How open science helps researchers succeed von McKiernan, Erin C, Bourne, Philip E, Brown, C Titus, Buck, Stuart, Kenall, Amye, Lin, Jennifer, McDougall, Damon, Nosek, Brian A, Ram, Karthik, Soderberg, Courtney K, Spies, Jeffrey R, Thaney, Kaitlin, Updegrove, Andrew, Woo, Kara H, Yarkoni, Tal

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Large-scale sequence comparisons with sourmash [version 1; peer review: 2 approved] von Pierce, N. Tessa, Irber, Luiz, Reiter, Taylor, Brooks, Phillip, Brown, C. Titus

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Evaluation of taxonomic classification and profiling methods for long-read shotgun metagenomic sequencing datasets von Portik, Daniel M, Brown, C Titus, Pierce-Ward, N Tessa

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Ribosomal Database Project: data and tools for high throughput rRNA analysis von Cole, James R, Wang, Qiong, Fish, Jordan A, Chai, Benli, McGarrell, Donna M, Sun, Yanni, Brown, C Titus, Porras-Alfaro, Andrea, Kuske, Cheryl R, Tiedje, James M

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FunGene: the functional gene pipeline and repository von Fish, Jordan A, Chai, Benli, Wang, Qiong, Sun, Yanni, Brown, C Titus, Tiedje, James M, Cole, James R

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A phylogenetically novel cyanobacterium most closely related to Gloeobacter von Grettenberger, Christen L., Sumner, Dawn Y., Wall, Kate, Brown, C. Titus, Eisen, Jonathan A., Mackey, Tyler J., Hawes, Ian, Jospin, Guillaume, Jungblut, Anne D.

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Tackling soil diversity with the assembly of large, complex metagenomes von Howe, Adina Chuang, Jansson, Janet K., Malfatti, Stephanie A., Tringe, Susannah G., Tiedje, James M., Brown, C. Titus

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Best practices for scientific computing von Wilson, Greg, Aruliah, D A, Brown, C Titus, Chue Hong, Neil P, Davis, Matt, Guy, Richard T, Haddock, Steven H D, Huff, Kathryn D, Mitchell, Ian M, Plumbley, Mark D, Waugh, Ben, White, Ethan P, Wilson, Paul

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Centromere location in Arabidopsis is unaltered by extreme divergence in CENH3 protein sequence von Maheshwari, Shamoni, Ishii, Takayoshi, Brown, C Titus, Houben, Andreas, Comai, Luca

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Genomic and phenotypic analyses of six offspring of a genome-edited hornless bull von Young, Amy E., Mansour, Tamer A., McNabb, Bret R., Owen, Joseph R., Trott, Josephine F., Brown, C. Titus, Van Eenennaam, Alison L.

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Microbial Community Analysis with Ribosomal Gene Fragments from Shotgun Metagenomes von Guo, Jiarong, Cole, James R, Zhang, Qingpeng, Brown, C Titus, Tiedje, James M

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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs von Pell, Jason, Hintze, Arend, Canino-Koning, Rosangela, Howe, Adina, Tiedje, James M, Brown, C. Titus

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Microbial metabolites in the marine carbon cycle von Moran, Mary Ann, Kujawinski, Elizabeth B., Schroer, William F., Amin, Shady A., Bates, Nicholas R., Bertrand, Erin M., Braakman, Rogier, Brown, C. Titus, Covert, Markus W., Doney, Scott C., Dyhrman, Sonya T., Edison, Arthur S., Eren, A. Murat, Levine, Naomi M., Li, Liang, Ross, Avena C., Saito, Mak A., Santoro, Alyson E., Segrè, Daniel, Shade, Ashley, Sullivan, Matthew B., Vardi, Assaf

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Xander: employing a novel method for efficient gene-targeted metagenomic assembly von Wang, Qiong, Fish, Jordan A, Gilman, Mariah, Sun, Yanni, Brown, C Titus, Tiedje, James M, Cole, James R

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These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure von Zhang, Qingpeng, Pell, Jason, Canino-Koning, Rosangela, Howe, Adina Chuang, Brown, C Titus

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Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes von Johnson, Lisa K, Alexander, Harriet, Brown, C Titus

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MQF and buffered MQF: quotient filters for efficient storage of k-mers with their counts and metadata von Shokrof, Moustafa, Brown, C Titus, Mansour, Tamer A

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Exploring neighborhoods in large metagenome assembly graphs using spacegraphcats reveals hidden sequence diversity von Brown, C Titus, Moritz, Dominik, O'Brien, Michael P, Reidl, Felix, Reiter, Taylor, Sullivan, Blair D

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Genomic characterization of a diazotrophic microbiota associated with maize aerial root mucilage von Higdon, Shawn M, Pozzo, Tania, Kong, Nguyet, Huang, Bihua C, Yang, Mai Lee, Jeannotte, Richard, Brown, C. Titus, Bennett, Alan B, Weimer, Bart C

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Whole genome sequencing for mutation discovery in a single case of lysosomal storage disease (MPS type 1) in the dog von Mansour, Tamer A., Woolard, Kevin D., Vernau, Karen L., Ancona, Devin M., Thomasy, Sara M., Sebbag, Lionel, Moore, Bret A., Knipe, Marguerite F., Seada, Haitham A., Cowan, Tina M., Aguilar, Miriam, Titus Brown, C., Bannasch, Danika L.

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