High-resolution metagenomics targets specific functional types in complex microbial communities von Chistoserdova, Ludmila, Kalyuzhnaya, Marina G, Lapidus, Alla, Ivanova, Natalia, Copeland, Alex C, McHardy, Alice C, Szeto, Ernest, Salamov, Asaf, Grigoriev, Igor V, Suciu, Dominic, Levine, Samuel R, Markowitz, Victor M, Rigoutsos, Isidore, Tringe, Susannah G, Bruce, David C, Richardson, Paul M, Lidstrom, Mary E

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Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae von Chun, Jongsik, Grim, Christopher J, Hasan, Nur A, Lee, Je Hee, Choi, Seon Young, Haley, Bradd J, Taviani, Elisa, Jeon, Yoon-Seong, Kim, Dong Wook, Lee, Jae-Hak, Brettin, Thomas S, Bruce, David C, Challacombe, Jean F, Detter, J. Chris, Han, Cliff S, Munk, A. Christine, Chertkov, Olga, Meincke, Linda, Saunders, Elizabeth, Walters, Ronald A, Huq, Anwar, Nair, G. Balakrish, Colwell, Rita R

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Temperature regulation of virulence factors in the pathogen Vibrio coralliilyticus von Kimes, Nikole E, Grim, Christopher J, Johnson, Wesley R, Hasan, Nur A, Tall, Ben D, Kothary, Mahendra H, Kiss, Hajnalka, Munk, A Christine, Tapia, Roxanne, Green, Lance, Detter, Chris, Bruce, David C, Brettin, Thomas S, Colwell, Rita R, Morris, Pamela J

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Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids von Smith, Theresa J, Hill, Karen K, Foley, Brian T, Detter, John C, Munk, A Christine, Bruce, David C, Doggett, Norman A, Smith, Leonard A, Marks, James D, Xie, Gary, Brettin, Thomas S

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Genome Sequence of “Candidatus Frankia datiscae” Dg1, the Uncultured Microsymbiont from Nitrogen-Fixing Root Nodules of the Dicot Datisca glomerata von PERSSON, Tomas, BENSON, David R, SHUNSHENG HAN, HAN, James, WOYKE, Tanja, PITLUCK, Sam, PENNACCHIO, Len, NOLAN, Matt, IVANOVA, Natalia, PATI, Amrita, LAND, Miriam L, PAWLOWSKI, Katharina, NORMAND, Philippe, BERRY, Alison M, VANDEN HEUVEL, Brian, PUJIC, Petar, CHERTKOV, Olga, TESHIMA, Hazuki, BRUCE, David C, DETTER, Chris, TAPIA, Roxanne

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Complete Genome of the Cellulolytic Ruminal Bacterium Ruminococcus albus 7 von SUEN, Garret, STEVENSON, David M, HAUSER, Loren J, IVANOVA, Natalia N, KYRPIDES, Nikos C, LAND, Miriam L, LAPIDUS, Alla, LUCAS, Susan, OVCHINNIKOVA, Galina, PITLUCK, Sam, TAPIA, Roxanne, WOYKE, Tanja, BRUCE, David C, BOYUM, Julie, MEAD, David, WEIMER, Paul J, CHERTKOV, Olga, COPELAND, Alex, CHENG, Jan-Feng, DETTER, Chris, DETTER, John C, GOODWIN, Lynne A, HAN, Cliff S

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Genome Sequence of the Cellulolytic Gliding Bacterium Cytophaga hutchinsonii von Xie, Gary, Bruce, David C, Challacombe, Jean F, Chertkov, Olga, Detter, John C, Gilna, Paul, Han, Cliff S, Lucas, Susan, Misra, Monica, Myers, Gerald L, Richardson, Paul, Tapia, Roxanne, Thayer, Nina, Thompson, Linda S, Brettin, Thomas S, Henrissat, Bernard, Wilson, David B, McBride, Mark J

