Maturation of the gut microbiome and risk of asthma in childhood von Stokholm, Jakob, Blaser, Martin J., Thorsen, Jonathan, Rasmussen, Morten A., Waage, Johannes, Vinding, Rebecca K., Schoos, Ann-Marie M., Kunøe, Asja, Fink, Nadia R., Chawes, Bo L., Bønnelykke, Klaus, Brejnrod, Asker D., Mortensen, Martin S., Al-Soud, Waleed Abu, Sørensen, Søren J., Bisgaard, Hans

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Eosinophilic airway inflammation in asthmatic patients is associated with an altered airway microbiome von Sverrild, Asger, MD, PhD, Kiilerich, Pia, MSc, PhD, Brejnrod, Asker, MSc, Pedersen, Rebecca, MSc, PhD, Porsbjerg, Celeste, MD, PhD, Bergqvist, Anders, MSc, Erjefält, Jonas S., MSc, PhD, Kristiansen, Karsten, MSc, Backer, Vibeke, MD, DMSc

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Community-intrinsic properties enhance keratin degradation from bacterial consortia von Nasipuri, Poonam, Herschend, Jakob, Brejnrod, Asker D., Madsen, Jonas S., Espersen, Roall, Svensson, Birte, Burmolle, Mette, Jacquiod, Samuel, Sorensen, Soren J.

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Deciphering links between bacterial interactions and spatial organization in multispecies biofilms von Liu, Wenzheng, Jacquiod, Samuel, Brejnrod, Asker, Russel, Jakob, Burmølle, Mette, Sørensen, Søren J.

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Infant airway microbiota and topical immune perturbations in the origins of childhood asthma von Thorsen, Jonathan, Rasmussen, Morten A., Waage, Johannes, Mortensen, Martin, Brejnrod, Asker, Bønnelykke, Klaus, Chawes, Bo L., Brix, Susanne, Sørensen, Søren J., Stokholm, Jakob, Bisgaard, Hans

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Modeling transfer of vaginal microbiota from mother to infant in early life von Mortensen, Martin Steen, Rasmussen, Morten Arendt, Stokholm, Jakob, Brejnrod, Asker Daniel, Balle, Christina, Thorsen, Jonathan, Krogfelt, Karen Angeliki, Bisgaard, Hans, Sorensen, Soren Johannes

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Chemically informed analyses of metabolomics mass spectrometry data with Qemistree von Tripathi, Anupriya, Vázquez-Baeza, Yoshiki, Gauglitz, Julia M., Wang, Mingxun, Dührkop, Kai, Nothias-Esposito, Mélissa, Acharya, Deepa D., Ernst, Madeleine, van der Hooft, Justin J. J., Zhu, Qiyun, McDonald, Daniel, Brejnrod, Asker D., Gonzalez, Antonio, Handelsman, Jo, Fleischauer, Markus, Ludwig, Marcus, Böcker, Sebastian, Nothias, Louis-Félix, Knight, Rob, Dorrestein, Pieter C.

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Coping with copper: legacy effect of copper on potential activity of soil bacteria following a century of exposure von Nunes, Inês, Jacquiod, Samuel, Brejnrod, Asker, Holm, Peter E., Johansen, Anders, Brandt, Kristian K., Priemé, Anders, Sørensen, Søren J.

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Genetic barcoding of dark‐spored myxomycetes (Amoebozoa)—Identification, evaluation and application of a sequence similarity threshold for species differentiation in NGS studies... von Borg Dahl, Mathilde, Brejnrod, Asker D., Unterseher, Martin, Hoppe, Thomas, Feng, Yun, Novozhilov, Yuri, Sørensen, Søren J., Schnittler, Martin

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Prenatal dietary supplements influence the infant airway microbiota in a randomized factorial clinical trial von Hjelmsø, Mathis H., Shah, Shiraz A., Thorsen, Jonathan, Rasmussen, Morten, Vestergaard, Gisle, Mortensen, Martin S., Brejnrod, Asker, Brix, Susanne, Chawes, Bo, Bønnelykke, Klaus, Sørensen, Søren J., Stokholm, Jakob, Bisgaard, Hans

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Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies von Thorsen, Jonathan, Brejnrod, Asker, Mortensen, Martin, Rasmussen, Morten A, Stokholm, Jakob, Al-Soud, Waleed Abu, Sørensen, Søren, Bisgaard, Hans, Waage, Johannes

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Differential responses of the gut microbiome and resistome to antibiotic exposures in infants and adults von Li, Xuanji, Brejnrod, Asker, Thorsen, Jonathan, Zachariasen, Trine, Trivedi, Urvish, Russel, Jakob, Vestergaard, Gisle Alberg, Stokholm, Jakob, Rasmussen, Morten Arendt, Sørensen, Søren Johannes

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Deciphering conjugative plasmid permissiveness in wastewater microbiomes von Jacquiod, Samuel, Brejnrod, Asker, Morberg, Stefan M., Abu Al‐Soud, Waleed, Sørensen, Søren J., Riber, Leise

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Heavy metal exposure causes changes in the metabolic health-associated gut microbiome and metabolites von Li, Xuanji, Brejnrod, Asker Daniel, Ernst, Madeleine, Rykær, Martin, Herschend, Jakob, Olsen, Nanna Mee Coops, Dorrestein, Pieter C., Rensing, Christopher, Sørensen, Søren Johannes

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Legacy Effects on the Recovery of Soil Bacterial Communities from Extreme Temperature Perturbation von Jurburg, Stephanie D, Nunes, Inês, Brejnrod, Asker, Jacquiod, Samuel, Priemé, Anders, Sørensen, Søren J, Van Elsas, Jan Dirk, Salles, Joana F

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Metagenomic evidence for co-occurrence of antibiotic, biocide and metal resistance genes in pigs von Li, Xuanji, Rensing, Christopher, Vestergaard, Gisle, Arumugam, Manimozhiyan, Nesme, Joseph, Gupta, Shashank, Brejnrod, Asker Daniel, Sørensen, Søren Johannes

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Warming, shading and a moth outbreak reduce tundra carbon sink strength dramatically by changing plant cover and soil microbial activity von Dahl, Mathilde Borg, Priemé, Anders, Brejnrod, Asker, Brusvang, Peter, Lund, Magnus, Nymand, Josephine, Kramshøj, Magnus, Ro-Poulsen, Helge, Haugwitz, Merian Skouw

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MAGinator enables accurate profiling of de novo MAGs with strain-level phylogenies von Zachariasen, Trine, Russel, Jakob, Petersen, Charisse, Vestergaard, Gisle A., Shah, Shiraz, Atienza Lopez, Pablo, Passali, Moschoula, Turvey, Stuart E., Sørensen, Søren J., Lund, Ole, Stokholm, Jakob, Brejnrod, Asker, Thorsen, Jonathan

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Soil bacteria show different tolerance ranges to an unprecedented disturbance von Nunes, Inês, Jurburg, Stephanie, Jacquiod, Samuel, Brejnrod, Asker, Falcão Salles, Joana, Priemé, Anders, Sørensen, Søren J.

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Community structure of the metabolically active rumen bacterial and archaeal communities of dairy cows over the transition period von Zhu, Zhigang, Noel, Samantha Joan, Difford, Gareth Frank, Al-Soud, Waleed Abu, Brejnrod, Asker, Sørensen, Søren Johannes, Lassen, Jan, Løvendahl, Peter, Højberg, Ole

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