Maternal carriage of Prevotella during pregnancy associates with protection against food allergy in the offspring von Vuillermin, Peter J., O’Hely, Martin, Collier, Fiona, Allen, Katrina J., Tang, Mimi L. K., Harrison, Leonard C., Carlin, John B., Saffery, Richard, Ranganathan, Sarath, Sly, Peter D., Gray, Lawrence, Molloy, John, Pezic, Angela, Conlon, Michael, Topping, David, Nelson, Karen, Mackay, Charles R., Macia, Laurence, Koplin, Jennifer, Dawson, Samantha L., Moreno-Betancur, Margarita, Ponsonby, Anne-Louise

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Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage von Dupont, Chris L, Rusch, Douglas B, Yooseph, Shibu, Lombardo, Mary-Jane, Alexander Richter, R, Valas, Ruben, Novotny, Mark, Yee-Greenbaum, Joyclyn, Selengut, Jeremy D, Haft, Dan H, Halpern, Aaron L, Lasken, Roger S, Nealson, Kenneth, Friedman, Robert, Craig Venter, J

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Interplay between the human gut microbiome and host metabolism von Visconti, Alessia, Le Roy, Caroline I., Rosa, Fabio, Rossi, Niccolò, Martin, Tiphaine C., Mohney, Robert P., Li, Weizhong, de Rinaldis, Emanuele, Bell, Jordana T., Venter, J. Craig, Nelson, Karen E., Spector, Tim D., Falchi, Mario

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The blood DNA virome in 8,000 humans von Moustafa, Ahmed, Xie, Chao, Kirkness, Ewen, Biggs, William, Wong, Emily, Turpaz, Yaron, Bloom, Kenneth, Delwart, Eric, Nelson, Karen E, Venter, J Craig, Telenti, Amalio

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Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease von Loomba, Rohit, Seguritan, Victor, Li, Weizhong, Long, Tao, Klitgord, Niels, Bhatt, Archana, Dulai, Parambir Singh, Caussy, Cyrielle, Bettencourt, Richele, Highlander, Sarah K., Jones, Marcus B., Sirlin, Claude B., Schnabl, Bernd, Brinkac, Lauren, Schork, Nicholas, Chen, Chi-Hua, Brenner, David A., Biggs, William, Yooseph, Shibu, Venter, J. Craig, Nelson, Karen E.

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Library preparation methodology can influence genomic and functional predictions in human microbiome research von Jones, Marcus B., Highlander, Sarah K., Anderson, Ericka L., Li, Weizhong, Dayrit, Mark, Klitgord, Niels, Fabani, Martin M., Seguritan, Victor, Green, Jessica, Pride, David T., Yooseph, Shibu, Biggs, William, Nelson, Karen E., Venter, J. Craig

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Functional characterization of 3D protein structures informed by human genetic diversity von Hicks, Michael, Bartha, Istvan, di Iulio, Julia, Venter, J. Craig, Telenti, Amalio

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Design and synthesis of a minimal bacterial genome von Hutchison, Clyde A., Chuang, Ray-Yuan, Noskov, Vladimir N., Assad-Garcia, Nacyra, Deerinck, Thomas J., Ellisman, Mark H., Gill, John, Kannan, Krishna, Karas, Bogumil J., Ma, Li, Pelletier, James F., Qi, Zhi-Qing, Richter, R. Alexander, Strychalski, Elizabeth A., Sun, Lijie, Suzuki, Yo, Tsvetanova, Billyana, Wise, Kim S., Smith, Hamilton O., Glass, John I., Merryman, Chuck, Gibson, Daniel G., Venter, J. Craig

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Enzymatic assembly of DNA molecules up to several hundred kilobases von Gibson, Daniel G, Young, Lei, Chuang, Ray-Yuan, Venter, J Craig, Hutchison, Clyde A, Smith, Hamilton O

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The Human Microbiome and Cancer von Rajagopala, Seesandra V, Vashee, Sanjay, Oldfield, Lauren M, Suzuki, Yo, Venter, J Craig, Telenti, Amalio, Nelson, Karen E

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Identification of Misclassified ClinVar Variants via Disease Population Prevalence von Shah, Naisha, Hou, Ying-Chen Claire, Yu, Hung-Chun, Sainger, Rachana, Caskey, C. Thomas, Venter, J. Craig, Telenti, Amalio

