Optimizing RNA-Seq Mapping with STAR von Dobin, Alexander, Gingeras, Thomas R.

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A User’s Guide to Support Vector Machines von Ben-Hur, Asa, Weston, Jason

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Predicting residue solvent accessibility from protein sequence by considering the sequence environment von Carugo, O.

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Protein—protein crystal‐packing contacts von Carugo, Oliviero, Argos, Patrick

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Correlation between occupancy and B factor of water molecules in protein crystal structures von Carugo, O.

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Recommendation Techniques for Drug–Target Interaction Prediction and Drug Repositioning von Alaimo, Salvatore, Giugno, Rosalba, Pulvirenti, Alfredo

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Vicinal disulfide turns von Carugo, Oliviero, Čemažar, Maša, Zahariev, Sotir, Hudáky, Ilona, Gáspári, Zoltán, Perczel, András, Pongor, Sándor

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When X-rays modify the protein structure: radiation damage at work von Carugo, Oliviero, Carugo, Kristina Djinović

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Protein Residue Contacts and Prediction Methods von Adhikari, Badri, Cheng, Jianlin

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The MIntAct Project and Molecular Interaction Databases von Licata, Luana, Orchard, Sandra

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Applications of Protein Thermodynamic Database for Understanding Protein Mutant Stability and Designing Stable Mutants von Gromiha, M. Michael, Anoosha, P., Huang, Liang-Tsung

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Criteria to Extract High-Quality Protein Data Bank Subsets for Structure Users von Carugo, Oliviero, Djinović-Carugo, Kristina

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Protein Secondary Structure Prediction von Pirovano, Walter, Heringa, Jaap

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The Recipe for Protein Sequence-Based Function Prediction and Its Implementation in the ANNOTATOR Software Environment von Eisenhaber, Birgit, Kuchibhatla, Durga, Sherman, Westley, Sirota, Fernanda L., Berezovsky, Igor N., Wong, Wing-Cheong, Eisenhaber, Frank

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Clustering Criteria and Algorithms von Carugo, Oliviero

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Update on Genomic Databases and Resources at the National Center for Biotechnology Information von Tatusova, Tatiana

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How root-mean-square distance (r.m.s.d.) values depend on the resolution of protein structures that are compared von Carugo, Oliviero

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Data Mining of Macromolecular Structures von van Beusekom, Bart, Perrakis, Anastassis, Joosten, Robbie P.

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Big Data, Evolution, and Metagenomes: Predicting Disease from Gut Microbiota Codon Usage Profiles von Fabijanić, Maja, Vlahoviček, Kristian

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A Broad Overview of Computational Methods for Predicting the Pathophysiological Effects of Non-synonymous Variants von Castellana, Stefano, Fusilli, Caterina, Mazza, Tommaso

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