagano, Michele

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High-throughput epitope discovery reveals frequent recognition of neo-antigens by CD4+ T cells in human melanoma von Linnemann, Carsten, van Buuren, Marit M, Bies, Laura, Verdegaal, Els M E, Schotte, Remko, Calis, Jorg J A, Behjati, Sam, Velds, Arno, Hilkmann, Henk, Atmioui, Dris el, Visser, Marten, Stratton, Michael R, Haanen, John B A G, Spits, Hergen, van der Burg, Sjoerd H, Schumacher, Ton N M

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Genome-wide association analysis in dilated cardiomyopathy reveals two new players in systolic heart failure on chromosomes 3p25.1 and 22q11.23 von Garnier, Sophie, Harakalova, Magdalena, Weiss, Stefan, Mokry, Michal, Regitz-Zagrosek, Vera, Hengstenberg, Christian, Cappola, Thomas P, Isnard, Richard, Arbustini, Eloisa, Cook, Stuart A, van Setten, Jessica, Calis, Jorg J A, Hakonarson, Hakon, Morley, Michael P, Stark, Klaus, Prasad, Sanjay K, Li, Jin, O'Regan, Declan P, Grasso, Maurizia, Müller-Nurasyid, Martina, Meitinger, Thomas, Empana, Jean-Philippe, Strauch, Konstantin, Waldenberger, Melanie, Marguiles, Kenneth B, Seidman, Christine E, Kararigas, Georgios, Meder, Benjamin, Haas, Jan, Boutouyrie, Pierre, Lacolley, Patrick, Jouven, Xavier, Erdmann, Jeanette, Blankenberg, Stefan, Wichter, Thomas, Ruppert, Volker, Tavazzi, Luigi, Dubourg, Olivier, Roizes, Gérard, Dorent, Richard, de Groote, Pascal, Fauchier, Laurent, Trochu, Jean-Noël, Aupetit, Jean-François, Bilinska, Zofia T, Germain, Marine, Völker, Uwe, Hemerich, Daiane, Raji, Ibticem, Bacq-Daian, Delphine, Proust, Carole, Remior, Paloma, Gomez-Bueno, Manuel, Lehnert, Kristin, Maas, Renee, Olaso, Robert, Saripella, Ganapathi Varma, Felix, Stephan B, McGinn, Steven, Duboscq-Bidot, Laëtitia, van Mil, Alain, Besse, Céline, Fontaine, Vincent, Blanché, Hélène, Ader, Flavie, Keating, Brendan, Curjol, Angélique, Boland, Anne, Komajda, Michel, Cambien, François, Deleuze, Jean-François, Dörr, Marcus, Asselbergs, Folkert W, Villard, Eric, Trégouët, David-Alexandre, Charron, Philippe

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Transcriptome of airway neutrophils reveals an interferon response in life-threatening respiratory syncytial virus infection von Besteman, Sjanna B., Callaghan, Amie, Langedijk, Annefleur C., Hennus, Marije P., Meyaard, Linde, Mokry, Michal, Bont, Louis J., Calis, Jorg J.A.

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Recombinant Interleukin‐1 Receptor Antagonist Is an Effective First‐Line Treatment Strategy in New‐Onset Systemic Juvenile Idiopathic Arthritis, Irrespective of HLA‐DRB1 Background... von Erkens, Remco G. A., Calis, Jorg J. A., Verwoerd, Anouk, De Roock, Sytze, Ter Haar, Nienke M., Den Engelsman, Gerda, Van der Veken, Lars T., Ernst, Robert F., Van Deutekom, Hanneke W. M., Pickering, Alex, Scholman, Rianne C., Jansen, Marc H. A., Swart, Joost F., Sinha, Rashmi, Roth, Johannes, Schulert, Grant S., Grom, Alexei A., Van Loosdregt, Jorg, Vastert, Sebastiaan J.

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Predicted indirectly recognizable HLA epitopes presented by HLA-DR correlate with the de novo development of donor-specific HLA IgG antibodies after kidney transplantation von Otten, Henny G, Calis, Jorg J.A, Keşmir, Can, van Zuilen, Arjan D, Spierings, Eric

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MHC class I molecules exploit the low G+C content of pathogen genomes for enhanced presentation von Calis, Jorg J.A, Sanchez-Perez, Gabino F, Keşmir, Can

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N6-methyladenosine promotes TNF mRNA degradation in CD4+ T lymphocytes von van Vroonhoven, Ellen C N, Picavet, Lucas W, Scholman, Rianne C, Sijbers, Lyanne J P M, Kievit, Corlinda R E, van den Dungen, Noortje A M, Mokry, Michal, Evers, Anouk, Lebbink, Robert J, Mocholi, Enric, Coffer, Paul J, Calis, Jorg J A, Vastert, Sebastiaan J, van Loosdregt, Jorg

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N 6 -Methyladenosine Directly Regulates CD40L Expression in CD4 + T Lymphocytes von van Vroonhoven, Ellen C N, Picavet, Lucas W, Scholman, Rianne C, van den Dungen, Noortje A M, Mokry, Michal, Evers, Anouk, Lebbink, Robert J, Calis, Jorg J A, Vastert, Sebastiaan J, van Loosdregt, Jorg

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