Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods von Haas, Brian J, Dobin, Alexander, Li, Bo, Stransky, Nicolas, Pochet, Nathalie, Regev, Aviv

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How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes? von Haas, Brian J, Chin, Melissa, Nusbaum, Chad, Birren, Bruce W, Livny, Jonathan

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UCHIME improves sensitivity and speed of chimera detection von Edgar, Robert C., Haas, Brian J., Clemente, Jose C., Quince, Christopher, Knight, Rob

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Comparison of tomosynthesis plus digital mammography and digital mammography alone for breast cancer screening von Haas, Brian M, Kalra, Vivek, Geisel, Jaime, Raghu, Madhavi, Durand, Melissa, Philpotts, Liane E

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Editorial Comment: Report Extent of Consolidation and Pulmonary Artery Diameter in Patients With Interstitial Lung Disease Who Are Undergoing an Initial Evaluation of Lung Cancer von Haas, Brian M

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A Regression-Based Analysis of Ribosome-Profiling Data Reveals a Conserved Complexity to Mammalian Translation von Fields, Alexander P., Rodriguez, Edwin H., Jovanovic, Marko, Stern-Ginossar, Noam, Haas, Brian J., Mertins, Philipp, Raychowdhury, Raktima, Hacohen, Nir, Carr, Steven A., Ingolia, Nicholas T., Regev, Aviv, Weissman, Jonathan S.

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Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells von Kowalczyk, Monika S, Tirosh, Itay, Heckl, Dirk, Rao, Tata Nageswara, Dixit, Atray, Haas, Brian J, Schneider, Rebekka K, Wagers, Amy J, Ebert, Benjamin L, Regev, Aviv

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De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis von Haas, Brian J, Papanicolaou, Alexie, Yassour, Moran, Grabherr, Manfred, Blood, Philip D, Bowden, Joshua, Couger, Matthew Brian, Eccles, David, Li, Bo, Lieber, Matthias, MacManes, Matthew D, Ott, Michael, Orvis, Joshua, Pochet, Nathalie, Strozzi, Francesco, Weeks, Nathan, Westerman, Rick, William, Thomas, Dewey, Colin N, Henschel, Robert, LeDuc, Richard D, Friedman, Nir, Regev, Aviv

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Cultural Differences in Susceptibility to the End of History Illusion von Haas, Brian W., Omura, Kazufumi

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The role of culture on the link between worldviews on nature and psychological health during the COVID-19 pandemic von Haas, Brian W., Hoeft, Fumiko, Omura, Kazufumi

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A Tissue-Mapped Axolotl De Novo Transcriptome Enables Identification of Limb Regeneration Factors von Bryant, Donald M., Johnson, Kimberly, DiTommaso, Tia, Tickle, Timothy, Couger, Matthew Brian, Payzin-Dogru, Duygu, Lee, Tae J., Leigh, Nicholas D., Kuo, Tzu-Hsing, Davis, Francis G., Bateman, Joel, Bryant, Sevara, Guzikowski, Anna R., Tsai, Stephanie L., Coyne, Steven, Ye, William W., Freeman, Robert M., Peshkin, Leonid, Tabin, Clifford J., Regev, Aviv, Haas, Brian J., Whited, Jessica L.

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Advances in Decoding Axolotl Limb Regeneration von Haas, Brian J., Whited, Jessica L.

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Inhibition of the Sodium-Potassium-Chloride Cotransporter Isoform-1 Reduces Glioma Invasion von HAAS, Brian R, SONTHEIMER, Harald

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Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons von Haas, Brian J, Gevers, Dirk, Earl, Ashlee M, Feldgarden, Mike, Ward, Doyle V, Giannoukos, Georgia, Ciulla, Dawn, Tabbaa, Diana, Highlander, Sarah K, Sodergren, Erica, Methé, Barbara, DeSantis, Todd Z, Petrosino, Joseph F, Knight, Rob, Birren, Bruce W

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Glutamate release by primary brain tumors induces epileptic activity von Buckingham, Susan C, Campbell, Susan L, Haas, Brian R, Montana, Vedrana, Robel, Stefanie, Ogunrinu, Toyin, Sontheimer, Harald

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Full-length transcriptome assembly from RNA-Seq data without a reference genome von Friedman, Nir, Regev, Aviv, Grabherr, Manfred G, Haas, Brian J, Yassour, Moran, Levin, Joshua Z, Thompson, Dawn A, Amit, Ido, Adiconis, Xian, Fan, Lin, Raychowdhury, Raktima, Zeng, Qiandong, Chen, Zehua, Mauceli, Evan, Hacohen, Nir, Gnirke, Andreas, Rhind, Nicholas, di Palma, Federica, Birren, Bruce W, Nusbaum, Chad, Lindblad-Toh, Kerstin

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Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes von Giannoukos, Georgia, Ciulla, Dawn M, Huang, Katherine, Haas, Brian J, Izard, Jacques, Levin, Joshua Z, Livny, Jonathan, Earl, Ashlee M, Gevers, Dirk, Ward, Doyle V, Nusbaum, Chad, Birren, Bruce W, Gnirke, Andreas

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A new empirical framework to measure beliefs about the future well‐being of all humanity von Lou, Xiaobin, Haas, Brian W.

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Transcriptomic landscape of the blastema niche in regenerating adult axolotl limbs at single-cell resolution von Leigh, Nicholas D., Dunlap, Garrett S., Johnson, Kimberly, Mariano, Rachelle, Oshiro, Rachel, Wong, Alan Y., Bryant, Donald M., Miller, Bess M., Ratner, Alex, Chen, Andy, Ye, William W., Haas, Brian J., Whited, Jessica L.

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Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments von Haas, Brian J, Salzberg, Steven L, Zhu, Wei, Pertea, Mihaela, Allen, Jonathan E, Orvis, Joshua, White, Owen, Buell, C Robin, Wortman, Jennifer R

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