TET Proteins and DNA Demethylation: Methods and Protocols von Bogdanovic, Ozren, Vermeulen, Michiel

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Amphioxus functional genomics and the origins of vertebrate gene regulation von Marletaz, F, Firbas, PN, Maeso, I, Tena, JJ, Bogdanovic, O, Perry, M, Wyatt, CDR, De la Calle-Mustienes, E, Bertrand, S, Burguera, D, Acemel, RD, Van Heeringen, SJ, Naranjo, S, Herrera-Ubeda, C, Skvortsova, K, Jimenez-Gancedo, S, Aldea, D, Marquez, Y, Buono, L, Kozmikova, I, Permanyer, J, Louis, A, Albuixech-Crespo, B, Le Petillon, Y, Leon, A, Subirana, L, Balwierz, PJ, Duckett, PE, Farahani, E, Aury, J-M, Mangenot, S, Wincker, P, Albalat, R, Benito-Gutierrez, E, Canestro, C, Castro, F, D'Aniello, S, Ferrier, DEK, Huang, S, Laudet, V, Marais, GAB, Pontarotti, P, Schubert, M, Seitz, H, Somorjai, I, Takahashi, T, Mirabeau, O, Xu, A, Yu, J-K, Carninci, P, Ramon Martinez-Morales, J, Crollius, HR, Kozmik, Z, Weirauch, MT, Garcia-Fernandez, J, Lister, R, Lenhard, B, Holland, PWH, Escriva, H, Luis Gomez-Skarmeta, J, Irimia, M

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TET enzymes, DNA demethylation and pluripotency von Ross, SE, Bogdanovic, O

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The little skate genome and the evolutionary emergence of wing-like fins von Marlétaz, F, de la Calle-Mustienes, E, Acemel, RD, Paliou, C, Naranjo, S, Martínez-García, PM, Cases, I, Sleight, VA, Hirschberger, C, Marcet-Houben, M, Navon, D, Andrescavage, A, Skvortsova, K, Duckett, PE, González-Rajal, Á, Bogdanovic, O, Gibcus, JH, Yang, L, Gallardo-Fuentes, L, Sospedra, I, Lopez-Rios, J, Darbellay, F, Visel, A, Dekker, J, Shubin, N, Gabaldón, T, Nakamura, T, Tena, JJ, Lupiáñez, DG, Rokhsar, DS, Gómez-Skarmeta, JL

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Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements von Baranasic, D, Hörtenhuber, M, Balwierz, PJ, Zehnder, T, Mukarram, AK, Nepal, C, Várnai, C, Hadzhiev, Y, Jimenez-Gonzalez, A, Li, N, Wragg, J, D’Orazio, FM, Relic, D, Pachkov, M, Díaz, N, Hernández-Rodríguez, B, Chen, Z, Stoiber, M, Dong, M, Stevens, I, Ross, SE, Eagle, A, Martin, R, Obasaju, O, Rastegar, S, McGarvey, AC, Kopp, W, Chambers, E, Wang, D, Kim, HR, Acemel, RD, Naranjo, S, Łapiński, M, Chong, V, Mathavan, S, Peers, B, Sauka-Spengler, T, Vingron, M, Carninci, P, Ohler, U, Lacadie, SA, Burgess, SM, Winata, C, van Eeden, F, Vaquerizas, JM, Gómez-Skarmeta, JL, Onichtchouk, D, Brown, BJ, Bogdanovic, O, van Nimwegen, E, Westerfield, M, Wardle, FC, Daub, CO, Lenhard, B, Müller, F

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Amphioxus functional genomics and the origins of vertebrate gene regulation von Marletaz, F, Firbas, PN, Maeso, I, Tena, JJ, Bogdanovic, O, Perry, M, Wyatt, CDR, de la Calle-Mustienes, E, Bertrand, S, Burguera, D, Acemel, RD, van Heeringen, SJ, Naranjo, S, Herrera-Ubeda, C, Skvortsova, K, Jimenez-Gancedo, S, Aldea, D, Marquez, Y, Buono, L, Kozmikova, I, Permanyer, J, Louis, A, Albuixech-Crespo, B, Le Petillon, Y, Leon, A, Subirana, L, Balwierz, PJ, Duckett, PE, Farahani, E, Aury, J-M, Mangenot, S, Wincker, P, Albalat, R, Benito-Gutierrez, E, Canestro, C, Castro, F, D'Aniello, S, Ferrier, DEK, Huang, S, Laudet, V, Marais, GAB, Pontarotti, P, Schubert, M, Seitz, H, Somorjai, I, Takahashi, T, Mirabeau, O, Xu, A, Yu, J-K, Carninci, P, Ramon Martinez-Morales, J, Crollius, HR, Kozmik, Z, Weirauch, MT, Garcia-Fernandez, J, Lister, R, Lenhard, B, Holland, PWH, Escriva, H, Luis Gomez-Skarmeta, J, Irimia, M

