Identification of direct targets and modified bases of RNA cytosine methyltransferases von Khoddami, Vahid, Cairns, Bradley R

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The biology of chromatin remodeling complexes von Clapier, Cedric R, Cairns, Bradley R

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Age-associated sperm DNA methylation alterations: possible implications in offspring disease susceptibility von Jenkins, Timothy G, Aston, Kenneth I, Pflueger, Christian, Cairns, Bradley R, Carrell, Douglas T

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Chromatin and Transcription Transitions of Mammalian Adult Germline Stem Cells and Spermatogenesis von Hammoud, Saher Sue, Low, Diana H.P., Yi, Chongil, Carrell, Douglas T., Guccione, Ernesto, Cairns, Bradley R.

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Reprogramming the Maternal Zebrafish Genome after Fertilization to Match the Paternal Methylation Pattern von Potok, Magdalena E., Nix, David A., Parnell, Timothy J., Cairns, Bradley R.

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Transcriptome-wide profiling of multiple RNA modifications simultaneously at single-base resolution von Khoddami, Vahid, Yerra, Archana, Mosbruger, Timothy L., Fleming, Aaron M., Burrows, Cynthia J., Cairns, Bradley R.

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Conserved roles of mouse DUX and human DUX4 in activating cleavage-stage genes and MERVL/HERVL retrotransposons von Hendrickson, Peter G, Doráis, Jessie A, Grow, Edward J, Whiddon, Jennifer L, Lim, Jong-Won, Wike, Candice L, Weaver, Bradley D, Pflueger, Christian, Emery, Benjamin R, Wilcox, Aaron L, Nix, David A, Peterson, C Matthew, Tapscott, Stephen J, Carrell, Douglas T, Cairns, Bradley R

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Single-cell analysis of the developing human testis reveals somatic niche cell specification and fetal germline stem cell establishment von Guo, Jingtao, Sosa, Enrique, Chitiashvili, Tsotne, Nie, Xichen, Rojas, Ernesto Javier, Oliver, Elizabeth, Plath, Kathrin, Hotaling, James M., Stukenborg, Jan-Bernd, Clark, Amander T., Cairns, Bradley R.

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Distinctive chromatin in human sperm packages genes for embryo development von Carrell, Douglas T, Cairns, Bradley R, Hammoud, Saher Sue, Nix, David A, Zhang, Haiying, Purwar, Jahnvi

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The Dynamic Transcriptional Cell Atlas of Testis Development during Human Puberty von Guo, Jingtao, Nie, Xichen, Giebler, Maria, Mlcochova, Hana, Wang, Yueqi, Grow, Edward J., Kim, Robin, Tharmalingam, Melissa, Matilionyte, Gabriele, Lindskog, Cecilia, Carrell, Douglas T., Mitchell, Rod T., Goriely, Anne, Hotaling, James M., Cairns, Bradley R.

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Structure of the RSC complex bound to the nucleosome von Ye, Youpi, Wu, Hao, Chen, Kangjing, Clapier, Cedric R, Verma, Naveen, Zhang, Wenhao, Deng, Haiteng, Cairns, Bradley R, Gao, Ning, Chen, Zhucheng

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Aberrant sperm DNA methylation predicts male fertility status and embryo quality von Aston, Kenneth I., Ph.D, Uren, Philip J., Ph.D, Jenkins, Timothy G., Ph.D, Horsager, Alan, Ph.D, Cairns, Bradley R., Ph.D, Smith, Andrew D., Ph.D, Carrell, Douglas T., Ph.D

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Chromatin and Single-Cell RNA-Seq Profiling Reveal Dynamic Signaling and Metabolic Transitions during Human Spermatogonial Stem Cell Development von Guo, Jingtao, Grow, Edward J., Yi, Chongil, Mlcochova, Hana, Maher, Geoffrey J., Lindskog, Cecilia, Murphy, Patrick J., Wike, Candice L., Carrell, Douglas T., Goriely, Anne, Hotaling, James M., Cairns, Bradley R.

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Regulation of DNA Translocation Efficiency within the Chromatin Remodeler RSC/Sth1 Potentiates Nucleosome Sliding and Ejection von Clapier, Cedric R., Kasten, Margaret M., Parnell, Timothy J., Viswanathan, Ramya, Szerlong, Heather, Sirinakis, George, Zhang, Yongli, Cairns, Bradley R.

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Alterations in sperm DNA methylation patterns at imprinted loci in two classes of infertility von Hammoud, Saher Sue, B.S, Purwar, Jahnvi, B.S, Pflueger, Christian, M.S, Cairns, Bradley R., Ph.D, Carrell, Douglas T., Ph.D

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Dissecting mammalian spermatogenesis using spatial transcriptomics von Chen, Haiqi, Murray, Evan, Sinha, Anubhav, Laumas, Anisha, Li, Jilong, Lesman, Daniel, Nie, Xichen, Hotaling, Jim, Guo, Jingtao, Cairns, Bradley R., Macosko, Evan Z., Cheng, C. Yan, Chen, Fei

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Genes for embryo development are packaged in blocks of multivalent chromatin in zebrafish sperm von Wu, Shan-Fu, Zhang, Haiying, Cairns, Bradley R

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DNA Demethylation in Zebrafish Involves the Coupling of a Deaminase, a Glycosylase, and Gadd45 von Rai, Kunal, Huggins, Ian J., James, Smitha R., Karpf, Adam R., Jones, David A., Cairns, Bradley R.

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p53 convergently activates Dux/DUX4 in embryonic stem cells and in facioscapulohumeral muscular dystrophy cell models von Grow, Edward J., Weaver, Bradley D., Smith, Christina M., Guo, Jingtao, Stein, Paula, Shadle, Sean C., Hendrickson, Peter G., Johnson, Nicholas E., Butterfield, Russell J., Menafra, Roberta, Kloet, Susan L., van der Maarel, Silvère M., Williams, Carmen J., Cairns, Bradley R.

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Paternal aging and associated intraindividual alterations of global sperm 5-methylcytosine and 5-hydroxymethylcytosine levels von Jenkins, Timothy G., B.S, Aston, Kenneth I., Ph.D, Cairns, Bradley R., Ph.D, Carrell, Douglas T., Ph.D

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