Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma von Borad, Mitesh J, Champion, Mia D, Egan, Jan B, Liang, Winnie S, Fonseca, Rafael, Bryce, Alan H, McCullough, Ann E, Barrett, Michael T, Hunt, Katherine, Patel, Maitray D, Young, Scott W, Collins, Joseph M, Silva, Alvin C, Condjella, Rachel M, Block, Matthew, McWilliams, Robert R, Lazaridis, Konstantinos N, Klee, Eric W, Bible, Keith C, Harris, Pamela, Oliver, Gavin R, Bhavsar, Jaysheel D, Nair, Asha A, Middha, Sumit, Asmann, Yan, Kocher, Jean-Pierre, Schahl, Kimberly, Kipp, Benjamin R, Barr Fritcher, Emily G, Baker, Angela, Aldrich, Jessica, Kurdoglu, Ahmet, Izatt, Tyler, Christoforides, Alexis, Cherni, Irene, Nasser, Sara, Reiman, Rebecca, Phillips, Lori, McDonald, Jackie, Adkins, Jonathan, Mastrian, Stephen D, Placek, Pamela, Watanabe, Aprill T, Lobello, Janine, Han, Haiyong, Von Hoff, Daniel, Craig, David W, Stewart, A Keith, Carpten, John D

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MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing von Kalari, Krishna R, Nair, Asha A, Bhavsar, Jaysheel D, O'Brien, Daniel R, Davila, Jaime I, Bockol, Matthew A, Nie, Jinfu, Tang, Xiaojia, Baheti, Saurabh, Doughty, Jay B, Middha, Sumit, Sicotte, Hugues, Thompson, Aubrey E, Asmann, Yan W, Kocher, Jean-Pierre A

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Metagenomics: Read Length Matters von Wommack, K. Eric, Bhavsar, Jaysheel, Ravel, Jacques

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SoftSearch: integration of multiple sequence features to identify breakpoints of structural variations von Hart, Steven N, Sarangi, Vivekananda, Moore, Raymond, Baheti, Saurabh, Bhavsar, Jaysheel D, Couch, Fergus J, Kocher, Jean-Pierre A

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IM-TORNADO: a tool for comparison of 16S reads from paired-end libraries von Jeraldo, Patricio, Kalari, Krishna, Chen, Xianfeng, Bhavsar, Jaysheel, Mangalam, Ashutosh, White, Bryan, Nelson, Heidi, Kocher, Jean-Pierre, Chia, Nicholas

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A long-term high-fat diet induces differential gene expression changes in spatially distinct adipose tissue of male mice von Alradi, Malak, Askari, Hassan, Shaw, Mark, Bhavsar, Jaysheel D, Kingham, Brewster F, Polson, Shawn W, Fancher, Ibra S

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CRISPR Spacers Indicate Preferential Matching of Specific Virioplankton Genes von Nasko, Daniel J, Ferrell, Barbra D, Moore, Ryan M, Bhavsar, Jaysheel D, Polson, Shawn W, Wommack, K Eric

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Deletion of Fibroblast growth factor 9 globally and in skeletal muscle results in enlarged tuberosities at sites of deltoid tendon attachments von Leek, Connor C., Soulas, Jaclyn M., Bhattacharya, Iman, Ganji, Elahe, Locke, Ryan C., Smith, Megan C., Bhavsar, Jaysheel D., Polson, Shawn W., Ornitz, David M., Killian, Megan L.

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Core Analysis Viewer: Simplifying Omics Data Delivery, Training, and Interpretation von Polson, Shawn W, Zheng, Longqian, Bhavsar, Jaysheel D

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Phages across the biosphere: contrasts of viruses in soil and aquatic environments von Srinivasiah, Sharath, Bhavsar, Jaysheel, Thapar, Kanika, Liles, Mark, Schoenfeld, Tom, Wommack, K. Eric

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Direct Assessment of Viral Diversity in Soils by Random PCR Amplification of Polymorphic DNA von SRINIVASIAH, Sharath, LOVETT, Jacqueline, POLSON, Shawn, BHAVSAR, Jaysheel, GHOSH, Dhritiman, ROY, Krishnakali, FUHRMANN, Jeffry J, RADOSEVICH, Mark, WOMMACK, K. Eric

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Census of the Viral Metagenome within an Activated Sludge Microbial Assemblage von Parsley, Larissa C, Consuegra, Erin J, Thomas, Stephen J, Bhavsar, Jaysheel, Land, Andrew M, Bhuiyan, Nadia N, Mazher, Mustafa A, Waters, Robert J, Wommack, K. Eric, Harper, Willie F. Jr, Liles, Mark R

