Multiple Origins of Virus Persistence during Natural Control of HIV Infection von Boritz, Eli A., Darko, Samuel, Swaszek, Luke, Wolf, Gideon, Wells, David, Wu, Xiaolin, Henry, Amy R., Laboune, Farida, Hu, Jianfei, Ambrozak, David, Hughes, Marybeth S., Hoh, Rebecca, Casazza, Joseph P., Vostal, Alexander, Bunis, Daniel, Nganou-Makamdop, Krystelle, Lee, James S., Migueles, Stephen A., Koup, Richard A., Connors, Mark, Moir, Susan, Schacker, Timothy, Maldarelli, Frank, Hughes, Stephen H., Deeks, Steven G., Douek, Daniel C.

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Identification of Genetically Intact HIV-1 Proviruses in Specific CD4+ T Cells from Effectively Treated Participants von Hiener, Bonnie, Horsburgh, Bethany A., Eden, John-Sebastian, Barton, Kirston, Schlub, Timothy E., Lee, Eunok, von Stockenstrom, Susanne, Odevall, Lina, Milush, Jeffrey M., Liegler, Teri, Sinclair, Elizabeth, Hoh, Rebecca, Boritz, Eli A., Douek, Daniel, Fromentin, Rémi, Chomont, Nicolas, Deeks, Steven G., Hecht, Frederick M., Palmer, Sarah

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Identification of astrocyte regulators by nucleic acid cytometry von Clark, Iain C., Wheeler, Michael A., Lee, Hong-Gyun, Li, Zhaorong, Sanmarco, Liliana M., Thaploo, Shravan, Polonio, Carolina M., Shin, Seung Won, Scalisi, Giulia, Henry, Amy R., Rone, Joseph M., Giovannoni, Federico, Charabati, Marc, Akl, Camilo Faust, Aleman, Dulce M., Zandee, Stephanie E. J., Prat, Alexandre, Douek, Daniel C., Boritz, Eli A., Quintana, Francisco J., Abate, Adam R.

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High-throughput, single-copy sequencing reveals SARS-CoV-2 spike variants coincident with mounting humoral immunity during acute COVID-19 von Ko, Sung Hee, Bayat Mokhtari, Elham, Mudvari, Prakriti, Stein, Sydney, Stringham, Christopher D, Wagner, Danielle, Ramelli, Sabrina, Ramos-Benitez, Marcos J, Strich, Jeffrey R, Davey, Jr, Richard T, Zhou, Tongqing, Misasi, John, Kwong, Peter D, Chertow, Daniel S, Sullivan, Nancy J, Boritz, Eli A

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Fc-mediated effector function contributes to the in vivo antiviral effect of an HIV neutralizing antibody von Asokan, Mangaiarkarasi, Dias, Joana, Liu, Cuiping, Maximova, Anna, Ernste, Keenan, Pegu, Amarendra, McKee, Krisha, Shi, Wei, Chen, Xuejun, Almasri, Cassandra, Promsote, Wanwisa, Ambrozak, David R., Gama, Lucio, Hu, Jianfei, Douek, Daniel C., Todd, John-Paul, Lifson, Jeffrey D., Fourati, Slim, Sekaly, Rafick P., Crowley, Andrew R., Ackerman, Margaret E., Ko, Sung Hee, Kilam, Divya, Boritz, Eli A., Liao, Laura E., Best, Katharine, Perelson, Alan S., Mascola, John R., Koup, Richard A.