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Genome Sequence of Hybrid Vibrio cholerae O1 MJ-1236, B-33, and CIRS101 and Comparative Genomics with V. cholerae von GRIM, Christopher J, HASAN, Nur A, CHALLACOMBE, Jean, HUQ, Anwar, BALAKRISH NAIR, G, COLWELL, Rita R, TAVIANI, Elisa, HALEY, Bradd, CHUN, Jongsik, BRETTIN, Thomas S, BRUCE, David C, DETTER, J. Chris, HAN, Cliff S, CHERTKOV, Olga

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The Methanosarcina barkeri Genome: Comparative Analysis with Methanosarcina acetivorans and Methanosarcina mazei Reveals Extensive Rearrangement within Methanosarcinal Genomes von MAEDER, Dennis L, ANDERSON, Iain, SOWERS, Kevin R, BRETTIN, Thomas S, BRUCE, David C, GILNA, Paul, HAN, Cliff S, LAPIDUS, Alla, METCALF, William W, SAUNDERS, Elizabeth, TAPIA, Roxanne

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Genome Sequence of the Arctic Methanotroph Methylobacter tundripaludum SV96 von Svenning, Mette M, Hestnes, Anne Grethe, Wartiainen, Ingvild, Stein, Lisa Y, Klotz, Martin G, Kalyuzhnaya, Marina G, Spang, Anja, Bringel, Françoise, Vuilleumier, Stéphane, Lajus, Aurélie, Médigue, Claudine, Bruce, David C, Cheng, Jan-Fang, Goodwin, Lynne, Ivanova, Natalia, Han, James, Han, Cliff S, Hauser, Loren, Held, Brittany, Land, Miriam L, Lapidus, Alla, Lucas, Susan, Nolan, Matt, Pitluck, Sam, Woyke, Tanja

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Complete Genome Sequence and Updated Annotation of Desulfovibrio alaskensis G20 von HAUSER, Loren J, LAND, Miriam L, TAPIA, Roxanne, HAN, Cliff S, GOODWIN, Lynne A, CHENG, Jan-Fang, PITLUCK, Samuel, COPELAND, Alex, LUCAS, Susan, NOLAN, Matt, LAPIDUS, Alla L, PALUMBO, Anthony V, BROWN, Steven D, WALL, Judy D, LARIMER, Frank, KELLER, Kimberly L, RAPP-GILES, Barbara J, PRICE, Morgan N, LIN, Monica, BRUCE, David C, DETTER, John C

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Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae von Haley, Bradd J, Grim, Christopher J, Hasan, Nur A, Choi, Seon-Young, Chun, Jongsik, Brettin, Thomas S, Bruce, David C, Challacombe, Jean F, Detter, J Chris, Han, Cliff S, Huq, Anwar, Colwell, Rita R

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Complete Genome Sequence of the Thermophilic Bacterium Exiguobacterium sp. AT1b von VISHNIVETSKAYA, Tatiana A, LUCAS, Susan, SAUNDERS, E, BRETTIN, Tom, DETTER, Chris, HAN, Cliff, LARIMER, Frank, LAND, Miriam L, HAUSER, Loren J, KYRPIDES, Nikos C, OVCHINNIKOVA, Galina, KATHARIOU, Sophia, COPELAND, Alex, RAMALEY, Robert F, RODRIGUES, Debora F, HENDRIX, Christie, RICHARDSON, Paul, TIEDJE, James M, LAPIDUS, Alia, GLAVINA DEL RIO, Tijana, DALIN, E, TICE, Hope, BRUCE, David C, GOODWIN, Lynne A, PITLUCK, Sam

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A Horizontal Gene Transfer Event Defines Two Distinct Groups within Burkholderia pseudomallei That Have Dissimilar Geographic Distributions von TUANYOK, Apichai, AUERBACH, Raymond K, PEACOCK, Sharon J, CURRIE, Bart J, KEIM, Paul, WAGNER, David M, BRETTIN, Thomas S, BRUCE, David C, MUNK, A. Christine, DETTER, J. Chris, PEARSON, Talima, HORNSTRA, Heidie, SERMSWAN, Rasana W, WUTHIEKANUN, Vanaporn

