A petascale automated imaging pipeline for mapping neuronal circuits with high-throughput transmission electron microscopy von Yin, Wenjing, Brittain, Derrick, Borseth, Jay, Scott, Marie E., Williams, Derric, Perkins, Jedediah, Own, Christopher S., Murfitt, Matthew, Torres, Russel M., Kapner, Daniel, Mahalingam, Gayathri, Bleckert, Adam, Castelli, Daniel, Reid, David, Lee, Wei-Chung Allen, Graham, Brett J., Takeno, Marc, Bumbarger, Daniel J., Farrell, Colin, Reid, R. Clay, da Costa, Nuno Macarico

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A scalable and modular automated pipeline for stitching of large electron microscopy datasets von Mahalingam, Gayathri, Torres, Russel, Kapner, Daniel, Trautman, Eric T, Fliss, Tim, Seshamani, Shamishtaa, Perlman, Eric, Young, Rob, Kinn, Samuel, Buchanan, JoAnn, Takeno, Marc M, Yin, Wenjing, Bumbarger, Daniel J, Gwinn, Ryder P, Nyhus, Julie, Lein, Ed, Smith, Steven J, Reid, R Clay, Khairy, Khaled A, Saalfeld, Stephan, Collman, Forrest, Macarico da Costa, Nuno

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Reconstruction of neocortex: Organelles, compartments, cells, circuits, and activity von Turner, Nicholas L., Macrina, Thomas, Bae, J. Alexander, Yang, Runzhe, Wilson, Alyssa M., Schneider-Mizell, Casey, Lee, Kisuk, Lu, Ran, Wu, Jingpeng, Bodor, Agnes L., Bleckert, Adam A., Brittain, Derrick, Froudarakis, Emmanouil, Dorkenwald, Sven, Collman, Forrest, Kemnitz, Nico, Ih, Dodam, Silversmith, William M., Zung, Jonathan, Zlateski, Aleksandar, Tartavull, Ignacio, Yu, Szi-chieh, Popovych, Sergiy, Mu, Shang, Wong, William, Jordan, Chris S., Castro, Manuel, Buchanan, JoAnn, Bumbarger, Daniel J., Takeno, Marc, Torres, Russel, Mahalingam, Gayathri, Elabbady, Leila, Li, Yang, Cobos, Erick, Zhou, Pengcheng, Suckow, Shelby, Becker, Lynne, Paninski, Liam, Polleux, Franck, Reimer, Jacob, Tolias, Andreas S., Reid, R. Clay, da Costa, Nuno Maçarico, Seung, H. Sebastian

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Oligodendrocyte precursor cells ingest axons in the mouse neocortex von Buchanan, JoAnn, Elabbady, Leila, Collman, Forrest, Jorstad, Nikolas L., Bakken, Trygve E., Ott, Carolyn, Glatzer, Jenna, Bleckert, Adam A., Bodor, Agnes L., Brittain, Derrick, Bumbarger, Daniel J., Mahalingam, Gayathri, Seshamani, Sharmishtaa, Schneider-Mizell, Casey, Takeno, Marc M., Torres, Russel, Yin, Wenjing, Hodge, Rebecca D., Castro, Manuel, Dorkenwald, Sven, Ih, Dodam, Jordan, Chris S., Kemnitz, Nico, Lee, Kisuk, Lu, Ran, Macrina, Thomas, Mu, Shang, Popovych, Sergiy, Silversmith, William M., Tartavull, Ignacio, Turner, Nicholas L., Wilson, Alyssa M., Wong, William, Wu, Jingpeng, Zlateski, Aleksandar, Zung, Jonathan, Lippincott-Schwartz, Jennifer, Lein, Ed S., Seung, H. Sebastian, Bergles, Dwight E., Reid, R. Clay, da Costa, Nuno Maçarico

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Evolution of neuronal anatomy and circuitry in two highly divergent nematode species von Hong, Ray L, Riebesell, Metta, Bumbarger, Daniel J, Cook, Steven J, Carstensen, Heather R, Sarpolaki, Tahmineh, Cochella, Luisa, Castrejon, Jessica, Moreno, Eduardo, Sieriebriennikov, Bogdan, Hobert, Oliver, Sommer, Ralf J

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Binary and analog variation of synapses between cortical pyramidal neurons von Dorkenwald, Sven, Turner, Nicholas L, Macrina, Thomas, Lee, Kisuk, Lu, Ran, Wu, Jingpeng, Bodor, Agnes L, Bleckert, Adam A, Brittain, Derrick, Kemnitz, Nico, Silversmith, William M, Ih, Dodam, Zung, Jonathan, Zlateski, Aleksandar, Tartavull, Ignacio, Yu, Szi-Chieh, Popovych, Sergiy, Wong, William, Castro, Manuel, Jordan, Chris S, Wilson, Alyssa M, Froudarakis, Emmanouil, Buchanan, JoAnn, Takeno, Marc M, Torres, Russel, Mahalingam, Gayathri, Collman, Forrest, Schneider-Mizell, Casey M, Bumbarger, Daniel J, Li, Yang, Becker, Lynne, Suckow, Shelby, Reimer, Jacob, Tolias, Andreas S, Macarico da Costa, Nuno, Reid, R Clay, Seung, H Sebastian

