Illuminating the dark side of the human transcriptome with long read transcript sequencing von Kuo, Richard I, Cheng, Yuanyuan, Zhang, Runxuan, Brown, John W S, Smith, Jacqueline, Archibald, Alan L, Burt, David W

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A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing von Zhang, Runxuan, Calixto, Cristiane P G, Marquez, Yamile, Venhuizen, Peter, Tzioutziou, Nikoleta A, Guo, Wenbin, Spensley, Mark, Entizne, Juan Carlos, Lewandowska, Dominika, Ten Have, Sara, Frei Dit Frey, Nicolas, Hirt, Heribert, James, Allan B, Nimmo, Hugh G, Barta, Andrea, Kalyna, Maria, Brown, John W S

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Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis von Kalyna, Maria, Simpson, Craig G, Syed, Naeem H, Lewandowska, Dominika, Marquez, Yamile, Kusenda, Branislav, Marshall, Jacqueline, Fuller, John, Cardle, Linda, McNicol, Jim, Dinh, Huy Q, Barta, Andrea, Brown, John W S

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A methyl transferase links the circadian clock to the regulation of alternative splicing von Yanovsky, Marcelo J, Sanchez, Sabrina E, Petrillo, Ezequiel, Beckwith, Esteban J, Zhang, Xu, Rugnone, Matias L, Hernando, C. Esteban, Cuevas, Juan C, Godoy Herz, Micaela A, Depetris-Chauvin, Ana, Simpson, Craig G, Brown, John W. S, Cerdán, Pablo D, Borevitz, Justin O, Mas, Paloma, Ceriani, M. Fernanda, Kornblihtt, Alberto R

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Alternative Splicing of Barley Clock Genes in Response to Low Temperature von Calixto, Cristiane P G, Simpson, Craig G, Waugh, Robbie, Brown, John W S

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BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq von Rapazote-Flores, Paulo, Bayer, Micha, Milne, Linda, Mayer, Claus-Dieter, Fuller, John, Guo, Wenbin, Hedley, Pete E, Morris, Jenny, Halpin, Claire, Kam, Jason, McKim, Sarah M, Zwirek, Monika, Casao, M Cristina, Barakate, Abdellah, Schreiber, Miriam, Stephen, Gordon, Zhang, Runxuan, Brown, John W S, Waugh, Robbie, Simpson, Craig G

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spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms von Schlaen, Rubén Gustavo, Estefanéía Mancini, Sabrina Elena Sanchez, Soledad Perez-Santéíángelo, Matéíáías L. Rugnone, Craig G. Simpson, John W. S. Brown, Xu Zhang, Ariel Chernomoretz, Marcelo J. Yanovsky

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Evolutionary Relationships Among Barley and Arabidopsis Core Circadian Clock and Clock-Associated Genes von Calixto, Cristiane P. G., Waugh, Robbie, Brown, John W. S.

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High-quality reference transcript datasets hold the key to transcript-specific RNA-sequencing analysis in plants von Brown, John W. S., Calixto, Cristiane P. G., Zhang, Runxuan

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AtRTD – a comprehensive reference transcript dataset resource for accurate quantification of transcript-specific expression in Arabidopsis thaliana von Zhang, Runxuan, Calixto, Cristiane P. G., Tzioutziou, Nikoleta A., James, Allan B., Simpson, Craig G., Guo, Wenbin, Marquez, Yamile, Kalyna, Maria, Patro, Rob, Eyras, Eduardo, Barta, Andrea, Nimmo, Hugh G., Brown, John W. S.

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A Chloroplast Retrograde Signal Regulates Nuclear Alternative Splicing von Petrillo, Ezequiel, Herz, Micaela A. Godoy, Fuchs, Armin, Reifer, Dominik, Fuller, John, Yanovsky, Marcelo J., Simpson, Craig, Brown, John W. S., Barta, Andrea, Kalyna, Maria, Kornblihtt, Alberto R.

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Monitoring changes in alternative precursor messenger RNA splicing in multiple gene transcripts von Simpson, Craig G, Fuller, John, Maronova, Monika, Kalyna, Maria, Davidson, Diane, McNicol, Jim, Barta, Andrea, Brown, John W.S

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Plant SILAC: stable-isotope labelling with amino acids of arabidopsis seedlings for quantitative proteomics von Lewandowska, Dominika, ten Have, Sara, Hodge, Kelly, Tillemans, Vinciane, Lamond, Angus I, Brown, John W S

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Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana von Raczynska, Katarzyna Dorota, Simpson, Craig G, Ciesiolka, Adam, Szewc, Lukasz, Lewandowska, Dominika, McNicol, Jim, Szweykowska-Kulinska, Zofia, Brown, John W S, Jarmolowski, Artur

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Interaction of a Plant Virus-Encoded Protein with the Major Nucleolar Protein Fibrillarin Is Required for Systemic Virus Infection von Kim, Sang Hyon, MacFarlane, Stuart, Kalinina, Natalia O., Rakitina, Daria V., Ryabov, Eugene V., Gillespie, Trudi, Haupt, Sophie, Brown, John W. S., Taliansky, Michael

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Alternative splicing in plants – coming of age von Syed, Naeem H, Kalyna, Maria, Marquez, Yamile, Barta, Andrea, Brown, John W.S

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Pathogenicity, tissue distribution, shedding and environmental detection of two strains of IBDV following infection of chickens at 0 and 14 days of age von Jayasundara, J. M. K. G. K., Walkden-Brown, S. W., Katz, M. E., Islam, A. F. M. F., Renz, K. G., McNally, J., Hunt, P. W.

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Arabidopsis PTB1 and PTB2 proteins negatively regulate splicing of a mini‐exon splicing reporter and affect alternative splicing of endogenous genes differentially von Simpson, Craig G, Lewandowska, Dominika, Liney, Michele, Davidson, Diane, Chapman, Sean, Fuller, John, McNicol, Jim, Shaw, Paul, Brown, John W. S

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Cajal bodies and the nucleolus are required for a plant virus systemic infection von Kim, Sang Hyon, Ryabov, Eugene V, Kalinina, Natalia O, Rakitina, Daria V, Gillespie, Trudi, MacFarlane, Stuart, Haupt, Sophie, Brown, John WS, Taliansky, Michael

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A cost‐benefit analysis of foot and mouth disease control program for smallholder cattle farmers in Cambodia von Sieng, S., Patrick, I. W., Walkden‐Brown, S.W., Sar, C.

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