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Genome Sequence of the Mercury-Methylating Strain Desulfovibrio desulfuricans ND132 von BROWN, Steven D, GILMOUR, Cynthia C, DETTER, John C, TAPIA, Roxanne, HAY, Cliff S, GOODWIN, Lynne A, CHENG, Jan-Fang, PITLUCK, Samuel, WOYKE, Tanja, MIKHAILOVA, Natalia, IVANOVA, Natalia N, HAN, James, KUCKEN, Amy M, LUCAS, Susan, LAPIDUS, Alla L, LAND, Miriam L, HAUSER, Loren J, PALUMBO, Anthony V, WALL, Judy D, ELIAS, Dwayne A, BRANDT, Craig C, PODAR, Mircea, CHERTKOV, Olga, HELD, Brittany, BRUCE, David C

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Comparative genomics of clinical and environmental Vibrio mimicus von Hasan, Nur A., Grim, Christopher J., Haley, Bradd J., Chun, Jongsik, Alam, Munirul, Taviani, Elisa, Hoq, Mozammel, Munk, A. Christine, Saunders, Elizabeth, Brettin, Thomas S., Bruce, David C., Challacombe, Jean F., Detter, J. Chris, Han, Cliff S., Xie, Gary, Nair, G. Balakrish, Huq, Anwar, Colwell, Rita R.

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Genome Sequence of the Methanotrophic Alphaproteobacterium Methylocystis sp. Strain Rockwell (ATCC 49242) von STEIN, Lisa Y, BRINGEL, Françoise, VUILLEUMIER, Stephane, BRUCE, David C, CHENG, Jan-Fang, DAVENPORT, Karen W, GOODWIN, Lynne, SHUNSHENG HAN, HAUSER, Loren, LAJUS, Aurélie, LAND, Miriam L, LAPIDUS, Alia, DISPIRITO, Alan A, LUCAS, Susan, MEDIGUE, Claudine, PITLUCK, Sam, WOYKE, Tanja, HAN, Sukkyun, JETTEN, Mike S. M, KALYUZHNAYA, Marina G, DIMITRI KITS, K, KLOTZ, Martin G, OP DEN CAMP, Huub J. M, SEMRAU, Jeremy D

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Genome analysis and physiological comparison of Alicycliphilus denitrificans strains BC and K601(T.) von Oosterkamp, Margreet J, Veuskens, Teun, Talarico Saia, Flávia, Weelink, Sander A B, Goodwin, Lynne A, Daligault, Hajnalka E, Bruce, David C, Detter, John C, Tapia, Roxanne, Han, Cliff S, Land, Miriam L, Hauser, Loren J, Langenhoff, Alette A M, Gerritse, Jan, van Berkel, Willem J H, Pieper, Dietmar H, Junca, Howard, Smidt, Hauke, Schraa, Gosse, Davids, Mark, Schaap, Peter J, Plugge, Caroline M, Stams, Alfons J M

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Complete Genome Sequence of the Cellulolytic Thermophile Caldicellulosiruptor obsidiansis OB47T von Elkins, James G, Lochner, Adriane, Hamilton-Brehm, Scott D, Davenport, Karen Walston, Podar, Mircea, Brown, Steven D, Land, Miriam L, Hauser, Loren J, Klingeman, Dawn M, Raman, Babu, Goodwin, Lynne A, Tapia, Roxanne, Meincke, Linda J, Detter, J Chris, Bruce, David C, Han, Cliff S, Palumbo, Anthony V, Cottingham, Robert W, Keller, Martin, Graham, David E

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Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34 von Anderson, Iain J, DasSarma, Priya, Lucas, Susan, Copeland, Alex, Lapidus, Alla, Del Rio, Tijana Glavina, Tice, Hope, Dalin, Eileen, Bruce, David C, Goodwin, Lynne, Pitluck, Sam, Sims, David, Brettin, Thomas S, Detter, John C, Han, Cliff S, Larimer, Frank, Hauser, Loren, Land, Miriam, Ivanova, Natalia, Richardson, Paul, Cavicchioli, Ricardo, DasSarma, Shiladitya, Woese, Carl R, Kyrpides, Nikos C

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