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The role of CD101-expressing CD4 T cells in HIV/SIV pathogenesis and persistence von Strongin, Zachary, Hoang, Timothy N, Tharp, Gregory K, Rahmberg, Andrew R, Harper, Justin L, Nguyen, Kevin, Franchitti, Lavinia, Cervasi, Barbara, Lee, Max, Zhang, Zhan, Boritz, Eli A, Silvestri, Guido, Marconi, Vincent C, Bosinger, Steven E, Brenchley, Jason M, Kulpa, Deanna A, Paiardini, Mirko

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HIV silencing and cell survival signatures in infected T cell reservoirs von Clark, Iain C., Mudvari, Prakriti, Thaploo, Shravan, Smith, Samuel, Abu-Laban, Mohammad, Hamouda, Mehdi, Theberge, Marc, Shah, Sakshi, Ko, Sung Hee, Pérez, Liliana, Bunis, Daniel G., Lee, James S., Kilam, Divya, Zakaria, Saami, Choi, Sally, Darko, Samuel, Henry, Amy R., Wheeler, Michael A., Hoh, Rebecca, Butrus, Salwan, Deeks, Steven G., Quintana, Francisco J., Douek, Daniel C., Abate, Adam R., Boritz, Eli A.

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Rapid intra-host diversification and evolution of SARS-CoV-2 in advanced HIV infection von Ko, Sung Hee, Radecki, Pierce, Belinky, Frida, Bhiman, Jinal N., Meiring, Susan, Kleynhans, Jackie, Amoako, Daniel, Guerra Canedo, Vanessa, Lucas, Margaret, Kekana, Dikeledi, Martinson, Neil, Lebina, Limakatso, Everatt, Josie, Tempia, Stefano, Bylund, Tatsiana, Rawi, Reda, Kwong, Peter D., Wolter, Nicole, von Gottberg, Anne, Cohen, Cheryl, Boritz, Eli A.

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Perspectives on Human Immunodeficiency Virus (HIV) Cure: HIV Persistence in Tissue von Boritz, Eli A., Douek, Daniel C.

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FIND-seq: high-throughput nucleic acid cytometry for rare single-cell transcriptomics von Shin, Seung Won, Mudvari, Prakriti, Thaploo, Shravan, Wheeler, Michael A., Douek, Daniel C., Quintana, Francisco J., Boritz, Eli A., Abate, Adam R., Clark, Iain C.

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High levels of genetically intact HIV in HLA-DR+ memory T cells indicates their value for reservoir studies von Horsburgh, Bethany A., Lee, Eunok, Hiener, Bonnie, Eden, John-Sebastian, Schlub, Timothy E., von Stockenstrom, Susanne, Odevall, Lina, Milush, Jeffrey M., Liegler, Teri, Sinclair, Elizabeth, Hoh, Rebecca, Boritz, Eli A., Douek, Daniel C., Fromentin, Remi, Chomont, Nicolas, Deeks, Steven G., Hecht, Frederick M., Palmer, Sarah

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mRNA-1273 protects against SARS-CoV-2 beta infection in nonhuman primates von Corbett, Kizzmekia S., Werner, Anne P., Connell, Sarah O’, Gagne, Matthew, Lai, Lilin, Moliva, Juan I., Flynn, Barbara, Choi, Angela, Koch, Matthew, Foulds, Kathryn E., Andrew, Shayne F., Flebbe, Dillon R., Lamb, Evan, Nurmukhambetova, Saule T., Provost, Samantha J., Bock, Kevin W., Minai, Mahnaz, Nagata, Bianca M., Ry, Alex Van, Flinchbaugh, Zackery, Johnston, Timothy S., Mokhtari, Elham Bayat, Mudvari, Prakriti, Henry, Amy R., Laboune, Farida, Chang, Becky, Porto, Maciel, Wear, Jaclyn, Alvarado, Gabriela S., Boyoglu-Barnum, Seyhan, Todd, John-Paul M., Bart, Bridget, Cook, Anthony, Dodson, Alan, Pessaint, Laurent, Steingrebe, Katelyn, Elbashir, Sayda, Sriparna, Manjari, Pekosz, Andrew, Andersen, Hanne, Wu, Kai, Edwards, Darin K., Kar, Swagata, Lewis, Mark G., Boritz, Eli, Moore, Ian N., Carfi, Andrea, Suthar, Mehul S., McDermott, Adrian, Roederer, Mario, Nason, Martha C., Sullivan, Nancy J., Douek, Daniel C., Graham, Barney S., Seder, Robert A.

