p53 cooperates with DNA methylation and a suicidal interferon response to maintain epigenetic silencing of repeats and noncoding RNAs von Leonova, Katerina I, Brodsky, Leonid, Lipchick, Brittany, Pal, Mahadeb, Novototskaya, Liliya, Chenchik, Alex A, Sen, Ganes C, Komarova, Elena A, Gudkov, Andrei V

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165 Microsampling for RNA biomarker profiling in blood von Kobzik, Lester, Makhanov, Mikhail, Chenchik, Alex

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154 Universal synthetic spike-in controls for accurate adaptive immune receptor profiling von Chenchik, Alex, Liu, Tianbing, Makhanov, Mikhail, Hu, Dongfang, Diehl, Paul

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Oncogenic context shapes the fitness landscape of tumor suppression von Blair, Lily M., Juan, Joseph M., Sebastian, Lafia, Tran, Vy B., Nie, Wensheng, Wall, Gregory D., Gerceker, Mehmet, Lai, Ian K., Apilado, Edwin A., Grenot, Gabriel, Amar, David, Foggetti, Giorgia, Do Carmo, Mariana, Ugur, Zeynep, Deng, Debbie, Chenchik, Alex, Paz Zafra, Maria, Dow, Lukas E., Politi, Katerina, MacQuitty, Jonathan J., Petrov, Dmitri A., Winslow, Monte M., Rosen, Michael J., Winters, Ian P.

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Peptides genetically selected for NF-κB activation cooperate with oncogene Ras and model carcinogenic role of inflammation von Natarajan, Venkatesh, Komarov, Andrei P., Ippolito, Thomas, Bonneau, Kyle, Chenchik, Alex A., Gudkov, Andrei V.

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Long-distance effects of insertional mutagenesis von Singhal, Ruchi, Deng, Xiaotao, Chenchik, Alex A, Kandel, Eugene S

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shRNA library screening identifies nucleocytoplasmic transport as a mediator of BCR-ABL1 kinase-independent resistance von Khorashad, Jamshid S., Eiring, Anna M., Mason, Clinton C., Gantz, Kevin C., Bowler, Amber D., Redwine, Hannah M., Yu, Fan, Kraft, Ira L., Pomicter, Anthony D., Reynolds, Kimberly R., Iovino, Anthony J., Zabriskie, Matthew S., Heaton, William L., Tantravahi, Srinivas K., Kauffman, Michael, Shacham, Sharon, Chenchik, Alex, Bonneau, Kyle, Ullman, Katharine S., O'Hare, Thomas, Deininger, Michael W.

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Measurement of Cancer Cell Growth Heterogeneity through Lentiviral Barcoding Identifies Clonal Dominance as a Characteristic of In Vivo Tumor Engraftment von Nolan-Stevaux, Olivier, Tedesco, Donato, Ragan, Seamus, Makhanov, Mikhail, Chenchik, Alex, Ruefli-Brasse, Astrid, Quon, Kim, Kassner, Paul D

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The 10th Santorini conference: Systems medicine, personalised health and therapy. "The odyssey from hope to practice: Patient first. Keep Ithaca always in your mind ", Santorini, G... von Visvikis-Siest, Sophie, Stathopoulou, Maria G, Sunder-Plassmann, Raute, Alizadeh, Behrooz Z, Barouki, Robert, Chatzaki, Ekaterina, Dagher, Georges, Dedoussis, George, Deloukas, Panagiotis, Haliassos, Alexander, Hiegel, Brigitte Boisson, Manolopoulos, Vangelis, Masson, Christine, Paré, Guillaume, Paulmichl, Markus, Petrelis, Alexandros M, Sipeky, Csilla, Süsleyici, Belgin, Weryha, Georges, Chenchik, Alex, Diehl, Paul, Everts, Robin E, Haushofer, Alexander, Lamont, John, Mercado, Ruth, Meyer, Heiko, Munoz-Galeano, Herna, Murray, Helena, Nhat, Ferrier, Nofziger, Charity, Schnitzel, Wolfgang, Kanoni, Stavroula

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Use of RNAi screens to uncover resistance mechanisms in cancer cells and identify synthetic lethal interactions von Diehl, Paul, Tedesco, Donato, Chenchik, Alex

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Gene Expression Profiling in Postmortem Rett Syndrome Brain: Differential Gene Expression and Patient Classification von Colantuoni, Carlo, Jeon, Ok-Hee, Hyder, Karim, Chenchik, Alex, Khimani, Anis H., Narayanan, Vinodh, Hoffman, Eric P., Kaufmann, Walter E., Naidu, SakkuBai, Pevsner, Jonathan

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Abstract 3426: Combining cell barcoding and CRISPR sgRNA libraries with targeted gene expression for single-cell genetic analysis of tumor metastasis von Chenchik, Alex, Diehl, Paul, Makhanov, Mikhail

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Synthetic TCR/BCR RNA spike-in controls for assessing immune receptor profiling assay accuracy von Chenchik, Alex, Liu, Tianbing, Makhanov, Mikhail, Hu, Dongfang, Ghias, Khadija, Diehl, Paul

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Streamlined 96-well plate method for simultaneous single-cell TCR immune receptor repertoire analysis and immunophenotyping von Chenchik, Alex, Liu, Tianbing, Makhanov, Mikhail, Hu, Dongfang, Kobzik, Lester, Ghias, Khadija, Diehl, Paul

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Longitudinal analysis of immunological response to vaccination von Chenchik, Alex, Kobzik, Lester, Liu, Tianbing, Hu, Dongfang, Makhanov, Mikhail, Paraiso, Kitt, Ghias, Khadija, Diehl, Paul

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T-cell and B-cell receptor repertoire profiling for biomarker discovery von Chenchik, Alex, Makhanov, Mikhail, Liu, Tianbing, Hu, Dongfang, Diehl, Paul, Kobzik, Lester

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Blood immune receptor repertoire and transcription profiling to characterize disease progression in a murine tuberculosis model von Kobzik, Lester, Chenchik, Alex, Hu, Dongfang, Makhanov, Mikhail, Paraiso, Kitt, Ghias, Khadija, Diehl, Paul, Yabaji, Shivraj, Kramnik, Igor

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Screening of cell death genes with a mammalian genome-wide RNAi library von Tsujii, Hisayo, Eguchi, Yutaka, Chenchik, Alex, Mizutani, Takayuki, Yamada, Kayoko, Tsujimoto, Yoshihide

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Abstract A059: Targeted RNA expression profiling for biomarker discovery in complex biologic samples von Chenchik, Alex, Frangou, Costa, Makhanov, Mikhail

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Specific pattern of p53 phosphorylation during nitric oxide-induced cell cycle arrest von NAKAYA, Naoki, LOWE, Scott W, TAYA, Yoichi, CHENCHIK, Alex, ENIKOLOPOV, Grigori

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