Quantitative analysis of peptides and proteins in biomedicine by targeted mass spectrometry von Gillette, Michael A, Carr, Steven A

Volltext

Proteomic Mapping of the Human Mitochondrial Intermembrane Space in Live Cells via Ratiometric APEX Tagging von Hung, Victoria, Zou, Peng, Rhee, Hyun-Woo, Udeshi, Namrata D., Cracan, Valentin, Svinkina, Tanya, Carr, Steven A., Mootha, Vamsi K., Ting, Alice Y.

Volltext

RNA–protein interaction mapping via MS2- or Cas13-based APEX targeting von Han, Shuo, Zhao, Boxuan Simen, Myers, Samuel A., Carr, Steven A., He, Chuan, Ting, Alice Y.

Volltext

TMT Labeling for the Masses: A Robust and Cost-efficient, In-solution Labeling Approach[S] von Zecha, Jana, Satpathy, Shankha, Kanashova, Tamara, Avanessian, Shayan C., Kane, M. Harry, Clauser, Karl R., Mertins, Philipp, Carr, Steven A., Kuster, Bernhard

Volltext

The Matrisome: In Silico Definition and In Vivo Characterization by Proteomics of Normal and Tumor Extracellular Matrices von Naba, Alexandra, Clauser, Karl R., Hoersch, Sebastian, Liu, Hui, Carr, Steven A., Hynes, Richard O.

Volltext

Large-scale identification of ubiquitination sites by mass spectrometry von Udeshi, Namrata D, Mertins, Philipp, Svinkina, Tanya, Carr, Steven A

Volltext

The extracellular matrix: Tools and insights for the “omics” era von Naba, Alexandra, Clauser, Karl R., Ding, Huiming, Whittaker, Charles A., Carr, Steven A., Hynes, Richard O.

Volltext

Cancer proteogenomics: current impact and future prospects von Mani, D. R., Krug, Karsten, Zhang, Bing, Satpathy, Shankha, Clauser, Karl R., Ding, Li, Ellis, Matthew, Gillette, Michael A., Carr, Steven A.

Volltext

Split-TurboID enables contact-dependent proximity labeling in cells von Cho, Kelvin F., Branon, Tess C., Rajeev, Sanjana, Svinkina, Tanya, Udeshi, Namrata D., Thoudam, Themis, Kwak, Chulhwan, Rhee, Hyun-Woo, Lee, In-Kyu, Carr, Steven A., Ting, Alice Y.

Volltext

Perturbation of m6A Writers Reveals Two Distinct Classes of mRNA Methylation at Internal and 5′ Sites von Schwartz, Schraga, Mumbach, Maxwell R., Jovanovic, Marko, Wang, Tim, Maciag, Karolina, Bushkin, G. Guy, Mertins, Philipp, Ter-Ovanesyan, Dmitry, Habib, Naomi, Cacchiarelli, Davide, Sanjana, Neville E., Freinkman, Elizaveta, Pacold, Michael E., Satija, Rahul, Mikkelsen, Tarjei S., Hacohen, Nir, Zhang, Feng, Carr, Steven A., Lander, Eric S., Regev, Aviv

Volltext

Proteomic Mapping of Mitochondria in Living Cells via Spatially Restricted Enzymatic Tagging von Rhee, Hyun-Woo, Zou, Peng, Udeshi, Namrata D., Martell, Jeffrey D., Mootha, Vamsi K., Carr, Steven A., Ting, Alice Y.

Volltext

Mass Spectrometry Profiling of HLA-Associated Peptidomes in Mono-allelic Cells Enables More Accurate Epitope Prediction von Abelin, Jennifer G., Keskin, Derin B., Sarkizova, Siranush, Hartigan, Christina R., Zhang, Wandi, Sidney, John, Stevens, Jonathan, Lane, William, Zhang, Guang Lan, Eisenhaure, Thomas M., Clauser, Karl R., Hacohen, Nir, Rooney, Michael S., Carr, Steven A., Wu, Catherine J.

Volltext

The NORAD lncRNA assembles a topoisomerase complex critical for genome stability von Munschauer, Mathias, Nguyen, Celina T., Sirokman, Klara, Hartigan, Christina R., Hogstrom, Larson, Engreitz, Jesse M., Ulirsch, Jacob C., Fulco, Charles P., Subramanian, Vidya, Chen, Jenny, Schenone, Monica, Guttman, Mitchell, Carr, Steven A., Lander, Eric S.

Volltext

Spatiotemporally-resolved mapping of RNA binding proteins via functional proximity labeling reveals a mitochondrial mRNA anchor promoting stress recovery von Qin, Wei, Myers, Samuel A., Carey, Dominique K., Carr, Steven A., Ting, Alice Y.

Volltext

A Regression-Based Analysis of Ribosome-Profiling Data Reveals a Conserved Complexity to Mammalian Translation von Fields, Alexander P., Rodriguez, Edwin H., Jovanovic, Marko, Stern-Ginossar, Noam, Haas, Brian J., Mertins, Philipp, Raychowdhury, Raktima, Hacohen, Nir, Carr, Steven A., Ingolia, Nicholas T., Regev, Aviv, Weissman, Jonathan S.

Volltext

A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks von Parnas, Oren, Jovanovic, Marko, Eisenhaure, Thomas M., Herbst, Rebecca H., Dixit, Atray, Ye, Chun Jimmie, Przybylski, Dariusz, Platt, Randall J., Tirosh, Itay, Sanjana, Neville E., Shalem, Ophir, Satija, Rahul, Raychowdhury, Raktima, Mertins, Philipp, Carr, Steven A., Zhang, Feng, Hacohen, Nir, Regev, Aviv

Volltext

Lenalidomide Causes Selective Degradation of IKZF1 and IKZF3 in Multiple Myeloma Cells von Krönke, Jan, Udeshi, Namrata D., Narla, Anupama, Grauman, Peter, Hurst, Slater N., McConkey, Marie, Svinkina, Tanya, Heckl, Dirk, Comer, Eamon, Li, Xiaoyu, Ciarlo, Christie, Hartman, Emily, Munshi, Nikhil, Schenone, Monica, Schreiber, Stuart L., Carr, Steven A., Ebert, Benjamin L

Volltext

Protein biomarker discovery and validation: the long and uncertain path to clinical utility von Carr, Steven A, Rifai, Nader, Gillette, Michael A

Volltext

Rapid, deep and precise profiling of the plasma proteome with multi-nanoparticle protein corona von Blume, John E., Manning, William C., Troiano, Gregory, Hornburg, Daniel, Figa, Michael, Hesterberg, Lyndal, Platt, Theodore L., Zhao, Xiaoyan, Cuaresma, Rea A., Everley, Patrick A., Ko, Marwin, Liou, Hope, Mahoney, Max, Ferdosi, Shadi, Elgierari, Eltaher M., Stolarczyk, Craig, Tangeysh, Behzad, Xia, Hongwei, Benz, Ryan, Siddiqui, Asim, Carr, Steven A., Ma, Philip, Langer, Robert, Farias, Vivek, Farokhzad, Omid C.

Volltext

Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation von Hung, Victoria, Lam, Stephanie S, Udeshi, Namrata D, Svinkina, Tanya, Guzman, Gaelen, Mootha, Vamsi K, Carr, Steven A, Ting, Alice Y

Volltext