minet: A R/Bioconductor package for inferring large transcriptional networks using mutual information von Meyer, Patrick E, Lafitte, Frédéric, Bontempi, Gianluca

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A review and comparison of strategies for multi-step ahead time series forecasting based on the NN5 forecasting competition von Ben Taieb, Souhaib, Bontempi, Gianluca, Atiya, Amir F., Sorjamaa, Antti

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TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data von Colaprico, Antonio, Silva, Tiago C, Olsen, Catharina, Garofano, Luciano, Cava, Claudia, Garolini, Davide, Sabedot, Thais S, Malta, Tathiane M, Pagnotta, Stefano M, Castiglioni, Isabella, Ceccarelli, Michele, Bontempi, Gianluca, Noushmehr, Houtan

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CancerSubtypes: an R/Bioconductor package for molecular cancer subtype identification, validation and visualization von Xu, Taosheng, Le, Thuc Duy, Liu, Lin, Su, Ning, Wang, Rujing, Sun, Bingyu, Colaprico, Antonio, Bontempi, Gianluca, Li, Jiuyong

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New functionalities in the TCGAbiolinks package for the study and integration of cancer data from GDC and GTEx von Mounir, Mohamed, Lucchetta, Marta, Silva, Tiago C, Olsen, Catharina, Bontempi, Gianluca, Chen, Xi, Noushmehr, Houtan, Colaprico, Antonio, Papaleo, Elena

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Learned lessons in credit card fraud detection from a practitioner perspective von Dal Pozzolo, Andrea, Caelen, Olivier, Le Borgne, Yann-Aël, Waterschoot, Serge, Bontempi, Gianluca

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TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages [version 2; peer review: 1 approved, 2 approved with reservations] von Silva, Tiago C, Colaprico, Antonio, Olsen, Catharina, D'Angelo, Fulvio, Bontempi, Gianluca, Ceccarelli, Michele, Noushmehr, Houtan

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Extraction and analysis of flow features in planar synthetic jets using different machine learning techniques von Muñoz, Eva, Dave, Himanshu, D'Alessio, Giuseppe, Bontempi, Gianluca, Parente, Alessandro, Le Clainche, Soledad

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A Three-Gene Model to Robustly Identify Breast Cancer Molecular Subtypes von Haibe-Kains, Benjamin, Desmedt, Christine, Loi, Sherene, Culhane, Aedin C., Bontempi, Gianluca, Quackenbush, John, Sotiriou, Christos

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Biological Processes Associated with Breast Cancer Clinical Outcome Depend on the Molecular Subtypes von DESMEDT, Christine, HAIBE-KAINS, Benjamin, WIRAPATI, Pratyaksha, BUYSE, Marc, LARSIMONT, Denis, BONTEMPI, Gianluca, DELORENZI, Mauro, PICCART, Martine, SOTIRIOU, Christos

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Interpreting pathways to discover cancer driver genes with Moonlight von Colaprico, Antonio, Olsen, Catharina, Bailey, Matthew H., Odom, Gabriel J., Terkelsen, Thilde, Silva, Tiago C., Olsen, André V., Cantini, Laura, Zinovyev, Andrei, Barillot, Emmanuel, Noushmehr, Houtan, Bertoli, Gloria, Castiglioni, Isabella, Cava, Claudia, Bontempi, Gianluca, Chen, Xi Steven, Papaleo, Elena

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Integration of multiple networks and pathways identifies cancer driver genes in pan-cancer analysis von Cava, Claudia, Bertoli, Gloria, Colaprico, Antonio, Olsen, Catharina, Bontempi, Gianluca, Castiglioni, Isabella

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Information-Theoretic Feature Selection in Microarray Data Using Variable Complementarity von Meyer, P.E., Schretter, C., Bontempi, G.

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AST-MTL: An Attention-Based Multi-Task Learning Strategy for Traffic Forecasting von Buroni, Giovanni, Lebichot, Bertrand, Bontempi, Gianluca

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Riemannian classification of single-trial surface EEG and sources during checkerboard and navigational images in humans von Simar, Cédric, Petit, Robin, Bozga, Nichita, Leroy, Axelle, Cebolla, Ana-Maria, Petieau, Mathieu, Bontempi, Gianluca, Cheron, Guy

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Factor-Based Framework for Multivariate and Multi-step-ahead Forecasting of Large Scale Time Series von De Stefani, Jacopo, Bontempi, Gianluca

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On the Use of Variable Complementarity for Feature Selection in Cancer Classification von Meyer, Patrick E., Bontempi, Gianluca

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Definition of Clinically Distinct Molecular Subtypes in Estrogen Receptor–Positive Breast Carcinomas Through Genomic Grade von LOI, Sherene, HAIBE-KAINS, Benjamin, KLIJN, Jan G. M, LARSIMONT, Denis, BUYSE, Marc, BONTEMPI, Gianluca, DELORENZI, Mauro, PICCART, Martine J, SOTIRIOU, Christos, DESMEDT, Christine, LALLEMAND, Francoise, TUTT, Andrew M, GILLET, Cheryl, ELLIS, Paul, HARRIS, Adrian, BERGH, Jonas, FOEKENS, John A

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Cognitive Learning, Monitoring and Assistance of Industrial Workflows Using Egocentric Sensor Networks von Bleser, Gabriele, Damen, Dima, Behera, Ardhendu, Hendeby, Gustaf, Mura, Katharina, Miezal, Markus, Gee, Andrew, Petersen, Nils, Maçães, Gustavo, Domingues, Hugo, Gorecky, Dominic, Almeida, Luis, Mayol-Cuevas, Walterio, Calway, Andrew, Cohn, Anthony G, Hogg, David C, Stricker, Didier

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Improving Infinium MethylationEPIC data processing: re-annotation of enhancers and long noncoding RNA genes and benchmarking of normalization methods von Bizet, Martin, Defrance, Matthieu, Calonne, Emilie, Bontempi, Gianluca, Sotiriou, Christos, Fuks, François, Jeschke, Jana

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