Evolution of endemic and sylvatic lineages of dengue virus von Damodaran, Lambodhar, Bernardi Schneider, Adriano, Chen, Shi, Janies, Daniel

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Giardiasis as a neglected disease in Brazil: Systematic review of 20 years of publications von Coelho, Camila Henriques, Durigan, Maurício, Leal, Diego Averaldo Guiguet, Schneider, Adriano de Bernardi, Franco, Regina Maura Bueno, Singer, Steven M

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Musashi binding elements in Zika and related Flavivirus 3′UTRs: A comparative study in silico von Schneider, Adriano de Bernardi, Wolfinger, Michael T.

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Editorial: Phylogenetics in the one health context von Jacob Machado, Denis, Jiménez-Ferbans, Larry, Ocaña, Kary, de Bernardi Schneider, Adriano

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Updated Phylogeny of Chikungunya Virus Suggests Lineage-Specific RNA Architecture von Schneider, Adriano de Bernardi, Ochsenreiter, Roman, Hostager, Reilly, Hofacker, Ivo L, Janies, Daniel, Wolfinger, Michael T

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Molecular evolution of Zika virus as it crossed the Pacific to the Americas von Bernardi Schneider, Adriano, Malone, Robert W., Guo, Jun‐Tao, Homan, Jane, Linchangco, Gregorio, Witter, Zachary L., Vinesett, Dylan, Damodaran, Lambodhar, Janies, Daniel A.

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StrainHub: a phylogenetic tool to construct pathogen transmission networks von de Bernardi Schneider, Adriano, Ford, Colby T, Hostager, Reilly, Williams, John, Cioce, Michael, Çatalyürek, Ümit V, Wertheim, Joel O, Janies, Daniel

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Chromosome-anchored QTL conferring aluminum tolerance in hexaploid oat von Schneider, Adriano de Bernardi, Nava, Itamar Cristiano, Hervé, Cássio Barcellos, Islamovic, Emir, Limberger, Emerson, Jackson, Eric W., Delatorre, Carla Andrea

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Zika Virus: Medical Countermeasure Development Challenges von Malone, Robert W, Homan, Jane, Callahan, Michael V, Glasspool-Malone, Jill, Damodaran, Lambodhar, Schneider, Adriano De Bernardi, Zimler, Rebecca, Talton, James, Cobb, Ronald R, Ruzic, Ivan, Smith-Gagen, Julie, Janies, Daniel, Wilson, James

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Dynamic Molecular Epidemiology Reveals Lineage-Associated Single-Nucleotide Variants That Alter RNA Structure in Chikungunya Virus von Spicher, Thomas, Delitz, Markus, Schneider, Adriano de Bernardi, Wolfinger, Michael T

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Zika Fetal Neuropathogenesis: Etiology of a Viral Syndrome von Klase, Zachary A, Khakhina, Svetlana, Schneider, Adriano De Bernardi, Callahan, Michael V, Glasspool-Malone, Jill, Malone, Robert

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A framework for automated scalable designation of viral pathogen lineages from genomic data von McBroome, Jakob, de Bernardi Schneider, Adriano, Roemer, Cornelius, Wolfinger, Michael T., Hinrichs, Angie S., O’Toole, Aine Niamh, Ruis, Christopher, Turakhia, Yatish, Rambaut, Andrew, Corbett-Detig, Russell

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Optimizing ancestral trait reconstruction of large HIV Subtype C datasets through multiple-trait subsampling von Li, Xingguang, Trovão, Nídia S, Wertheim, Joel O, Baele, Guy, de Bernardi Schneider, Adriano

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Analysis of Hepatitis B Virus Genotype D in Greenland Suggests the Presence of a Novel Quasi-Subgenotype von de Bernardi Schneider, Adriano, Osiowy, Carla, Hostager, Reilly, Krarup, Henrik, Børresen, Malene, Tanaka, Yasuhito, Morriseau, Taylor, Wertheim, Joel O

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Prevalence of resistance-associated substitutions and phylogenetic analysis of hepatitis C virus infection in Russia von Isakov, Vasily, Hedskog, Charlotte, Wertheim, Joel O., Hostager, Reilly E., Parhy, Bandita, Schneider, Adriano De Bernardi, Suri, Vithika, Mo, Hongmei, Geivandova, Natalia, Morozov, Vyacheslav, Bessonova, Elena, Gankina, Natalya, Zhdanov, Konstantin, Abdurakhmanov, Dzhamal, Svarovskaia, Evguenia

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Aluminum-stress response in oat genotypes with monogenic tolerance von Castilhos, Graciela, Farias, Júlia Gomes, de Bernardi Schneider, Adriano, de Oliveira, Paulo Henrique, Nicoloso, Fernando Teixeira, Chitolina Schetinger, Maria Rosa, Delatorre, Carla Andréa

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FLAVi‐Web: A Web Annotator for Viral Genomes of Flaviviridae with a Revised Phylogeny of the Family von Guirales, Sayal, Machado, Denis Jacob, de Bernardi Schneider, Adriano, Janies, Daniel

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Identifying SARS-CoV-2 regional introductions and transmission clusters in real time von McBroome, Jakob, Martin, Jennifer, de Bernardi Schneider, Adriano, Turakhia, Yatish, Corbett-Detig, Russell

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SARS-CoV-2 lineage assignments using phylogenetic placement/UShER are superior to pangoLEARN machine-learning method von de Bernardi Schneider, Adriano, Su, Michelle, Hinrichs, Angie S, Wang, Jade, Amin, Helly, Bell, John, Wadford, Debra A, O'Toole, Áine, Scher, Emily, Perry, Marc D, Turakhia, Yatish, De Maio, Nicola, Hughes, Scott, Corbett-Detig, Russ

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Optimizing ancestral trait reconstruction of large HIV Subtype C datasets through multiple-trait subsampling von Li, Xingguang, Trovao, Nidia S, Wertheim, Joel O, Baele, Guy, Schneider, Adriano de Bernardi

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