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miR-31-mediated local translation at the mitotic spindle is important for early development von Remsburg, Carolyn M, Konrad, Kalin D, Testa, Michael D, Stepicheva, Nadezda, Lee, Kelvin, Choe, Leila H, Polson, Shawn, Bhavsar, Jaysheel, Huang, Hongzhan, Song, Jia L

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VIROME: a standard operating procedure for analysis of viral metagenome sequences von Wommack, K Eric, Bhavsar, Jaysheel, Polson, Shawn W, Chen, Jing, Dumas, Michael, Srinivasiah, Sharath, Furman, Megan, Jamindar, Sanchita, Nasko, Daniel J

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Light Modulates the Physiology of Nonphototrophic Actinobacteria von Maresca, Julia A, Keffer, Jessica L, Hempel, Priscilla P, Polson, Shawn W, Shevchenko, Olga, Bhavsar, Jaysheel, Powell, Deborah, Miller, Kelsey J, Singh, Archana, Hahn, Martin W

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Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum von Veluchamy, Alaguraj, Lin, Xin, Maumus, Florian, Rivarola, Maximo, Bhavsar, Jaysheel, Creasy, Todd, O’Brien, Kimberly, Sengamalay, Naomi A., Tallon, Luke J., Smith, Andrew D., Rayko, Edda, Ahmed, Ikhlak, Crom, Stéphane Le, Farrant, Gregory K., Sgro, Jean-Yves, Olson, Sue A., Bondurant, Sandra Splinter, Allen, Andrew E., Rabinowicz, Pablo D., Sussman, Michael R., Bowler, Chris, Tirichine, Leïla

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Correction: Corrigendum: Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum von Veluchamy, Alaguraj, Lin, Xin, Maumus, Florian, Rivarola, Maximo, Bhavsar, Jaysheel, Creasy, Todd, O’Brien, Kimberly, Sengamalay, Naomi A., Tallon, Luke J., Smith, Andrew D., Rayko, Edda, Ahmed, Ikhlak, Crom, Stéphane Le, Farrant, Gregory K., Sgro, Jean-Yves, Olson, Sue A., Bondurant, Sandra Splinter, Allen, Andrew E., Rabinowicz, Pablo D., Sussman, Michael R., Bowler, Chris, Tirichine, Leïla

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Corrigendum: Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum von Veluchamy, Alaguraj, Lin, Xin, Maumus, Florian, Rivarola, Maximo, Bhavsar, Jaysheel, Creasy, Todd, O'brien, Kimberly, Sengamalay, Naomi A, Tallon, Luke J, Smith, Andrew D, Rayko, Edda, Ahmed, Ikhlak, Crom, Stéphane Le, Farrant, Gregory K, Sgro, Jean-yves, Olson, Sue A, Bondurant, Sandra Splinter, Allen, Andrew E, Rabinowicz, Pablo D, Sussman, Michael R, Bowler, Chris, Tirichine, Leïla

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Integrated Genomic Characterization Reveals Novel, Therapeutically Relevant Drug Targets in FGFR and EGFR Pathways in Sporadic Intrahepatic Cholangiocarcinoma: e1004135 von Borad, Mitesh J, Champion, Mia D, Egan, Jan B, Liang, Winnie S, Fonseca, Rafael, Bryce, Alan H, McCullough, Ann E, Barrett, Michael T, Hunt, Katherine, Patel, Maitray D, Young, Scott W, Collins, Joseph M, Silva, Alvin C, Condjella, Rachel M, Block, Matthew, McWilliams, Robert R, Lazaridis, Konstantinos N, Klee, Eric W, Bible, Keith C, Harris, Pamela, Oliver, Gavin R, Bhavsar, Jaysheel D, Nair, Asha A, Middha, Sumit, Asmann, Yan, Kocher, Jean-Pierre, Schahl, Kimberly, Kipp, Benjamin R, Fritcher, Emily GBarr, Baker, Angela, Aldrich, Jessica, Kurdoglu, Ahmet, Izatt, Tyler, Christoforides, Alexis, Cherni, Irene, Nasser, Sara, Reiman, Rebecca, Phillips, Lori, McDonald, Jackie, Adkins, Jonathan, Mastrian, Stephen D, Placek, Pamela, Watanabe, Aprill T, LoBello, Janine, Han, Haiyong, Hoff, Daniel Von, Craig, David W, Stewart, A Keith, Carpten, John D

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Isolation Independent Methods of Characterizing Phage Communities 2: Characterizing a Metagenome von Wommack, K. Eric, Bench, Shellie R., Bhavsar, Jaysheel, Mead, David, Hanson, Tom

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