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Deep sequencing of 10,000 human genomes von Telenti, Amalio, Pierce, Levi C. T., Biggs, William H., di Iulio, Julia, Wong, Emily H. M., Fabani, Martin M., Kirkness, Ewen F., Moustafa, Ahmed, Shah, Naisha, Xie, Chao, Brewerton, Suzanne C., Bulsara, Nadeem, Garner, Chad, Metzker, Gary, Sandoval, Efren, Perkins, Brad A., Och, Franz J., Turpaz, Yaron, Venter, J. Craig

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Precision medicine integrating whole-genome sequencing, comprehensive metabolomics, and advanced imaging von Hou, Ying-Chen Claire, Yu, Hung-Chun, Martin, Rick, Cirulli, Elizabeth T., Schenker-Ahmed, Natalie M., Hicks, Michael, Cohen, Isaac V., Jönsson, Thomas J., Heister, Robyn, Napier, Lori, Swisher, Christine Leon, Dominguez, Saints, Tang, Haibao, Li, Weizhong, Perkins, Bradley A., Barea, Jaime, Rybak, Christina, Smith, Emily, Duchicela, Keegan, Doney, Michael, Brar, Pamila, Hernandez, Nathaniel, Kirkness, Ewen F., Kahn, Andrew M., Venter, J. Craig, Karow, David S., Caskey, C. Thomas

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Structural and functional diversity of the microbial kinome von Kannan, Natarajan, Taylor, Susan S, Zhai, Yufeng, Venter, J Craig, Manning, Gerard

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A metagenomic framework for the study of airborne microbial communities von Yooseph, Shibu, Andrews-Pfannkoch, Cynthia, Tenney, Aaron, McQuaid, Jeff, Williamson, Shannon, Thiagarajan, Mathangi, Brami, Daniel, Zeigler-Allen, Lisa, Hoffman, Jeff, Goll, Johannes B, Fadrosh, Douglas, Glass, John, Adams, Mark D, Friedman, Robert, Venter, J Craig

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Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities von Dupont, Chris L, McCrow, John P, Valas, Ruben, Moustafa, Ahmed, Walworth, Nathan, Goodenough, Ursula, Roth, Robyn, Hogle, Shane L, Bai, Jing, Johnson, Zackary I, Mann, Elizabeth, Palenik, Brian, Barbeau, Katherine A, Craig Venter, J, Allen, Andrew E

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Identification of individuals by trait prediction using whole-genome sequencing data von Lippert, Christoph, Sabatini, Riccardo, Maher, M. Cyrus, Kang, Eun Yong, Lee, Seunghak, Arikan, Okan, Harley, Alena, Bernal, Axel, Garst, Peter, Lavrenko, Victor, Yocum, Ken, Wong, Theodore, Zhu, Mingfu, Yang, Wen-Yun, Chang, Chris, Lu, Tim, Lee, Charlie W. H., Hicks, Barry, Ramakrishnan, Smriti, Tang, Haibao, Xie, Chao, Piper, Jason, Brewerton, Suzanne, Turpaz, Yaron, Telenti, Amalio, Roby, Rhonda K., Och, Franz J., Venter, J. Craig

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Profiling of Short-Tandem-Repeat Disease Alleles in 12,632 Human Whole Genomes von Tang, Haibao, Kirkness, Ewen F., Lippert, Christoph, Biggs, William H., Fabani, Martin, Guzman, Ernesto, Ramakrishnan, Smriti, Lavrenko, Victor, Kakaradov, Boyko, Hou, Claire, Hicks, Barry, Heckerman, David, Och, Franz J., Caskey, C. Thomas, Venter, J. Craig, Telenti, Amalio

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Designer diatom episomes delivered by bacterial conjugation von Karas, Bogumil J., Diner, Rachel E., Lefebvre, Stephane C., McQuaid, Jeff, Phillips, Alex P.R., Noddings, Chari M., Brunson, John K., Valas, Ruben E., Deerinck, Thomas J., Jablanovic, Jelena, Gillard, Jeroen T.F., Beeri, Karen, Ellisman, Mark H., Glass, John I., Hutchison III, Clyde A., Smith, Hamilton O., Venter, J. Craig, Allen, Andrew E., Dupont, Christopher L., Weyman, Philip D.

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Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease von Loomba, Rohit, Seguritan, Victor, Li, Weizhong, Long, Tao, Klitgord, Niels, Bhatt, Archana, Dulai, Parambir Singh, Caussy, Cyrielle, Bettencourt, Richele, Highlander, Sarah K., Jones, Marcus B., Sirlin, Claude B., Schnabl, Bernd, Brinkac, Lauren, Schork, Nicholas, Chen, Chi-Hua, Brenner, David A., Biggs, William, Yooseph, Shibu, Venter, J. Craig, Nelson, Karen E.

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