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Covid-19 in patients with chronic lymphocytic leukemia: clinical outcome and B- and T-cell immunity during 13 months in consecutive patients von Blixt, Lisa, Bogdanovic, Gordana, Buggert, Marcus, Gao, Yu, Hober, Sophia, Healy, Katie, Johansson, Hemming, Kjellander, Christian, Mravinacova, Sara, Muschiol, Sandra, Nilsson, Peter, Palma, Marzia, Pin, Elisa, Smith, C. I. Edvard, Stromberg, Olga, Sällberg Chen, Margaret, Zain, Rula, Hansson, Lotta, Österborg, Anders

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Limb Graft Occlusion Following Endovascular Aneurysm Repair for Infrarenal Abdominal Aortic Aneurysm with the Zenith Alpha, Excluder, and Endurant Devices: a Multicentre Cohort Stu... von Bogdanovic, Marko, Stackelberg, Otto, Lindström, David, Ersryd, Samuel, Andersson, Manne, Roos, Håkan, Siika, Antti, Jonsson, Magnus, Roy, Joy

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Monoamine oxidase B is elevated in Alzheimer disease neurons, is associated with γ-secretase and regulates neuronal amyloid β-peptide levels von Schedin-Weiss, Sophia, Inoue, Mitsuhiro, Hromadkova, Lenka, Teranishi, Yasuhiro, Yamamoto, Natsuko Goto, Wiehager, Birgitta, Bogdanovic, Nenad, Winblad, Bengt, Sandebring-Matton, Anna, Frykman, Susanne, Tjernberg, Lars O

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Investigation of the possibility of copper recovery from the flotation tailings by acid leaching von Antonijević, M.M., Dimitrijević, M.D., Stevanović, Z.O., Serbula, S.M., Bogdanovic, G.D.

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Mutations in 12 known dominant disease-causing genes clarify many congenital anomalies of the kidney and urinary tract von Hwang, Daw-Yang, Dworschak, Gabriel C., Kohl, Stefan, Saisawat, Pawaree, Vivante, Asaf, Hilger, Alina C., Reutter, Heiko M., Soliman, Neveen A., Bogdanovic, Radovan, Kehinde, Elijah O., Tasic, Velibor, Hildebrandt, Friedhelm

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Association of IL1RAP-related genetic variation with cerebrospinal fluid concentration of Alzheimer-associated tau protein von Zettergren, Anna, Höglund, Kina, Kern, Silke, Thorvaldsson, Valgeir, Johan Skoog, Msc, Hansson, Oskar, Andreasen, Niels, Bogdanovic, Nenad, Blennow, Kaj, Skoog, Ingmar, Zetterberg, Henrik

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Loss-of-function variants in ABCA7 confer risk of Alzheimer's disease von Steinberg, Stacy, Stefansson, Hreinn, Jonsson, Thorlakur, Johannsdottir, Hrefna, Ingason, Andres, Helgason, Hannes, Sulem, Patrick, Magnusson, Olafur Th, Gudjonsson, Sigurjon A, Unnsteinsdottir, Unnur, Kong, Augustine, Helisalmi, Seppo, Soininen, Hilkka, Lah, James J, Aarsland, Dag, Fladby, Tormod, Ulstein, Ingun D, Djurovic, Srdjan, Sando, Sigrid B, White, Linda R, Knudsen, Gun-Peggy, Westlye, Lars T, Selbæk, Geir, Giegling, Ina, Hampel, Harald, Hiltunen, Mikko, Levey, Allan I, Andreassen, Ole A, Rujescu, Dan, Jonsson, Palmi V, Bjornsson, Sigurbjorn, Snaedal, Jon, Stefansson, Kari

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Nonsteroidal Anti-Inflammatory Drugs Repress β-Secretase Gene Promoter Activity by the Activation of PPARγ von Sastre, Magdalena, Dewachter, Ilse, Rossner, Steffen, Bogdanovic, Nenad, Rosen, Evan, Borghgraef, Peter, Evert, Bernd O., Dumitrescu-Ozimek, Lucia, Thal, Dietmar R., Landreth, Gary, Walter, Jochen, Klockgether, Thomas, van Leuven, Fred, Heneka, Michael T.

