ChIPnorm: a statistical method for normalizing and identifying differential regions in histone modification ChIP-seq libraries von Nair, Nishanth Ulhas, Sahu, Avinash Das, Bucher, Philipp, Moret, Bernard M E

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A maximum-likelihood approach for building cell-type trees by lifting von Nair, Nishanth Ulhas, Hunter, Laura, Shao, Mingfu, Grnarova, Paulina, Lin, Yu, Bucher, Philipp, E Moret, Bernard M

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Study of cell differentiation by phylogenetic analysis using histone modification data von Nair, Nishanth Ulhas, Lin, Yu, Manasovska, Ana, Antic, Jelena, Grnarova, Paulina, Sahu, Avinash Das, Bucher, Philipp, Moret, Bernard M E

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A Fast and Exact Algorithm for the Exemplar Breakpoint Distance von Shao, Mingfu, Moret, Bernard M E

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TIBA: a tool for phylogeny inference from rearrangement data with bootstrap analysis von YU LIN, RAJAN, Vaibhav, MORET, Bernard M. E

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A Metric for Phylogenetic Trees Based on Matching von Yu Lin, Rajan, V., Moret, B. M. E.

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Evaluating synteny for improved comparative studies von Ghiurcuta, Cristina G, Moret, Bernard M E

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How many bootstrap replicates are necessary? von Pattengale, Nicholas D, Alipour, Masoud, Bininda-Emonds, Olaf R P, Moret, Bernard M E, Stamatakis, Alexandros

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Inferring transcript phylogenies von Christinat, Yann, Moret, Bernard M E

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Inversion-based genomic signatures von Swenson, Krister M, Moret, Bernard M E

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Estimating true evolutionary distances under rearrangements, duplications, and losses von Lin, Yu, Rajan, Vaibhav, Swenson, Krister M, Moret, Bernard M E

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An Exact Algorithm to Compute the Double-Cut-and-Join Distance for Genomes with Duplicate Genes von Shao, Mingfu, Lin, Yu, Moret, Bernard M E

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Activity of voriconazole (UK-109,496) against clinical isolates of Aspergillus species and its effectiveness in an experimental model of invasive pulmonary aspergillosis von MURPHY, M, BERNARD, E. M, ISHIMARU, T, ARMSTRONG, D

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Algorithms in Bioinformatics: First International Workshop, WABI 2001 Århus Denmark, August 28–31, 2001 Proceedings von Gascuel, Olivier, Moret, Bernard M. E

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Sequence-Based Synteny Analysis of Multiple Large Genomes von Doerr, Daniel, Moret, Bernard M. E.

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A Transcript Perspective on Evolution von Christinat, Yann, Moret, Bernard M. E.

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Comparing genomes with rearrangements and segmental duplications von Shao, Mingfu, Moret, Bernard M E

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Gene rearrangement analysis and ancestral order inference from chloroplast genomes with inverted repeat von Yue, Feng, Cui, Liying, dePamphilis, Claude W, Moret, Bernard M E, Tang, Jijun

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Distance-based genome rearrangement phylogeny von Wang, Li-San, Warnow, Tandy, Moret, Bernard M E, Jansen, Robert K, Raubeson, Linda A

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Refining Regulatory Networks through Phylogenetic Transfer of Information von Xiuwei Zhang, Moret, B. M. E.

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