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Structure and function of axo-axonic inhibition von Schneider-Mizell, Casey M, Bodor, Agnes L, Collman, Forrest, Brittain, Derrick, Bleckert, Adam, Dorkenwald, Sven, Turner, Nicholas L, Macrina, Thomas, Lee, Kisuk, Lu, Ran, Wu, Jingpeng, Zhuang, Jun, Nandi, Anirban, Hu, Brian, Buchanan, JoAnn, Takeno, Marc M, Torres, Russel, Mahalingam, Gayathri, Bumbarger, Daniel J, Li, Yang, Chartrand, Thomas, Kemnitz, Nico, Silversmith, William M, Ih, Dodam, Zung, Jonathan, Zlateski, Aleksandar, Tartavull, Ignacio, Popovych, Sergiy, Wong, William, Castro, Manuel, Jordan, Chris S, Froudarakis, Emmanouil, Becker, Lynne, Suckow, Shelby, Reimer, Jacob, Tolias, Andreas S, Anastassiou, Costas A, Seung, H Sebastian, Reid, R Clay, Costa, Nuno Maçarico da

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Large-scale neuroanatomy using LASSO: Loop-based Automated Serial Sectioning Operation von Lee, Timothy J, Kumar, Aditi, Balwani, Aishwarya H, Brittain, Derrick, Kinn, Sam, Tovey, Craig A, Dyer, Eva L, da Costa, Nuno M, Reid, R Clay, Forest, Craig R, Bumbarger, Daniel J

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System-wide Rewiring Underlies Behavioral Differences in Predatory and Bacterial-Feeding Nematodes von Bumbarger, Daniel J., Riebesell, Metta, Rödelsperger, Christian, Sommer, Ralf J.

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Transport and trapping of nanosheets via hydrodynamic forces and curvature-induced capillary quadrupolar interactions von Lee, Timothy J., Lewallen, Colby F., Bumbarger, Daniel J., Yunker, Peter J., Reid, R. Clay, Forest, Craig R.

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Using MicroCT to evaluate stain penetration and establish fiducial marks for high throughput electron microscopy von Buchanan, JoAnn, Takeno, Marc M., Bodor, Agnes L., Bumbarger, Daniel J., Froudarakis, E., Reimer, Jacob, Tolias, Andres S., Reid, R. Clay, da Costa, Nuno M.

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Three-dimensional reconstruction of the amphid sensilla in the microbial feeding nematode, Acrobeles complexus (nematoda: Rhabditida) von Bumbarger, Daniel J., Wijeratne, Sitara, Carter, Cale, Crum, John, Ellisman, Mark H., Baldwin, James G.

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Capillary-Based and Stokes-Based Trapping of Serial Sections for Scalable 3D-EM Connectomics von Lee, Timothy J, Yip, Mighten C, Kumar, Aditi, Lewallen, Colby F, Bumbarger, Daniel J, Reid, R Clay, Forest, Craig R

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Three-dimensional reconstruction of the nose epidermal cells in the microbial feeding nematode, Acrobeles complexus (Nematoda: Rhabditida) von Bumbarger, Daniel J., Crum, John, Ellisman, Mark H., Baldwin, James G.

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Three-dimensional fine structural reconstruction of the nose sensory structures of Acrobeles complexus compared to Caenorhabditis elegans (Nematoda: Rhabditida) von Bumbarger, Daniel J., Crum, John, Ellisman, Mark H., Baldwin, James G.

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Protocol Development for 3D Reconstructions: Combining In Vivo Imaging, APEX2 and En Bloc Staining of Mouse Visual Cortex von Buchanan, JoAnn, Takeno, Marc, Daigle, Tanya, Bleckert, Adam, Bumbarger, Daniel, Bodor, Agnes, Brittain, Derrick, Cetin, Ali, Macarico da Costa, Nuno

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Automated Neuron Shape Analysis from Electron Microscopy von Seshamani, Sharmishtaa, Elabbady, Leila, Schneider-Mizell, Casey, Mahalingam, Gayathri, Dorkenwald, Sven, Bodor, Agnes, Macrina, Thomas, Bumbarger, Daniel, Buchanan, JoAnn, Takeno, Marc, Yin, Wenjing, Brittain, Derrick, Torres, Russel, Kapner, Daniel, lee, Kisuk, Lu, Ran, Wu, Jinpeng, daCosta, Nuno, Reid, Clay, Collman, Forrest

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Data for Cell-type-specific inhibitory circuitry from a connectomic census of mouse visual cortex von Schneider-Mizell, Casey, Bodor, Agnes, Brittain, Derrick, Buchanan, JoAnn, Bumbarger, Daniel J., Elabbady, Leila, Kapner, Daniel, Kinn, Sam, Mahalingam, Gayathri, Seshamani, Sharmishtaa, Suckow, Shelby, Takeno, Marc, Torres, Russel, Yin, Wenjing, Dorkenwald, Sven, Bae, J. Alexander, Castro, Manuel A., Halageri, Akhilesh, Jia, Zhen, Jordan, Chris, Kemnitz, Nico, Lee, Kisuk, Li, Kai, Lu, Ran, Macrina, Thomas, Mitchell, Eric, Mondal, Shanka Subhra, Mu, Shang, Nehoran, Barak, Silversmith, William, Popovych, Sergiy, Turner, Nicolas, Wong, William, Wu, Jingpeng, MICrONs Consortium, Reimer, Jacob, Tobias, Andreas, Seung, H. Sebastian, Reid, R. Clay, Coleman, Forrest, da Costa, Nuno Maçarico

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Automated Neuron Shape Analysis from Electron Microscopy von Seshamani, Sharmishtaa, Elabbady, Leila, Schneider-Mizell, Casey, Mahalingam, Gayathri, Dorkenwald, Sven, Bodor, Agnes, Macrina, Thomas, Bumbarger, Daniel, Buchanan, JoAnn, Takeno, Marc, Yin, Wenjing, Brittain, Derrick, Torres, Russel, Kapner, Daniel, lee, Kisuk, Lu, Ran, Wu, Jinpeng, daCosta, Nuno, Reid, Clay, Collman, rest

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Odonata of the Beaver Creek Wetlands, Greene County, Ohio: A Preliminary Survey von Roush, SA, Bumbarger, D J

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