Discovery of drug mode of action and drug repositioning from transcriptional responses von Iorio, Francesco, Bosotti, Roberta, Scacheri, Emanuela, Belcastro, Vincenzo, Mithbaokar, Pratibha, Ferriero, Rosa, Murino, Loredana, Tagliaferri, Roberto, Brunetti-Pierri, Nicola, Isacchi, Antonella, Bernardo, Diego di, Cantor, Charles R.

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Impaired mitophagy links mitochondrial disease to epithelial stress in methylmalonyl-CoA mutase deficiency von Luciani, Alessandro, Schumann, Anke, Berquez, Marine, Chen, Zhiyong, Nieri, Daniela, Failli, Mario, Debaix, Huguette, Festa, Beatrice Paola, Tokonami, Natsuko, Raimondi, Andrea, Cremonesi, Alessio, Carrella, Diego, Forny, Patrick, Kölker, Stefan, Diomedi Camassei, Francesca, Diaz, Francisca, Moraes, Carlos T., Di Bernardo, Diego, Baumgartner, Matthias R., Devuyst, Olivier

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High-resolution analysis of the human retina miRNome reveals isomiR variations and novel microRNAs von Karali, Marianthi, Persico, Maria, Mutarelli, Margherita, Carissimo, Annamaria, Pizzo, Mariateresa, Singh Marwah, Veer, Ambrosio, Concetta, Pinelli, Michele, Carrella, Diego, Ferrari, Stefano, Ponzin, Diego, Nigro, Vincenzo, di Bernardo, Diego, Banfi, Sandro

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Automatic synchronisation of the cell cycle in budding yeast through closed-loop feedback control von Perrino, Giansimone, Napolitano, Sara, Galdi, Francesca, La Regina, Antonella, Fiore, Davide, Giuliano, Teresa, di Bernardo, Mario, di Bernardo, Diego

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In Silico Modeling of Liver Metabolism in a Human Disease Reveals a Key Enzyme for Histidine and Histamine Homeostasis von Pagliarini, Roberto, Castello, Raffaele, Napolitano, Francesco, Borzone, Roberta, Annunziata, Patrizia, Mandrile, Giorgia, De Marchi, Mario, Brunetti-Pierri, Nicola, di Bernardo, Diego

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Identifying network of drug mode of action by gene expression profiling von Iorio, Francesco, Tagliaferri, Roberto, di Bernardo, Diego

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Predictive Signatures Inform the Effective Repurposing of Decitabine to Treat KRAS-Dependent Pancreatic Ductal Adenocarcinoma von Mottini, Carla, Tomihara, Hideo, Carrella, Diego, Lamolinara, Alessia, Iezzi, Manuela, Huang, Justin K, Amoreo, Carla A, Buglioni, Simonetta, Manni, Isabella, Robinson, Frederick S, Minelli, Rosalba, Kang, Ya'an, Fleming, Jason B, Kim, Michael P, Bristow, Christopher A, Trisciuoglio, Daniela, Iuliano, Antonella, Del Bufalo, Donatella, Di Bernardo, Diego, Melisi, Davide, Draetta, Giulio F, Ciliberto, Gennaro, Carugo, Alessandro, Cardone, Luca

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Chemogenomic profiling on a genome-wide scale using reverse-engineered gene networks von di Bernardo, Diego, Thompson, Michael J, Gardner, Timothy S, Chobot, Sarah E, Eastwood, Erin L, Wojtovich, Andrew P, Elliott, Sean J, Schaus, Scott E, Collins, James J

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Author Correction: Impaired mitophagy links mitochondrial disease to epithelial stress in methylmalonyl-CoA mutase deficiency von Luciani, Alessandro, Schumann, Anke, Berquez, Marine, Chen, Zhiyong, Nieri, Daniela, Failli, Mario, Debaix, Huguette, Festa, Beatrice Paola, Tokonami, Natsuko, Raimondi, Andrea, Cremonesi, Alessio, Carrella, Diego, Forny, Patrick, Kölker, Stefan, Camassei, Francesca Diomedi, Diaz, Francisca, Moraes, Carlos T., Di Bernardo, Diego, Baumgartner, Matthias R., Devuyst, Olivier

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Engineering a synthetic gene circuit for high-performance inducible expression in mammalian systems von De Carluccio, Giuliano, Fusco, Virginia, di Bernardo, Diego

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How to infer gene networks from expression profiles von Bansal, Mukesh, Belcastro, Vincenzo, Ambesi‐Impiombato, Alberto, di Bernardo, Diego

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TFEB controls cellular lipid metabolism through a starvation-induced autoregulatory loop von Settembre, Carmine, De Cegli, Rossella, Mansueto, Gelsomina, Saha, Pradip K., Vetrini, Francesco, Visvikis, Orane, Huynh, Tuong, Carissimo, Annamaria, Palmer, Donna, Jürgen Klisch, Tiemo, Wollenberg, Amanda C., Di Bernardo, Diego, Chan, Lawrence, Irazoqui, Javier E., Ballabio, Andrea

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Analysis of inhibitors of the anoctamin‐1 chloride channel (transmembrane member 16A, TMEM16A) reveals indirect mechanisms involving alterations in calcium signalling von Genovese, Michele, Buccirossi, Martina, Guidone, Daniela, De Cegli, Rossella, Sarnataro, Sergio, Bernardo, Diego, Galietta, Luis J. V.

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Intrinsic Abnormalities of Cystic Fibrosis Airway Connective Tissue Revealed by an In Vitro 3D Stromal Model von Mazio, Claudia, Scognamiglio, Laura S, De Cegli, Rossella, Galietta, Luis J V, Bernardo, Diego Di, Casale, Costantino, Urciuolo, Francesco, Imparato, Giorgia, Netti, Paolo A

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A Yeast Synthetic Network for In Vivo Assessment of Reverse-Engineering and Modeling Approaches von Cantone, Irene, Marucci, Lucia, Iorio, Francesco, Ricci, Maria Aurelia, Belcastro, Vincenzo, Bansal, Mukesh, Santini, Stefania, di Bernardo, Mario, di Bernardo, Diego, Cosma, Maria Pia

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In-vivo real-time control of protein expression from endogenous and synthetic gene networks von Menolascina, Filippo, Fiore, Gianfranco, Orabona, Emanuele, De Stefano, Luca, Ferry, Mike, Hasty, Jeff, di Bernardo, Mario, di Bernardo, Diego

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Quantitative Characterization of α-Synuclein Aggregation in Living Cells through Automated Microfluidics Feedback Control von Perrino, Giansimone, Wilson, Cathal, Santorelli, Marco, di Bernardo, Diego

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gene2drug: a computational tool for pathway-based rational drug repositioning von Napolitano, Francesco, Carrella, Diego, Mandriani, Barbara, Pisonero-Vaquero, Sandra, Sirci, Francesco, Medina, Diego L, Brunetti-Pierri, Nicola, di Bernardo, Diego

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TRPV4 and purinergic receptor signalling pathways are separately linked in airway epithelia to CFTR and TMEM16A chloride channels von Genovese, Michele, Borrelli, Anna, Venturini, Arianna, Guidone, Daniela, Caci, Emanuela, Viscido, Gaetano, Gambardella, Gennaro, di Bernardo, Diego, Scudieri, Paolo, Galietta, Luis J.V.

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In Vivo Real-Time Control of Gene Expression: A Comparative Analysis of Feedback Control Strategies in Yeast von Fiore, Gianfranco, Perrino, Giansimone, di Bernardo, Mario, di Bernardo, Diego

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