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Challenges in detecting HIV persistence during potentially curative interventions: a study of the Berlin patient von Yukl, Steven A, Boritz, Eli, Busch, Michael, Bentsen, Christopher, Chun, Tae-Wook, Douek, Daniel, Eisele, Evelyn, Haase, Ashley, Ho, Ya-Chi, Hütter, Gero, Justement, J Shawn, Keating, Sheila, Lee, Tzong-Hae, Li, Peilin, Murray, Danielle, Palmer, Sarah, Pilcher, Christopher, Pillai, Satish, Price, Richard W, Rothenberger, Meghan, Schacker, Timothy, Siliciano, Janet, Siliciano, Robert, Sinclair, Elizabeth, Strain, Matt, Wong, Joseph, Richman, Douglas, Deeks, Steven G

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Conflicting evidence for HIV enrichment in CD32+ CD4 T cells von Pérez, Liliana, Anderson, Jodi, Chipman, Jeffrey, Thorkelson, Ann, Chun, Tae-Wook, Moir, Susan, Haase, Ashley T., Douek, Daniel C., Schacker, Timothy W., Boritz, Eli A.

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Loss of circulating CD4 T cells with B cell helper function during chronic HIV infection von Boswell, Kristin L, Paris, Robert, Boritz, Eli, Ambrozak, David, Yamamoto, Takuya, Darko, Sam, Wloka, Kaska, Wheatley, Adam, Narpala, Sandeep, McDermott, Adrian, Roederer, Mario, Haubrich, Richard, Connors, Mark, Ake, Julie, Douek, Daniel C, Kim, Jerome, Petrovas, Constantinos, Koup, Richard A

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Pre-exposure antibody prophylaxis protects macaques from severe influenza von Kanekiyo, Masaru, Gillespie, Rebecca A, Cooper, Kristine, Canedo, Vanessa Guerra, Castanha, Priscila M S, Pegu, Amarendra, Yang, Eun Sung, Treaster, Luke, Yun, Gabin, Wallace, Megan, Kettenburg, Gwenddolen, Williams, Connor, Lundy, Jeneveve, Barrick, Stacey, O'Malley, Katherine, Midgett, Morgan, Martí, Michelle M, Chavva, Hasitha, Corry, Jacqueline, Treat, Benjamin R, Lipinski, Abby, Batsche, Lucia Ortiz, Creanga, Adrian, Ritter, Isabella, Walker, Reagan, Olsen, Emily, Laughlin, Amanda, Perez, Daniel R, Mascola, John R, Boritz, Eli A, Loo, Yueh-Ming, Blair, Wade, Esser, Mark, Graham, Barney S, Reed, Douglas S, Barratt-Boyes, Simon M

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Memory CD4 + T-Cells Expressing HLA-DR Contribute to HIV Persistence During Prolonged Antiretroviral Therapy von Lee, Eunok, Bacchetti, Peter, Milush, Jeffery, Shao, Wei, Boritz, Eli, Douek, Daniel, Fromentin, Remi, Liegler, Teri, Hoh, Rebecca, Deeks, Steve G, Hecht, Frederick M, Chomont, Nicolas, Palmer, Sarah

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Droplet-microfluidics-assisted sequencing of HIV proviruses and their integration sites in cells from people on antiretroviral therapy von Sun, Chen, Liu, Leqian, Pérez, Liliana, Li, Xiangpeng, Liu, Yifan, Xu, Peng, Boritz, Eli A., Mullins, James I., Abate, Adam R.

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Stochastic principles governing alternative splicing of RNA von Hu, Jianfei, Boritz, Eli, Wylie, William, Douek, Daniel C

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Immune activation and exhaustion marker expression on T-cell subsets in ART-treated adolescents and young adults with perinatal HIV-1 infection as correlates of viral persistence von Huang, Yuyang, Dhummakupt, Adit, Khetan, Priya, Nilles, Tricia, Zhou, Weiqiang, Mudvari, Prakriti, Szewczyk, Joseph, Chen, Ya Hui, Boritz, Eli, Ji, Hongkai, Agwu, Allison, Persaud, Deborah

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