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Immunodeficiency syndromes differentially impact the functional profile of SARS-CoV-2-specific T cells elicited by mRNA vaccination von Gao, Yu, Cai, Curtis, Wullimann, David, Niessl, Julia, Rivera-Ballesteros, Olga, Chen, Puran, Lange, Joshua, Cuapio, Angelica, Blennow, Ola, Hansson, Lotta, Mielke, Stephan, Nowak, Piotr, Vesterbacka, Jan, Akber, Mira, Perez-Potti, Andre, Sekine, Takuya, Müller, Thomas R., Boulouis, Caroline, Kammann, Tobias, Parrot, Tiphaine, Muvva, Jagadeeswara Rao, Sobkowiak, Michal, Healy, Katie, Bogdanovic, Gordana, Muschiol, Sandra, Söderdahl, Gunnar, Österborg, Anders, Hellgren, Fredrika, Grifoni, Alba, Weiskopf, Daniela, Sette, Alessandro, Loré, Karin, Sällberg Chen, Margaret, Ljungman, Per, Sandberg, Johan K., Smith, C.I. Edvard, Bergman, Peter, Ljunggren, Hans-Gustaf, Aleman, Soo, Buggert, Marcus

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Safety and efficacy of the mRNA BNT162b2 vaccine against SARS-CoV-2 in five groups of immunocompromised patients and healthy controls in a prospective open-label clinical trial von Bergman, Peter, Blennow, Ola, Hansson, Lotta, Mielke, Stephan, Nowak, Piotr, Chen, Puran, Söderdahl, Gunnar, Österborg, Anders, Smith, C. I. Edvard, Wullimann, David, Vesterbacka, Jan, Lindgren, Gustaf, Blixt, Lisa, Friman, Gustav, Wahren-Borgström, Emilie, Nordlander, Anna, Gomez, Angelica Cuapio, Akber, Mira, Valentini, Davide, Norlin, Anna-Carin, Thalme, Anders, Bogdanovic, Gordana, Muschiol, Sandra, Nilsson, Peter, Hober, Sophia, Loré, Karin, Chen, Margaret Sällberg, Buggert, Marcus, Ljunggren, Hans-Gustaf, Ljungman, Per, Aleman, Soo

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Systemic and mucosal adaptive immunity to SARS-CoV-2 during the Omicron wave in patients with chronic lymphocytic leukemia von Ingelman-Sundberg, Hanna M, Blixt, Lisa, Wullimann, David, Wu, Jinghua, Gao, Yu, Healy, Katie, Muschiol, Sandra, Bogdanovic, Gordana, Åberg, Mikael, Kjellander, Christian, Grifoni, Alba, Sette, Alessandro, Aleman, Soo, Chen, Puran, Blennow, Ola, Hansson, Lotta, Ljunggren, Hans-Gustaf, Chen, Margaret Sällberg, Buggert, Marcus, Österborg, Anders

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Microdissected Pyramidal Cell Proteomics of Alzheimer Brain Reveals Alterations in Creatine Kinase B-Type, 14-3-3-gamma, and Heat Shock Cognate 71 von Sandebring-Matton, Anna, Axenhus, Michael, Bogdanovic, Nenad, Winblad, Bengt, Schedin-Weiss, Sophia, Nilsson, Per, Tjernberg, Lars O.

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Blood-brain barrier alterations in ageing and dementia von Popescu, Bogdan O, Toescu, Emil C, Popescu, Laurenţiu M, Bajenaru, Ovidiu, Muresanu, Dafin F, Schultzberg, Marianne, Bogdanovic, Nenad

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The Proteome of the Dentate Terminal Zone of the Perforant Path Indicates Presynaptic Impairment in Alzheimer Disease von Haytural, Hazal, Mermelekas, Georgios, Emre, Ceren, Nigam, Saket Milind, Carroll, Steven L., Winblad, Bengt, Bogdanovic, Nenad, Barthet, Gaël, Granholm, Ann-Charlotte, Orre, Lukas M., Tjernberg, Lars O., Frykman, Susanne

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